PATHWAY: rtm01100 Help Entry rtm01100                    Pathway                                 Name Metabolic pathways - Rhodococcus triatomae Class BRITE hierarchy Pathway map rtm01100   Metabolic pathways Module rtm_M00001   Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:rtm01100] rtm_M00002   Glycolysis, core module involving three-carbon compounds [PATH:rtm01100] rtm_M00003   Gluconeogenesis, oxaloacetate => fructose-6P [PATH:rtm01100] rtm_M00004   Pentose phosphate pathway (Pentose phosphate cycle) [PATH:rtm01100] rtm_M00005   PRPP biosynthesis, ribose 5P => PRPP [PATH:rtm01100] rtm_M00006   Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:rtm01100] rtm_M00007   Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:rtm01100] rtm_M00009   Citrate cycle (TCA cycle, Krebs cycle) [PATH:rtm01100] rtm_M00010   Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:rtm01100] rtm_M00011   Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:rtm01100] rtm_M00015   Proline biosynthesis, glutamate => proline [PATH:rtm01100] rtm_M00016   Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:rtm01100] rtm_M00018   Threonine biosynthesis, aspartate => homoserine => threonine [PATH:rtm01100] rtm_M00019   Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:rtm01100] rtm_M00020   Serine biosynthesis, glycerate-3P => serine [PATH:rtm01100] rtm_M00021   Cysteine biosynthesis, serine => cysteine [PATH:rtm01100] rtm_M00026   Histidine biosynthesis, PRPP => histidine [PATH:rtm01100] rtm_M00027   GABA (gamma-Aminobutyrate) shunt [PATH:rtm01100] rtm_M00033   Ectoine biosynthesis, aspartate => ectoine [PATH:rtm01100] rtm_M00035   Methionine degradation [PATH:rtm01100] rtm_M00048   De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:rtm01100] rtm_M00049   Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:rtm01100] rtm_M00050   Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:rtm01100] rtm_M00052   Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:rtm01100] rtm_M00053   Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:rtm01100] rtm_M00082   Fatty acid biosynthesis, initiation [PATH:rtm01100] rtm_M00083   Fatty acid biosynthesis, elongation [PATH:rtm01100] rtm_M00086   beta-Oxidation, acyl-CoA synthesis [PATH:rtm01100] rtm_M00087   beta-Oxidation [PATH:rtm01100] rtm_M00093   Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:rtm01100] rtm_M00098   Acylglycerol degradation [PATH:rtm01100] rtm_M00115   NAD biosynthesis, aspartate => quinolinate => NAD [PATH:rtm01100] rtm_M00120   Coenzyme A biosynthesis, pantothenate => CoA [PATH:rtm01100] rtm_M00122   Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH:rtm01100] rtm_M00123   Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:rtm01100] rtm_M00126   Tetrahydrofolate biosynthesis, GTP => THF [PATH:rtm01100] rtm_M00149   Succinate dehydrogenase, prokaryotes [PATH:rtm01100] rtm_M00151   Cytochrome bc1 complex respiratory unit [PATH:rtm01100] rtm_M00155   Cytochrome c oxidase, prokaryotes [PATH:rtm01100] rtm_M00157   F-type ATPase, prokaryotes and chloroplasts [PATH:rtm01100] rtm_M00176   Assimilatory sulfate reduction, sulfate => H2S [PATH:rtm01100] rtm_M00307   Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:rtm01100] rtm_M00338   Cysteine biosynthesis, homocysteine + serine => cysteine [PATH:rtm01100] rtm_M00432   Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:rtm01100] rtm_M00530   Dissimilatory nitrate reduction, nitrate => ammonia [PATH:rtm01100] rtm_M00549   Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:rtm01100] rtm_M00555   Betaine biosynthesis, choline => betaine [PATH:rtm01100] rtm_M00570   Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:rtm01100] rtm_M00579   Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate [PATH:rtm01100] rtm_M00621   Glycine cleavage system [PATH:rtm01100] rtm_M00741   Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA [PATH:rtm01100] rtm_M00793   dTDP-L-rhamnose biosynthesis [PATH:rtm01100] rtm_M00844   Arginine biosynthesis, ornithine => arginine [PATH:rtm01100] rtm_M00846   Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH:rtm01100] rtm_M00854   Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:rtm01100] rtm_M00881   Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:rtm01100] rtm_M00909   UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:rtm01100] rtm_M00916   Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P [PATH:rtm01100] rtm_M00926   Heme biosynthesis, bacteria, glutamyl-tRNA => coproporphyrin III => heme [PATH:rtm01100] rtm_M00938   Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:rtm01100] rtm_M00970   Proline degradation, proline => glutamate [PATH:rtm01100] Organism Rhodococcus triatomae [GN:rtm] Related pathway rtm00010   Glycolysis / Gluconeogenesis rtm00020   Citrate cycle (TCA cycle) rtm00030   Pentose phosphate pathway rtm00040   Pentose and glucuronate interconversions rtm00051   Fructose and mannose metabolism rtm00052   Galactose metabolism rtm00053   Ascorbate and aldarate metabolism rtm00061   Fatty acid biosynthesis rtm00062   Fatty acid elongation rtm00071   Fatty acid degradation rtm00121   Secondary bile acid biosynthesis rtm00130   Ubiquinone and other terpenoid-quinone biosynthesis rtm00190   Oxidative phosphorylation rtm00220   Arginine biosynthesis rtm00230   Purine metabolism rtm00240   Pyrimidine metabolism rtm00250   Alanine, aspartate and glutamate metabolism rtm00260   Glycine, serine and threonine metabolism rtm00261   Monobactam biosynthesis rtm00270   Cysteine and methionine metabolism rtm00280   Valine, leucine and isoleucine degradation rtm00290   Valine, leucine and isoleucine biosynthesis rtm00300   Lysine biosynthesis rtm00310   Lysine degradation rtm00330   Arginine and proline metabolism rtm00332   Carbapenem biosynthesis rtm00340   Histidine metabolism rtm00350   Tyrosine metabolism rtm00360   Phenylalanine metabolism rtm00361   Chlorocyclohexane and chlorobenzene degradation rtm00362   Benzoate degradation rtm00364   Fluorobenzoate degradation rtm00380   Tryptophan metabolism rtm00400   Phenylalanine, tyrosine and tryptophan biosynthesis rtm00401   Novobiocin biosynthesis rtm00410   beta-Alanine metabolism rtm00430   Taurine and hypotaurine metabolism rtm00440   Phosphonate and phosphinate metabolism rtm00450   Selenocompound metabolism rtm00460   Cyanoamino acid metabolism rtm00470   D-Amino acid metabolism rtm00480   Glutathione metabolism rtm00500   Starch and sucrose metabolism rtm00514   Other types of O-glycan biosynthesis rtm00515   Mannose type O-glycan biosynthesis rtm00520   Amino sugar and nucleotide sugar metabolism rtm00521   Streptomycin biosynthesis rtm00523   Polyketide sugar unit biosynthesis rtm00525   Acarbose and validamycin biosynthesis rtm00541   O-Antigen nucleotide sugar biosynthesis rtm00542   O-Antigen repeat unit biosynthesis rtm00543   Exopolysaccharide biosynthesis rtm00550   Peptidoglycan biosynthesis rtm00552   Teichoic acid biosynthesis rtm00561   Glycerolipid metabolism rtm00562   Inositol phosphate metabolism rtm00564   Glycerophospholipid metabolism rtm00592   alpha-Linolenic acid metabolism rtm00600   Sphingolipid metabolism rtm00620   Pyruvate metabolism rtm00621   Dioxin degradation rtm00622   Xylene degradation rtm00623   Toluene degradation rtm00625   Chloroalkane and chloroalkene degradation rtm00626   Naphthalene degradation rtm00627   Aminobenzoate degradation rtm00630   Glyoxylate and dicarboxylate metabolism rtm00640   Propanoate metabolism rtm00643   Styrene degradation rtm00650   Butanoate metabolism rtm00660   C5-Branched dibasic acid metabolism rtm00670   One carbon pool by folate rtm00680   Methane metabolism rtm00710   Carbon fixation by Calvin cycle rtm00720   Other carbon fixation pathways rtm00730   Thiamine metabolism rtm00740   Riboflavin metabolism rtm00750   Vitamin B6 metabolism rtm00760   Nicotinate and nicotinamide metabolism rtm00770   Pantothenate and CoA biosynthesis rtm00780   Biotin metabolism rtm00785   Lipoic acid metabolism rtm00790   Folate biosynthesis rtm00791   Atrazine degradation rtm00860   Porphyrin metabolism rtm00900   Terpenoid backbone biosynthesis rtm00903   Limonene degradation rtm00906   Carotenoid biosynthesis rtm00907   Pinene, camphor and geraniol degradation rtm00910   Nitrogen metabolism rtm00920   Sulfur metabolism rtm00930   Caprolactam degradation rtm00946   Degradation of flavonoids rtm00984   Steroid degradation rtm00997   Biosynthesis of various other secondary metabolites rtm00999   Biosynthesis of various plant secondary metabolites rtm01040   Biosynthesis of unsaturated fatty acids rtm01053   Biosynthesis of siderophore group nonribosomal peptides rtm01059   Biosynthesis of enediyne antibiotics KO pathway ko01100     LinkDB All DBs

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