KEGG   PATHWAY: saur02010
Entry
saur02010                   Pathway                                
Name
ABC transporters - Staphylococcus aureus Bmb9393 (MRSA)
Description
The ATP-binding cassette (ABC) transporters form one of the largest known protein families, and are widespread in bacteria, archaea, and eukaryotes. They couple ATP hydrolysis to active transport of a wide variety of substrates such as ions, sugars, lipids, sterols, peptides, proteins, and drugs. The structure of a prokaryotic ABC transporter usually consists of three components; typically two integral membrane proteins each having six transmembrane segments, two peripheral proteins that bind and hydrolyze ATP, and a periplasmic (or lipoprotein) substrate-binding protein. Many of the genes for the three components form operons as in fact observed in many bacterial and archaeal genomes. On the other hand, in a typical eukaryotic ABC transporter, the membrane spanning protein and the ATP-binding protein are fused, forming a multi-domain protein with the membrane-spanning domain (MSD) and the nucleotide-binding domain (NBD).
Class
Environmental Information Processing; Membrane transport
Pathway map
saur02010  ABC transporters
saur02010

Other DBs
GO: 0043190 0043191 0043192
TC: 3.A.1
Organism
Staphylococcus aureus Bmb9393 (MRSA) [GN:saur]
Gene
SABB_01392  modA; molybdate transport system substrate-binding protein [KO:K02020]
SABB_01393  modB; molybdenum transport system permease protein [KO:K02018]
SABB_01394  modC; molybdenum import ATP-binding protein ModC [KO:K02017] [EC:7.3.2.5]
SABB_01066  Spermidine/putrescine-binding periplasmic protein [KO:K11069]
SABB_02949  potC; Spermidine/putrescine transport system permease protein PotC [KO:K11070]
SABB_02948  potB; spermidine/putrescine transport system permease protein PotB [KO:K11071]
SABB_01063  potA; Spermidine/putrescine import ATP-binding protein PotA [KO:K11072] [EC:7.6.2.11]
SABB_02635  transport system substrate-binding protein [KO:K05845 K05846]
SABB_01230  opuCC; Glycine betaine/carnitine/choline-binding protein [KO:K05845]
SABB_01231  opuCD; glycine betaine/carnitine/choline transport system permease protein opuCD [KO:K05846]
SABB_01229  opuCB; glycine betaine/carnitine/choline transport system permease protein opuCB [KO:K05846]
SABB_00772  osmoprotectant transport system ATP-binding protein [KO:K05847] [EC:7.6.2.9]
SABB_01228  opuCA; Glycine betaine/carnitine/choline transport ATP-binding protein OpuCA [KO:K05847] [EC:7.6.2.9]
SABB_01639  msmX; maltodextrin import ATP-binding protein MsmX [KO:K10112] [EC:7.5.2.-]
SABB_02699  Maltose/maltodextrin transport system substrate-binding protein [KO:K15770]
SABB_01635  Maltose/maltodextrin transport system permease protein [KO:K15772]
SABB_01581  rbsD; D-ribose pyranase [KO:K06726] [EC:5.4.99.62]
SABB_00124  pstS; Phosphate-binding protein [KO:K02040]
SABB_00125  phosphate transport system permease protein [KO:K02037]
SABB_00126  phosphate transport system permease protein [KO:K02038]
SABB_00127  pstB; Phosphate import ATP-binding protein PstB [KO:K02036] [EC:7.3.2.1]
SABB_01698  Phosphonate transport system substrate-binding protein [KO:K02044]
SABB_01700  Phosphonates transport system permease protein phnE [KO:K02042]
SABB_01701  Phosphonate transport system permease protein [KO:K02042]
SABB_01699  phnC; Phosphonates import ATP-binding protein PhnC [KO:K02041] [EC:7.3.2.2]
SABB_02996  Amino-acid ABC transporter-binding protein [KO:K02424]
SABB_01263  L-cystine transport system permease protein tcyB [KO:K10009]
SABB_01264  tcyC; L-cystine import ATP-binding protein TcyC [KO:K10010] [EC:7.4.2.1]
SABB_03150  Polar aminoacid transport system permease protein [KO:K17077 K23059]
SABB_01975  L-cystine import ATP-binding protein TcyC [KO:K23060] [EC:7.4.2.1]
SABB_04854  putative D-methionine-binding lipoprotein [KO:K02073]
SABB_00862  metQ; methionine-binding lipoprotein MetQ [KO:K02073]
SABB_02173  D-methionine transport system permease protein [KO:K02072]
SABB_00861  metI; methionine import system permease protein MetI [KO:K02072]
SABB_02174  metN1; Methionine import ATP-binding protein MetN 1 [KO:K02071]
SABB_00860  metN2; methionine import ATP-binding protein MetN 2 [KO:K02071]
SABB_00957  peptide/nickel transport system substrate-binding protein [KO:K15580]
SABB_00953  oppB; Oligopeptide transport system permease protein oppB [KO:K15581]
SABB_00954  peptide/nickel transport system permease protein [KO:K15582]
SABB_00955  oppD; oligopeptide transport ATP-binding protein OppD [KO:K15583]
SABB_00956  oppF; oligopeptide transport ATP-binding protein OppF [KO:K10823]
SABB_01210  peptide/nickel transport system substrate-binding periplasmic protein [KO:K15584]
SABB_01211  peptide/nickel transport system permease protein [KO:K15585]
SABB_01212  peptide/nickel transport system permease protein [KO:K15586]
SABB_01213  oligopeptide transport ATP-binding protein [KO:K15587] [EC:7.2.2.11]
SABB_01214  peptide transport system ATP-binding protein [KO:K10824] [EC:7.2.2.11]
SABB_03038  putative Fe(3+)-citrate-binding protein [KO:K23181]
SABB_01487  Fe(3+)-citrate import system permease protein yfmE [KO:K23182]
SABB_03039  Fe(3+)-citrate import system permease protein yfmD [KO:K23183]
SABB_00679  mntA; Manganese-binding lipoprotein mntA [KO:K19975]
SABB_00680  manganese/iron transport system permease protein [KO:K19976]
SABB_00681  manganese/iron transport system ATP-binding protein [KO:K19973] [EC:7.2.2.5]
SABB_01270  Zinc transport system substrate-binding protein [KO:K09815]
SABB_00475  zinc transport system permease protein [KO:K09816]
SABB_00476  zinc transport system ATP-binding protein [KO:K09817] [EC:7.2.2.20]
SABB_01389  putative biotin transporter BioY [KO:K03523]
SABB_01041  putative cobalt/nickel transport system permease protein [KO:K16785]
SABB_01445  Energy-coupling factor transporter transmembrane protein EcfT [KO:K16785]
SABB_02091  Cobalt/nickel transport system permease protein [KO:K16785]
SABB_01443  ecfA2; Energy-coupling factor transporter ATP-binding protein EcfA 2 [KO:K16786] [EC:7.-.-.-]
SABB_05410  ecfA1; Energy-coupling factor transporter ATP-binding protein EcfA 1 [KO:K16787] [EC:7.-.-.-]
SABB_00686  tagG; teichoic acid translocation permease protein tagG [KO:K09692]
SABB_02296  teichoic acid transport system permease protein [KO:K09692]
SABB_03359  tagH; Teichoic acids export ATP-binding protein TagH [KO:K09693] [EC:7.5.2.4]
SABB_02297  teichoic acid transport system ATP-binding protein [KO:K09693] [EC:7.5.2.4]
SABB_02675  hrtB; Hemin transport system permease protein hrtB [KO:K09813]
SABB_01314  hrtA; Hemin import ATP-binding protein HrtA [KO:K09814] [EC:7.6.2.-]
SABB_02108  Bacitracin export permease protein BceB [KO:K11632]
SABB_02107  Bacitracin export ATP-binding protein BceA [KO:K11631]
SABB_01940  epiE; Lantibiotic epidermin immunity protein F [KO:K20491]
SABB_01939  putative antibiotic transport system permease protein [KO:K20494]
SABB_01941  srtF; lantibiotic transport ATP-binding protein SrtF [KO:K20490]
SABB_01156  putative peptide export permease protein [KO:K16916]
SABB_01157  putative peptide export ATP-binding protein [KO:K16917]
SABB_02032  ABC transporter permease protein [KO:K19084]
SABB_03162  ABC transporter ATP-binding protein [KO:K19083]
SABB_06076  bacitracin ABC transporter permease [KO:K19080]
SABB_00708  bacitracin transport system ATP-binding protein [KO:K19079]
SABB_02671  ABC transporter ATP-binding/permease protein [KO:K14698] [EC:7.-.-.-]
SABB_01247  putative ABC transporter ATP-binding/permease protein [KO:K14699] [EC:7.-.-.-]
SABB_00691  bmrA; Multidrug resistance ABC transporter ATP-binding/permease protein BmrA [KO:K18104] [EC:7.6.2.2]
SABB_00732  ABC transporter ATP-binding protein [KO:K16012]
SABB_02890  ABC transporter ATP-binding protein [KO:K16013]
Compound
C00009  Orthophosphate
C00025  L-Glutamate
C00031  D-Glucose
C00032  Heme
C00034  Manganese
C00037  Glycine
C00038  Zinc cation
C00041  L-Alanine
C00047  L-Lysine
C00049  L-Aspartate
C00051  Glutathione
C00059  Sulfate
C00062  L-Arginine
C00064  L-Glutamine
C00065  L-Serine
C00070  Copper
C00077  L-Ornithine
C00079  L-Phenylalanine
C00086  Urea
C00088  Nitrite
C00089  Sucrose
C00093  sn-Glycerol 3-phosphate
C00095  D-Fructose
C00098  Oligopeptide
C00107  Dipeptide
C00114  Choline
C00116  Glycerol
C00120  Biotin
C00121  D-Ribose
C00123  L-Leucine
C00134  Putrescine
C00135  L-Histidine
C00137  myo-Inositol
C00140  N-Acetyl-D-glucosamine
C00148  L-Proline
C00151  L-Amino acid
C00159  D-Mannose
C00175  Cobalt ion
C00181  D-Xylose
C00183  L-Valine
C00185  Cellobiose
C00188  L-Threonine
C00208  Maltose
C00212  Adenosine
C00243  Lactose
C00244  Nitrate
C00245  Taurine
C00255  Riboflavin
C00259  L-Arabinose
C00288  HCO3-
C00291  Nickel
C00294  Inosine
C00299  Uridine
C00315  Spermidine
C00320  Thiosulfate
C00330  Deoxyguanosine
C00333  D-Galacturonate
C00338  Lipopolysaccharide
C00378  Thiamine
C00379  Xylitol
C00387  Guanosine
C00392  Mannitol
C00407  L-Isoleucine
C00430  5-Aminolevulinate
C00470  Pectate
C00475  Cytidine
C00487  Carnitine
C00491  L-Cystine
C00492  Raffinose
C00503  Erythritol
C00526  Deoxyuridine
C00559  Deoxyadenosine
C00719  Betaine
C00794  D-Sorbitol
C00855  D-Methionine
C00865  Phospholipid
C00881  Deoxycytidine
C00919  Choline sulfate
C00973  Cyclomaltodextrin
C01083  alpha,alpha-Trehalose
C01153  Orthophosphoric monoester
C01157  Hydroxyproline
C01177  Inositol 1-phosphate
C01181  4-Trimethylammoniobutanoate
C01279  4-Amino-5-hydroxymethyl-2-methylpyrimidine
C01330  Sodium cation
C01417  Cyanate
C01487  D-Allose
C01606  Phthalate
C01630  Xylobiose
C01667  Bacitracin
C01674  Chitobiose
C01682  Nopaline
C01684  D-Rhamnose
C01762  Xanthosine
C01834  Lipoprotein
C01835  Maltotriose
C01935  Maltodextrin
C01946  Oleandomycin
C02160  Isomaltotriose
C02273  Digalacturonate
C03557  2-Aminoethylphosphonate
C03611  Galactose oligosaccharide
C03619  Methyl beta-D-galactoside
C04114  (E)-4-(Trimethylammonio)but-2-enoate
C04137  Octopine
C05349  Ciprofloxacin
C05402  Melibiose
C05512  Deoxyinosine
C05776  Vitamin B12
C06227  Fe(III)hydroxamate
C06229  Fe(III)dicitrate
C06230  Fe-enterobactin
C06232  Molybdate
C06687  Norfloxacin
C06705  Capsular polysaccharide
C06706  Lipo-oligosaccharide
C06707  Teichoic acid
C06767  Hemine
C07662  Sparfloxacin
C07663  Moxifloxacin
C11612  Polymyxin B
C13768  Colistin sulfate
C14818  Fe2+
C14819  Fe3+
C15521  Alkanesulfonate
C15719  Coelichelin
C16421  AI-2
C16692  Mannopine
C19609  Nickel(2+)
C19872  N-Formyl-4-amino-5-aminomethyl-2-methylpyrimidine
C20570  alpha-1,5-L-Arabinobiose
C20571  alpha-1,5-L-Arabinotriose
C20572  alpha-1,5-L-Arabinotetraose
C20573  Aldotetraouronic acid
C20679  Tungstate
C21066  D-Galactofuranose
C22040  S-Methyl-L-cysteine
G00457  Maltotetraose
Reference
PMID:9799792
  Authors
Tomii K, Kanehisa M.
  Title
A comparative analysis of ABC transporters in complete microbial genomes.
  Journal
Genome Res 8:1048-59 (1998)
DOI:10.1101/gr.8.10.1048
Reference
  Authors
Sperandeo P, Lau FK, Carpentieri A, De Castro C, Molinaro A, Deho G, Silhavy TJ, Polissi A
  Title
Functional analysis of the protein machinery required for transport of lipopolysaccharide to the outer membrane of Escherichia coli.
  Journal
J Bacteriol 190:4460-9 (2008)
DOI:10.1128/JB.00270-08
Reference
  Authors
Ruiz N, Gronenberg LS, Kahne D, Silhavy TJ
  Title
Identification of two inner-membrane proteins required for the transport of lipopolysaccharide to the outer membrane of Escherichia coli.
  Journal
Proc Natl Acad Sci U S A 105:5537-42 (2008)
DOI:10.1073/pnas.0801196105
Reference
  Authors
Omata T, Price GD, Badger MR, Okamura M, Gohta S, Ogawa T
  Title
Identification of an ATP-binding cassette transporter involved in bicarbonate uptake in the cyanobacterium Synechococcus sp. strain PCC 7942.
  Journal
Proc Natl Acad Sci U S A 96:13571-6 (1999)
DOI:10.1073/pnas.96.23.13571
Reference
  Authors
Quintero MJ, Montesinos ML, Herrero A, Flores E
  Title
Identification of genes encoding amino acid permeases by inactivation of selected ORFs from the Synechocystis genomic sequence.
  Journal
Genome Res 11:2034-40 (2001)
DOI:10.1101/gr.196301
Reference
  Authors
Picossi S, Montesinos ML, Pernil R, Lichtle C, Herrero A, Flores E
  Title
ABC-type neutral amino acid permease N-I is required for optimal diazotrophic growth and is repressed in the heterocysts of Anabaena sp. strain PCC 7120.
  Journal
Mol Microbiol 57:1582-92 (2005)
DOI:10.1111/j.1365-2958.2005.04791.x
Reference
  Authors
Valladares A, Montesinos ML, Herrero A, Flores E.
  Title
An ABC-type, high-affinity urea permease identified in cyanobacteria.
  Journal
Mol Microbiol 43:703-15 (2002)
DOI:10.1046/j.1365-2958.2002.02778.x
Reference
  Authors
Richard-Fogal CL, Frawley ER, Kranz RG
  Title
Topology and function of CcmD in cytochrome c maturation.
  Journal
J Bacteriol 190:3489-93 (2008)
DOI:10.1128/JB.00146-08
Reference
  Authors
Suzuki H, Koyanagi T, Izuka S, Onishi A, Kumagai H
  Title
The yliA, -B, -C, and -D genes of Escherichia coli K-12 encode a novel glutathione importer with an ATP-binding cassette.
  Journal
J Bacteriol 187:5861-7 (2005)
DOI:10.1128/JB.187.17.5861-5867.2005
Reference
  Authors
Novikova M, Metlitskaya A, Datsenko K, Kazakov T, Kazakov A, Wanner B, Severinov K
  Title
The Escherichia coli Yej transporter is required for the uptake of translation inhibitor microcin C.
  Journal
J Bacteriol 189:8361-5 (2007)
DOI:10.1128/JB.01028-07
Reference
  Authors
Tikhonova EB, Devroy VK, Lau SY, Zgurskaya HI
  Title
Reconstitution of the Escherichia coli macrolide transporter: the periplasmic membrane fusion protein MacA stimulates the ATPase activity of MacB.
  Journal
Mol Microbiol 63:895-910 (2007)
DOI:10.1111/j.1365-2958.2006.05549.x
Reference
  Authors
Yamanaka H, Kobayashi H, Takahashi E, Okamoto K
  Title
MacAB is involved in the secretion of Escherichia coli heat-stable enterotoxin II.
  Journal
J Bacteriol 190:7693-8 (2008)
DOI:10.1128/JB.00853-08
KO pathway
ko02010   
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