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Entry
Name
ABC transporters - Rhodospirillum rubrum ATCC 11170
Description
The ATP-binding cassette (ABC) transporters form one of the largest known protein families, and are widespread in bacteria, archaea, and eukaryotes. They couple ATP hydrolysis to active transport of a wide variety of substrates such as ions, sugars, lipids, sterols, peptides, proteins, and drugs. The structure of a prokaryotic ABC transporter usually consists of three components; typically two integral membrane proteins each having six transmembrane segments, two peripheral proteins that bind and hydrolyze ATP, and a periplasmic (or lipoprotein) substrate-binding protein. Many of the genes for the three components form operons as in fact observed in many bacterial and archaeal genomes. On the other hand, in a typical eukaryotic ABC transporter, the membrane spanning protein and the ATP-binding protein are fused, forming a multi-domain protein with the membrane-spanning domain (MSD) and the nucleotide-binding domain (NBD).
Class
Environmental Information Processing; Membrane transport
BRITE hierarchy
Pathway map
Ortholog table
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Organism
Rhodospirillum rubrum ATCC 11170 [GN:
rru ]
Gene
Rru_A1642 putative sulfonate/nitrate transport system substrate-binding protein [KO:K15598 ]
Rru_A1643 Binding-protein-dependent transport systems inner membrane component [KO:K15599 ]
Rru_A0704 Molybdenum ABC transporter, periplasmic binding protein [KO:K02020 ]
Rru_A3200 Binding-protein-dependent transport systems inner membrane component [KO:K02011 ]
Rru_A0768 Binding-protein-dependent transport systems inner membrane component [KO:K02011 ]
Rru_A3012 Binding-protein-dependent transport systems inner membrane component [KO:K11070 ]
Rru_A3013 Binding-protein-dependent transport systems inner membrane component [KO:K11071 ]
Rru_A1015 Binding-protein-dependent transport systems inner membrane component [KO:K11074 ]
Rru_A1016 Binding-protein-dependent transport systems inner membrane component [KO:K11075 ]
Rru_A2477 Substrate-binding region of ABC-type glycine betaine transport system [KO:K02002 ]
Rru_A2476 Binding-protein-dependent transport systems inner membrane component [KO:K02001 ]
Rru_A2385 Substrate-binding region of ABC-type glycine betaine transport system [KO:K05845 ]
Rru_A2382 Binding-protein-dependent transport systems inner membrane component [KO:K05846 ]
Rru_A2384 Binding-protein-dependent transport systems inner membrane component [KO:K05846 ]
Rru_A0093 Binding-protein-dependent transport systems inner membrane component [KO:K17316 ]
Rru_A0094 Binding-protein-dependent transport systems inner membrane component [KO:K17317 ]
Rru_A0247 Periplasmic binding protein/LacI transcriptional regulator [KO:K17205 ]
Rru_A0598 phosphate ABC transporter, periplasmic binding protein [KO:K02040 ]
Rru_A2089 Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [KO:K10002 ]
Rru_A2088 Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [KO:K10003 ]
Rru_A1004 Lysine-arginine-ornithine-binding periplasmic protein [KO:K09969 ]
Rru_A0780 Binding-protein-dependent transport systems inner membrane component [KO:K09970 ]
Rru_A1003 Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [KO:K09970 ]
Rru_A1002 Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [KO:K09971 ]
Rru_A0781 Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [KO:K09971 ]
Rru_A2252 Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [KO:K23056 ]
Rru_A2253 Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [KO:K23057 ]
Rru_A3506 putative branched-chain amino acid transport system substrate-binding protein [KO:K01999 ]
Rru_A2418 Binding-protein-dependent transport systems inner membrane component [KO:K02072 ]
Rru_A0789 Binding-protein-dependent transport systems inner membrane component [KO:K02072 ]
Rru_A0591 Binding-protein-dependent transport systems inner membrane component [KO:K15581 ]
Rru_A0590 Binding-protein-dependent transport systems inner membrane component [KO:K15582 ]
Rru_A0589 Oligopeptide/dipeptide ABC transporter, ATP-binding protein-like [KO:K15583 ]
Rru_A0588 Oligopeptide/dipeptide ABC transporter, ATP-binding protein-like [KO:K10823 ]
Rru_A2357 Binding-protein-dependent transport systems inner membrane component [KO:K12369 ]
Rru_A2358 Binding-protein-dependent transport systems inner membrane component [KO:K12370 ]
Rru_A2359 Oligopeptide/dipeptide ABC transporter, ATP-binding protein-like [KO:K12371 ]
Rru_A2360 Oligopeptide/dipeptide ABC transporter, ATP-binding protein-like [KO:K12372 ]
Rru_A2276 Binding-protein-dependent transport systems inner membrane component [KO:K15585 ]
Rru_A2275 Binding-protein-dependent transport systems inner membrane component [KO:K15586 ]
Rru_A3167 Binding-protein-dependent transport systems inner membrane component [KO:K13894 ]
Rru_A3168 Binding-protein-dependent transport systems inner membrane component [KO:K13895 ]
Rru_A1578 Lipoprotein releasing system, transmembrane protein, LolC/E family [KO:K09808 ]
Compound
C00093 sn-Glycerol 3-phosphate
C01153 Orthophosphoric monoester
C01181 4-Trimethylammoniobutanoate
C01279 4-Amino-5-hydroxymethyl-2-methylpyrimidine
C03557 2-Aminoethylphosphonate
C03611 Galactose oligosaccharide
C03619 Methyl beta-D-galactoside
C04114 (E)-4-(Trimethylammonio)but-2-enoate
C06705 Capsular polysaccharide
C19872 N-Formyl-4-amino-5-aminomethyl-2-methylpyrimidine
C20570 alpha-1,5-L-Arabinobiose
C20571 alpha-1,5-L-Arabinotriose
C20572 alpha-1,5-L-Arabinotetraose
Reference
Authors
Tomii K, Kanehisa M.
Title
A comparative analysis of ABC transporters in complete microbial genomes.
Journal
Reference
Authors
Sperandeo P, Lau FK, Carpentieri A, De Castro C, Molinaro A, Deho G, Silhavy TJ, Polissi A
Title
Functional analysis of the protein machinery required for transport of lipopolysaccharide to the outer membrane of Escherichia coli.
Journal
Reference
Authors
Ruiz N, Gronenberg LS, Kahne D, Silhavy TJ
Title
Identification of two inner-membrane proteins required for the transport of lipopolysaccharide to the outer membrane of Escherichia coli.
Journal
Reference
Authors
Omata T, Price GD, Badger MR, Okamura M, Gohta S, Ogawa T
Title
Identification of an ATP-binding cassette transporter involved in bicarbonate uptake in the cyanobacterium Synechococcus sp. strain PCC 7942.
Journal
Reference
Authors
Quintero MJ, Montesinos ML, Herrero A, Flores E
Title
Identification of genes encoding amino acid permeases by inactivation of selected ORFs from the Synechocystis genomic sequence.
Journal
Reference
Authors
Picossi S, Montesinos ML, Pernil R, Lichtle C, Herrero A, Flores E
Title
ABC-type neutral amino acid permease N-I is required for optimal diazotrophic growth and is repressed in the heterocysts of Anabaena sp. strain PCC 7120.
Journal
Reference
Authors
Valladares A, Montesinos ML, Herrero A, Flores E.
Title
An ABC-type, high-affinity urea permease identified in cyanobacteria.
Journal
Reference
Authors
Richard-Fogal CL, Frawley ER, Kranz RG
Title
Topology and function of CcmD in cytochrome c maturation.
Journal
Reference
Authors
Suzuki H, Koyanagi T, Izuka S, Onishi A, Kumagai H
Title
The yliA, -B, -C, and -D genes of Escherichia coli K-12 encode a novel glutathione importer with an ATP-binding cassette.
Journal
Reference
Authors
Novikova M, Metlitskaya A, Datsenko K, Kazakov T, Kazakov A, Wanner B, Severinov K
Title
The Escherichia coli Yej transporter is required for the uptake of translation inhibitor microcin C.
Journal
Reference
Authors
Tikhonova EB, Devroy VK, Lau SY, Zgurskaya HI
Title
Reconstitution of the Escherichia coli macrolide transporter: the periplasmic membrane fusion protein MacA stimulates the ATPase activity of MacB.
Journal
Reference
Authors
Yamanaka H, Kobayashi H, Takahashi E, Okamoto K
Title
MacAB is involved in the secretion of Escherichia coli heat-stable enterotoxin II.
Journal
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