KEGG   PATHWAY: sdeo01100
Entry
sdeo01100                   Pathway                                
Name
Metabolic pathways - Shewanella decolorationis
Class
Pathway map
sdeo01100  Metabolic pathways
sdeo01100

Module
sdeo_M00002  Glycolysis, core module involving three-carbon compounds [PATH:sdeo01100]
sdeo_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:sdeo01100]
sdeo_M00004  Pentose phosphate pathway (Pentose phosphate cycle) [PATH:sdeo01100]
sdeo_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:sdeo01100]
sdeo_M00006  Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:sdeo01100]
sdeo_M00007  Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:sdeo01100]
sdeo_M00008  Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:sdeo01100]
sdeo_M00009  Citrate cycle (TCA cycle, Krebs cycle) [PATH:sdeo01100]
sdeo_M00010  Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:sdeo01100]
sdeo_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:sdeo01100]
sdeo_M00012  Glyoxylate cycle [PATH:sdeo01100]
sdeo_M00015  Proline biosynthesis, glutamate => proline [PATH:sdeo01100]
sdeo_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:sdeo01100]
sdeo_M00017  Methionine biosynthesis, aspartate => homoserine => methionine [PATH:sdeo01100]
sdeo_M00018  Threonine biosynthesis, aspartate => homoserine => threonine [PATH:sdeo01100]
sdeo_M00019  Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:sdeo01100]
sdeo_M00020  Serine biosynthesis, glycerate-3P => serine [PATH:sdeo01100]
sdeo_M00021  Cysteine biosynthesis, serine => cysteine [PATH:sdeo01100]
sdeo_M00022  Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:sdeo01100]
sdeo_M00023  Tryptophan biosynthesis, chorismate => tryptophan [PATH:sdeo01100]
sdeo_M00024  Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine [PATH:sdeo01100]
sdeo_M00025  Tyrosine biosynthesis, chorismate => HPP => tyrosine [PATH:sdeo01100]
sdeo_M00026  Histidine biosynthesis, PRPP => histidine [PATH:sdeo01100]
sdeo_M00036  Leucine degradation, leucine => acetoacetate + acetyl-CoA [PATH:sdeo01100]
sdeo_M00044  Tyrosine degradation, tyrosine => homogentisate [PATH:sdeo01100]
sdeo_M00045  Histidine degradation, histidine => N-formiminoglutamate => glutamate [PATH:sdeo01100]
sdeo_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:sdeo01100]
sdeo_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:sdeo01100]
sdeo_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:sdeo01100]
sdeo_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:sdeo01100]
sdeo_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:sdeo01100]
sdeo_M00060  KDO2-lipid A biosynthesis, Raetz pathway, LpxL-LpxM type [PATH:sdeo01100]
sdeo_M00063  CMP-KDO biosynthesis [PATH:sdeo01100]
sdeo_M00083  Fatty acid biosynthesis, elongation [PATH:sdeo01100]
sdeo_M00086  beta-Oxidation, acyl-CoA synthesis [PATH:sdeo01100]
sdeo_M00087  beta-Oxidation [PATH:sdeo01100]
sdeo_M00093  Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:sdeo01100]
sdeo_M00115  NAD biosynthesis, aspartate => quinolinate => NAD [PATH:sdeo01100]
sdeo_M00116  Menaquinone biosynthesis, chorismate (+ polyprenyl-PP) => menaquinol [PATH:sdeo01100]
sdeo_M00117  Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH:sdeo01100]
sdeo_M00118  Glutathione biosynthesis, glutamate => glutathione [PATH:sdeo01100]
sdeo_M00120  Coenzyme A biosynthesis, pantothenate => CoA [PATH:sdeo01100]
sdeo_M00121  Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:sdeo01100]
sdeo_M00122  Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH:sdeo01100]
sdeo_M00123  Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:sdeo01100]
sdeo_M00124  Pyridoxal-P biosynthesis, erythrose-4P => pyridoxal-P [PATH:sdeo01100]
sdeo_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:sdeo01100]
sdeo_M00126  Tetrahydrofolate biosynthesis, GTP => THF [PATH:sdeo01100]
sdeo_M00127  Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP [PATH:sdeo01100]
sdeo_M00140  C1-unit interconversion, prokaryotes [PATH:sdeo01100]
sdeo_M00149  Succinate dehydrogenase, prokaryotes [PATH:sdeo01100]
sdeo_M00151  Cytochrome bc1 complex respiratory unit [PATH:sdeo01100]
sdeo_M00155  Cytochrome c oxidase, prokaryotes [PATH:sdeo01100]
sdeo_M00156  Cytochrome c oxidase, cbb3-type [PATH:sdeo01100]
sdeo_M00157  F-type ATPase, prokaryotes and chloroplasts [PATH:sdeo01100]
sdeo_M00168  CAM (Crassulacean acid metabolism), dark [PATH:sdeo01100]
sdeo_M00176  Assimilatory sulfate reduction, sulfate => H2S [PATH:sdeo01100]
sdeo_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:sdeo01100]
sdeo_M00417  Cytochrome o ubiquinol oxidase [PATH:sdeo01100]
sdeo_M00432  Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:sdeo01100]
sdeo_M00570  Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:sdeo01100]
sdeo_M00579  Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate [PATH:sdeo01100]
sdeo_M00621  Glycine cleavage system [PATH:sdeo01100]
sdeo_M00793  dTDP-L-rhamnose biosynthesis [PATH:sdeo01100]
sdeo_M00844  Arginine biosynthesis, ornithine => arginine [PATH:sdeo01100]
sdeo_M00854  Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:sdeo01100]
sdeo_M00880  Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:sdeo01100]
sdeo_M00881  Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:sdeo01100]
sdeo_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:sdeo01100]
sdeo_M00970  Proline degradation, proline => glutamate [PATH:sdeo01100]
Organism
Shewanella decolorationis [GN:sdeo]
Related
pathway
sdeo00010  Glycolysis / Gluconeogenesis
sdeo00020  Citrate cycle (TCA cycle)
sdeo00030  Pentose phosphate pathway
sdeo00040  Pentose and glucuronate interconversions
sdeo00051  Fructose and mannose metabolism
sdeo00052  Galactose metabolism
sdeo00053  Ascorbate and aldarate metabolism
sdeo00061  Fatty acid biosynthesis
sdeo00071  Fatty acid degradation
sdeo00130  Ubiquinone and other terpenoid-quinone biosynthesis
sdeo00190  Oxidative phosphorylation
sdeo00220  Arginine biosynthesis
sdeo00230  Purine metabolism
sdeo00240  Pyrimidine metabolism
sdeo00250  Alanine, aspartate and glutamate metabolism
sdeo00260  Glycine, serine and threonine metabolism
sdeo00261  Monobactam biosynthesis
sdeo00270  Cysteine and methionine metabolism
sdeo00280  Valine, leucine and isoleucine degradation
sdeo00290  Valine, leucine and isoleucine biosynthesis
sdeo00300  Lysine biosynthesis
sdeo00310  Lysine degradation
sdeo00330  Arginine and proline metabolism
sdeo00332  Carbapenem biosynthesis
sdeo00340  Histidine metabolism
sdeo00350  Tyrosine metabolism
sdeo00360  Phenylalanine metabolism
sdeo00361  Chlorocyclohexane and chlorobenzene degradation
sdeo00362  Benzoate degradation
sdeo00364  Fluorobenzoate degradation
sdeo00380  Tryptophan metabolism
sdeo00400  Phenylalanine, tyrosine and tryptophan biosynthesis
sdeo00401  Novobiocin biosynthesis
sdeo00410  beta-Alanine metabolism
sdeo00430  Taurine and hypotaurine metabolism
sdeo00450  Selenocompound metabolism
sdeo00460  Cyanoamino acid metabolism
sdeo00470  D-Amino acid metabolism
sdeo00480  Glutathione metabolism
sdeo00500  Starch and sucrose metabolism
sdeo00511  Other glycan degradation
sdeo00520  Amino sugar and nucleotide sugar metabolism
sdeo00521  Streptomycin biosynthesis
sdeo00523  Polyketide sugar unit biosynthesis
sdeo00525  Acarbose and validamycin biosynthesis
sdeo00540  Lipopolysaccharide biosynthesis
sdeo00541  O-Antigen nucleotide sugar biosynthesis
sdeo00543  Exopolysaccharide biosynthesis
sdeo00550  Peptidoglycan biosynthesis
sdeo00552  Teichoic acid biosynthesis
sdeo00561  Glycerolipid metabolism
sdeo00562  Inositol phosphate metabolism
sdeo00564  Glycerophospholipid metabolism
sdeo00565  Ether lipid metabolism
sdeo00590  Arachidonic acid metabolism
sdeo00592  alpha-Linolenic acid metabolism
sdeo00600  Sphingolipid metabolism
sdeo00620  Pyruvate metabolism
sdeo00623  Toluene degradation
sdeo00625  Chloroalkane and chloroalkene degradation
sdeo00626  Naphthalene degradation
sdeo00627  Aminobenzoate degradation
sdeo00630  Glyoxylate and dicarboxylate metabolism
sdeo00633  Nitrotoluene degradation
sdeo00640  Propanoate metabolism
sdeo00643  Styrene degradation
sdeo00650  Butanoate metabolism
sdeo00660  C5-Branched dibasic acid metabolism
sdeo00670  One carbon pool by folate
sdeo00680  Methane metabolism
sdeo00710  Carbon fixation by Calvin cycle
sdeo00720  Other carbon fixation pathways
sdeo00730  Thiamine metabolism
sdeo00740  Riboflavin metabolism
sdeo00750  Vitamin B6 metabolism
sdeo00760  Nicotinate and nicotinamide metabolism
sdeo00770  Pantothenate and CoA biosynthesis
sdeo00780  Biotin metabolism
sdeo00785  Lipoic acid metabolism
sdeo00790  Folate biosynthesis
sdeo00860  Porphyrin metabolism
sdeo00900  Terpenoid backbone biosynthesis
sdeo00903  Limonene degradation
sdeo00907  Pinene, camphor and geraniol degradation
sdeo00910  Nitrogen metabolism
sdeo00920  Sulfur metabolism
sdeo00930  Caprolactam degradation
sdeo00999  Biosynthesis of various plant secondary metabolites
sdeo01040  Biosynthesis of unsaturated fatty acids
KO pathway
ko01100   
LinkDB

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