KEGG   PATHWAY: sdeo00010
Entry
sdeo00010                   Pathway                                
Name
Glycolysis / Gluconeogenesis - Shewanella decolorationis
Description
Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which sometimes contains operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].
Class
Metabolism; Carbohydrate metabolism
Pathway map
sdeo00010  Glycolysis / Gluconeogenesis
sdeo00010

Module
sdeo_M00002  Glycolysis, core module involving three-carbon compounds [PATH:sdeo00010]
sdeo_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:sdeo00010]
sdeo_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:sdeo00010]
Other DBs
GO: 0006096 0006094
Organism
Shewanella decolorationis [GN:sdeo]
Gene
D0436_17100  pgi; glucose-6-phosphate isomerase [KO:K01810] [EC:5.3.1.9]
D0436_18945  class 1 fructose-bisphosphatase [KO:K03841] [EC:3.1.3.11]
D0436_18170  fba; fructose-bisphosphate aldolase class II [KO:K01624] [EC:4.1.2.13]
D0436_06640  tpiA; triose-phosphate isomerase [KO:K01803] [EC:5.3.1.1]
D0436_10095  glyceraldehyde-3-phosphate dehydrogenase [KO:K00134] [EC:1.2.1.12]
D0436_10085  gap; type I glyceraldehyde-3-phosphate dehydrogenase [KO:K00134] [EC:1.2.1.12]
D0436_18175  phosphoglycerate kinase [KO:K00927] [EC:2.7.2.3]
D0436_00360  gpmM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [KO:K15633] [EC:5.4.2.12]
D0436_16650  eno; phosphopyruvate hydratase [KO:K01689] [EC:4.2.1.11]
D0436_09745  pyk; pyruvate kinase [KO:K00873] [EC:2.7.1.40]
D0436_11720  ppsA; phosphoenolpyruvate synthase [KO:K01007] [EC:2.7.9.2]
D0436_02985  aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type [KO:K00163] [EC:1.2.4.1]
D0436_02990  aceF; pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase [KO:K00627] [EC:2.3.1.12]
D0436_02995  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
D0436_12160  S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase [KO:K00121] [EC:1.1.1.284 1.1.1.1]
D0436_12330  adhE; bifunctional acetaldehyde-CoA/alcohol dehydrogenase [KO:K04072] [EC:1.2.1.10 1.1.1.1]
D0436_15550  yiaY; L-threonine dehydrogenase [KO:K13954] [EC:1.1.1.1]
D0436_02265  aldehyde dehydrogenase [KO:K00138] [EC:1.2.1.-]
D0436_13465  acs; acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
D0436_19230  galactose mutarotase [KO:K01785] [EC:5.1.3.3]
D0436_10660  pgm; phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) [KO:K01835] [EC:5.4.2.2]
D0436_13620  D-hexose-6-phosphate mutarotase [KO:K01792] [EC:5.1.3.15]
D0436_01040  phosphoenolpyruvate carboxykinase [KO:K01610] [EC:4.1.1.49]
D0436_11830  crr; PTS glucose transporter subunit IIA [KO:K02777] [EC:2.7.1.-]
D0436_15020  PTS transporter subunit EIIC [KO:K02779] [EC:2.7.1.199]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00031  D-Glucose
C00033  Acetate
C00036  Oxaloacetate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00084  Acetaldehyde
C00085  D-Fructose 6-phosphate
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00186  (S)-Lactate
C00197  3-Phospho-D-glycerate
C00221  beta-D-Glucose
C00236  3-Phospho-D-glyceroyl phosphate
C00267  alpha-D-Glucose
C00354  D-Fructose 1,6-bisphosphate
C00469  Ethanol
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C01159  2,3-Bisphospho-D-glycerate
C01172  beta-D-Glucose 6-phosphate
C01451  Salicin
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C06186  Arbutin
C06187  Arbutin 6-phosphate
C06188  Salicin 6-phosphate
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
sdeo00020  Citrate cycle (TCA cycle)
sdeo00030  Pentose phosphate pathway
sdeo00500  Starch and sucrose metabolism
sdeo00620  Pyruvate metabolism
sdeo00640  Propanoate metabolism
sdeo00710  Carbon fixation by Calvin cycle
KO pathway
ko00010   
LinkDB

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