PATHWAY: rmai01100 Help Entry rmai01100                   Pathway                                 Name Metabolic pathways - Roseicyclus marinus Class BRITE hierarchy Pathway map rmai01100   Metabolic pathways Module rmai_M00001   Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:rmai01100] rmai_M00002   Glycolysis, core module involving three-carbon compounds [PATH:rmai01100] rmai_M00003   Gluconeogenesis, oxaloacetate => fructose-6P [PATH:rmai01100] rmai_M00004   Pentose phosphate pathway (Pentose phosphate cycle) [PATH:rmai01100] rmai_M00005   PRPP biosynthesis, ribose 5P => PRPP [PATH:rmai01100] rmai_M00006   Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:rmai01100] rmai_M00007   Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:rmai01100] rmai_M00008   Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:rmai01100] rmai_M00009   Citrate cycle (TCA cycle, Krebs cycle) [PATH:rmai01100] rmai_M00010   Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:rmai01100] rmai_M00011   Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:rmai01100] rmai_M00015   Proline biosynthesis, glutamate => proline [PATH:rmai01100] rmai_M00016   Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:rmai01100] rmai_M00017   Methionine biosynthesis, aspartate => homoserine => methionine [PATH:rmai01100] rmai_M00019   Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:rmai01100] rmai_M00020   Serine biosynthesis, glycerate-3P => serine [PATH:rmai01100] rmai_M00021   Cysteine biosynthesis, serine => cysteine [PATH:rmai01100] rmai_M00022   Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:rmai01100] rmai_M00023   Tryptophan biosynthesis, chorismate => tryptophan [PATH:rmai01100] rmai_M00024   Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine [PATH:rmai01100] rmai_M00028   Ornithine biosynthesis, glutamate => ornithine [PATH:rmai01100] rmai_M00040   Tyrosine biosynthesis, chorismate => arogenate => tyrosine [PATH:rmai01100] rmai_M00045   Histidine degradation, histidine => N-formiminoglutamate => glutamate [PATH:rmai01100] rmai_M00046   Pyrimidine degradation, uracil => beta-alanine, thymine => 3-aminoisobutanoate [PATH:rmai01100] rmai_M00048   De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:rmai01100] rmai_M00049   Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:rmai01100] rmai_M00050   Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:rmai01100] rmai_M00052   Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:rmai01100] rmai_M00061   D-Glucuronate degradation, D-glucuronate => pyruvate + D-glyceraldehyde 3P [PATH:rmai01100] rmai_M00063   CMP-KDO biosynthesis [PATH:rmai01100] rmai_M00082   Fatty acid biosynthesis, initiation [PATH:rmai01100] rmai_M00083   Fatty acid biosynthesis, elongation [PATH:rmai01100] rmai_M00086   beta-Oxidation, acyl-CoA synthesis [PATH:rmai01100] rmai_M00091   Phosphatidylcholine (PC) biosynthesis, PE => PC [PATH:rmai01100] rmai_M00096   C5 isoprenoid biosynthesis, non-mevalonate pathway [PATH:rmai01100] rmai_M00118   Glutathione biosynthesis, glutamate => glutathione [PATH:rmai01100] rmai_M00120   Coenzyme A biosynthesis, pantothenate => CoA [PATH:rmai01100] rmai_M00122   Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH:rmai01100] rmai_M00140   C1-unit interconversion, prokaryotes [PATH:rmai01100] rmai_M00144   NADH:quinone oxidoreductase, prokaryotes [PATH:rmai01100] rmai_M00149   Succinate dehydrogenase, prokaryotes [PATH:rmai01100] rmai_M00151   Cytochrome bc1 complex respiratory unit [PATH:rmai01100] rmai_M00155   Cytochrome c oxidase, prokaryotes [PATH:rmai01100] rmai_M00156   Cytochrome c oxidase, cbb3-type [PATH:rmai01100] rmai_M00157   F-type ATPase, prokaryotes and chloroplasts [PATH:rmai01100] rmai_M00169   CAM (Crassulacean acid metabolism), light [PATH:rmai01100] rmai_M00307   Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:rmai01100] rmai_M00364   C10-C20 isoprenoid biosynthesis, bacteria [PATH:rmai01100] rmai_M00373   Ethylmalonyl pathway [PATH:rmai01100] rmai_M00432   Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:rmai01100] rmai_M00551   Benzoate degradation, benzoate => catechol / methylbenzoate => methylcatechol [PATH:rmai01100] rmai_M00555   Betaine biosynthesis, choline => betaine [PATH:rmai01100] rmai_M00570   Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:rmai01100] rmai_M00595   Thiosulfate oxidation by SOX complex, thiosulfate => sulfate [PATH:rmai01100] rmai_M00621   Glycine cleavage system [PATH:rmai01100] rmai_M00741   Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA [PATH:rmai01100] rmai_M00793   dTDP-L-rhamnose biosynthesis [PATH:rmai01100] rmai_M00844   Arginine biosynthesis, ornithine => arginine [PATH:rmai01100] rmai_M00854   Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:rmai01100] rmai_M00880   Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:rmai01100] rmai_M00881   Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:rmai01100] rmai_M00899   Thiamine salvage pathway, HMP/HET => TMP [PATH:rmai01100] rmai_M00909   UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:rmai01100] rmai_M00925   Cobalamin biosynthesis, aerobic, uroporphyrinogen III => precorrin 2 => cobyrinate a,c-diamide [PATH:rmai01100] rmai_M00958   Adenine ribonucleotide degradation, AMP => Urate [PATH:rmai01100] rmai_M00959   Guanine ribonucleotide degradation, GMP => Urate [PATH:rmai01100] rmai_M00970   Proline degradation, proline => glutamate [PATH:rmai01100] Organism Roseicyclus marinus [GN:rmai] Related pathway rmai00010   Glycolysis / Gluconeogenesis rmai00020   Citrate cycle (TCA cycle) rmai00030   Pentose phosphate pathway rmai00040   Pentose and glucuronate interconversions rmai00051   Fructose and mannose metabolism rmai00052   Galactose metabolism rmai00053   Ascorbate and aldarate metabolism rmai00061   Fatty acid biosynthesis rmai00071   Fatty acid degradation rmai00121   Secondary bile acid biosynthesis rmai00130   Ubiquinone and other terpenoid-quinone biosynthesis rmai00190   Oxidative phosphorylation rmai00220   Arginine biosynthesis rmai00230   Purine metabolism rmai00240   Pyrimidine metabolism rmai00250   Alanine, aspartate and glutamate metabolism rmai00260   Glycine, serine and threonine metabolism rmai00261   Monobactam biosynthesis rmai00270   Cysteine and methionine metabolism rmai00280   Valine, leucine and isoleucine degradation rmai00290   Valine, leucine and isoleucine biosynthesis rmai00300   Lysine biosynthesis rmai00310   Lysine degradation rmai00330   Arginine and proline metabolism rmai00332   Carbapenem biosynthesis rmai00340   Histidine metabolism rmai00350   Tyrosine metabolism rmai00360   Phenylalanine metabolism rmai00361   Chlorocyclohexane and chlorobenzene degradation rmai00362   Benzoate degradation rmai00364   Fluorobenzoate degradation rmai00380   Tryptophan metabolism rmai00400   Phenylalanine, tyrosine and tryptophan biosynthesis rmai00401   Novobiocin biosynthesis rmai00405   Phenazine biosynthesis rmai00410   beta-Alanine metabolism rmai00430   Taurine and hypotaurine metabolism rmai00440   Phosphonate and phosphinate metabolism rmai00450   Selenocompound metabolism rmai00460   Cyanoamino acid metabolism rmai00470   D-Amino acid metabolism rmai00480   Glutathione metabolism rmai00500   Starch and sucrose metabolism rmai00520   Amino sugar and nucleotide sugar metabolism rmai00521   Streptomycin biosynthesis rmai00523   Polyketide sugar unit biosynthesis rmai00525   Acarbose and validamycin biosynthesis rmai00540   Lipopolysaccharide biosynthesis rmai00541   O-Antigen nucleotide sugar biosynthesis rmai00543   Exopolysaccharide biosynthesis rmai00550   Peptidoglycan biosynthesis rmai00552   Teichoic acid biosynthesis rmai00561   Glycerolipid metabolism rmai00562   Inositol phosphate metabolism rmai00564   Glycerophospholipid metabolism rmai00600   Sphingolipid metabolism rmai00620   Pyruvate metabolism rmai00622   Xylene degradation rmai00623   Toluene degradation rmai00625   Chloroalkane and chloroalkene degradation rmai00626   Naphthalene degradation rmai00627   Aminobenzoate degradation rmai00630   Glyoxylate and dicarboxylate metabolism rmai00640   Propanoate metabolism rmai00643   Styrene degradation rmai00650   Butanoate metabolism rmai00660   C5-Branched dibasic acid metabolism rmai00670   One carbon pool by folate rmai00680   Methane metabolism rmai00710   Carbon fixation by Calvin cycle rmai00720   Other carbon fixation pathways rmai00730   Thiamine metabolism rmai00740   Riboflavin metabolism rmai00750   Vitamin B6 metabolism rmai00760   Nicotinate and nicotinamide metabolism rmai00770   Pantothenate and CoA biosynthesis rmai00780   Biotin metabolism rmai00785   Lipoic acid metabolism rmai00790   Folate biosynthesis rmai00791   Atrazine degradation rmai00860   Porphyrin metabolism rmai00900   Terpenoid backbone biosynthesis rmai00903   Limonene degradation rmai00906   Carotenoid biosynthesis rmai00907   Pinene, camphor and geraniol degradation rmai00910   Nitrogen metabolism rmai00920   Sulfur metabolism rmai00930   Caprolactam degradation rmai00946   Degradation of flavonoids rmai00999   Biosynthesis of various plant secondary metabolites rmai01040   Biosynthesis of unsaturated fatty acids KO pathway ko01100     LinkDB All DBs

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