KEGG   PATHWAY: setc01100
Entry
setc01100                   Pathway                                
Name
Metabolic pathways - Salmonella enterica subsp. enterica serovar Typhimurium var. 5- CFSAN001921
Class
Pathway map
setc01100  Metabolic pathways
setc01100

Module
setc_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:setc01100]
setc_M00002  Glycolysis, core module involving three-carbon compounds [PATH:setc01100]
setc_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:setc01100]
setc_M00004  Pentose phosphate pathway (Pentose phosphate cycle) [PATH:setc01100]
setc_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:setc01100]
setc_M00006  Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:setc01100]
setc_M00007  Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:setc01100]
setc_M00008  Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:setc01100]
setc_M00009  Citrate cycle (TCA cycle, Krebs cycle) [PATH:setc01100]
setc_M00010  Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:setc01100]
setc_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:setc01100]
setc_M00012  Glyoxylate cycle [PATH:setc01100]
setc_M00015  Proline biosynthesis, glutamate => proline [PATH:setc01100]
setc_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:setc01100]
setc_M00017  Methionine biosynthesis, aspartate => homoserine => methionine [PATH:setc01100]
setc_M00018  Threonine biosynthesis, aspartate => homoserine => threonine [PATH:setc01100]
setc_M00019  Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:setc01100]
setc_M00020  Serine biosynthesis, glycerate-3P => serine [PATH:setc01100]
setc_M00021  Cysteine biosynthesis, serine => cysteine [PATH:setc01100]
setc_M00022  Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:setc01100]
setc_M00023  Tryptophan biosynthesis, chorismate => tryptophan [PATH:setc01100]
setc_M00024  Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine [PATH:setc01100]
setc_M00025  Tyrosine biosynthesis, chorismate => HPP => tyrosine [PATH:setc01100]
setc_M00026  Histidine biosynthesis, PRPP => histidine [PATH:setc01100]
setc_M00028  Ornithine biosynthesis, glutamate => ornithine [PATH:setc01100]
setc_M00045  Histidine degradation, histidine => N-formiminoglutamate => glutamate [PATH:setc01100]
setc_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:setc01100]
setc_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:setc01100]
setc_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:setc01100]
setc_M00051  De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP [PATH:setc01100]
setc_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:setc01100]
setc_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:setc01100]
setc_M00060  KDO2-lipid A biosynthesis, Raetz pathway, LpxL-LpxM type [PATH:setc01100]
setc_M00061  D-Glucuronate degradation, D-glucuronate => pyruvate + D-glyceraldehyde 3P [PATH:setc01100]
setc_M00063  CMP-KDO biosynthesis [PATH:setc01100]
setc_M00064  ADP-L-glycero-D-manno-heptose biosynthesis [PATH:setc01100]
setc_M00082  Fatty acid biosynthesis, initiation [PATH:setc01100]
setc_M00083  Fatty acid biosynthesis, elongation [PATH:setc01100]
setc_M00086  beta-Oxidation, acyl-CoA synthesis [PATH:setc01100]
setc_M00087  beta-Oxidation [PATH:setc01100]
setc_M00093  Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:setc01100]
setc_M00096  C5 isoprenoid biosynthesis, non-mevalonate pathway [PATH:setc01100]
setc_M00115  NAD biosynthesis, aspartate => quinolinate => NAD [PATH:setc01100]
setc_M00116  Menaquinone biosynthesis, chorismate (+ polyprenyl-PP) => menaquinol [PATH:setc01100]
setc_M00117  Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH:setc01100]
setc_M00118  Glutathione biosynthesis, glutamate => glutathione [PATH:setc01100]
setc_M00119  Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH:setc01100]
setc_M00120  Coenzyme A biosynthesis, pantothenate => CoA [PATH:setc01100]
setc_M00121  Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:setc01100]
setc_M00122  Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH:setc01100]
setc_M00123  Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:setc01100]
setc_M00124  Pyridoxal-P biosynthesis, erythrose-4P => pyridoxal-P [PATH:setc01100]
setc_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:setc01100]
setc_M00126  Tetrahydrofolate biosynthesis, GTP => THF [PATH:setc01100]
setc_M00127  Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP [PATH:setc01100]
setc_M00133  Polyamine biosynthesis, arginine => agmatine => putrescine => spermidine [PATH:setc01100]
setc_M00144  NADH:quinone oxidoreductase, prokaryotes [PATH:setc01100]
setc_M00149  Succinate dehydrogenase, prokaryotes [PATH:setc01100]
setc_M00150  Fumarate reductase, prokaryotes [PATH:setc01100]
setc_M00157  F-type ATPase, prokaryotes and chloroplasts [PATH:setc01100]
setc_M00168  CAM (Crassulacean acid metabolism), dark [PATH:setc01100]
setc_M00176  Assimilatory sulfate reduction, sulfate => H2S [PATH:setc01100]
setc_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:setc01100]
setc_M00345  Formaldehyde assimilation, ribulose monophosphate pathway [PATH:setc01100]
setc_M00364  C10-C20 isoprenoid biosynthesis, bacteria [PATH:setc01100]
setc_M00417  Cytochrome o ubiquinol oxidase [PATH:setc01100]
setc_M00432  Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:setc01100]
setc_M00530  Dissimilatory nitrate reduction, nitrate => ammonia [PATH:setc01100]
setc_M00533  Homoprotocatechuate degradation, homoprotocatechuate => 2-oxohept-3-enedioate [PATH:setc01100]
setc_M00549  Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:setc01100]
setc_M00550  Ascorbate degradation, ascorbate => D-xylulose-5P [PATH:setc01100]
setc_M00552  D-galactonate degradation, De Ley-Doudoroff pathway, D-galactonate => glycerate-3P [PATH:setc01100]
setc_M00554  Nucleotide sugar biosynthesis, galactose => UDP-galactose [PATH:setc01100]
setc_M00565  Trehalose biosynthesis, D-glucose 1P => trehalose [PATH:setc01100]
setc_M00570  Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:setc01100]
setc_M00572  Pimeloyl-ACP biosynthesis, BioC-BioH pathway, malonyl-ACP => pimeloyl-ACP [PATH:setc01100]
setc_M00579  Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate [PATH:setc01100]
setc_M00580  Pentose phosphate pathway, archaea, fructose 6P => ribose 5P [PATH:setc01100]
setc_M00621  Glycine cleavage system [PATH:setc01100]
setc_M00632  Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P [PATH:setc01100]
setc_M00761  Undecaprenylphosphate alpha-L-Ara4N biosynthesis, UDP-GlcA => undecaprenyl phosphate alpha-L-Ara4N [PATH:setc01100]
setc_M00793  dTDP-L-rhamnose biosynthesis [PATH:setc01100]
setc_M00844  Arginine biosynthesis, ornithine => arginine [PATH:setc01100]
setc_M00846  Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH:setc01100]
setc_M00854  Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:setc01100]
setc_M00855  Glycogen degradation, glycogen => glucose-6P [PATH:setc01100]
setc_M00879  Arginine succinyltransferase pathway, arginine => glutamate [PATH:setc01100]
setc_M00880  Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:setc01100]
setc_M00881  Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:setc01100]
setc_M00899  Thiamine salvage pathway, HMP/HET => TMP [PATH:setc01100]
setc_M00909  UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:setc01100]
setc_M00924  Cobalamin biosynthesis, anaerobic, uroporphyrinogen III => sirohydrochlorin => cobyrinate a,c-diamide [PATH:setc01100]
setc_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:setc01100]
setc_M00956  Lysine degradation, bacteria, L-lysine => succinate [PATH:setc01100]
setc_M00970  Proline degradation, proline => glutamate [PATH:setc01100]
Organism
Salmonella enterica subsp. enterica serovar Typhimurium var. 5- CFSAN001921 [GN:setc]
Related
pathway
setc00010  Glycolysis / Gluconeogenesis
setc00020  Citrate cycle (TCA cycle)
setc00030  Pentose phosphate pathway
setc00040  Pentose and glucuronate interconversions
setc00051  Fructose and mannose metabolism
setc00052  Galactose metabolism
setc00053  Ascorbate and aldarate metabolism
setc00061  Fatty acid biosynthesis
setc00071  Fatty acid degradation
setc00074  Mycolic acid biosynthesis
setc00130  Ubiquinone and other terpenoid-quinone biosynthesis
setc00190  Oxidative phosphorylation
setc00220  Arginine biosynthesis
setc00230  Purine metabolism
setc00240  Pyrimidine metabolism
setc00250  Alanine, aspartate and glutamate metabolism
setc00260  Glycine, serine and threonine metabolism
setc00261  Monobactam biosynthesis
setc00270  Cysteine and methionine metabolism
setc00280  Valine, leucine and isoleucine degradation
setc00290  Valine, leucine and isoleucine biosynthesis
setc00300  Lysine biosynthesis
setc00310  Lysine degradation
setc00330  Arginine and proline metabolism
setc00332  Carbapenem biosynthesis
setc00340  Histidine metabolism
setc00350  Tyrosine metabolism
setc00360  Phenylalanine metabolism
setc00361  Chlorocyclohexane and chlorobenzene degradation
setc00362  Benzoate degradation
setc00364  Fluorobenzoate degradation
setc00380  Tryptophan metabolism
setc00400  Phenylalanine, tyrosine and tryptophan biosynthesis
setc00401  Novobiocin biosynthesis
setc00410  beta-Alanine metabolism
setc00430  Taurine and hypotaurine metabolism
setc00440  Phosphonate and phosphinate metabolism
setc00450  Selenocompound metabolism
setc00460  Cyanoamino acid metabolism
setc00470  D-Amino acid metabolism
setc00480  Glutathione metabolism
setc00500  Starch and sucrose metabolism
setc00520  Amino sugar and nucleotide sugar metabolism
setc00521  Streptomycin biosynthesis
setc00523  Polyketide sugar unit biosynthesis
setc00525  Acarbose and validamycin biosynthesis
setc00540  Lipopolysaccharide biosynthesis
setc00541  O-Antigen nucleotide sugar biosynthesis
setc00542  O-Antigen repeat unit biosynthesis
setc00543  Exopolysaccharide biosynthesis
setc00550  Peptidoglycan biosynthesis
setc00552  Teichoic acid biosynthesis
setc00561  Glycerolipid metabolism
setc00562  Inositol phosphate metabolism
setc00564  Glycerophospholipid metabolism
setc00565  Ether lipid metabolism
setc00592  alpha-Linolenic acid metabolism
setc00600  Sphingolipid metabolism
setc00620  Pyruvate metabolism
setc00623  Toluene degradation
setc00625  Chloroalkane and chloroalkene degradation
setc00626  Naphthalene degradation
setc00627  Aminobenzoate degradation
setc00630  Glyoxylate and dicarboxylate metabolism
setc00633  Nitrotoluene degradation
setc00640  Propanoate metabolism
setc00643  Styrene degradation
setc00650  Butanoate metabolism
setc00660  C5-Branched dibasic acid metabolism
setc00670  One carbon pool by folate
setc00680  Methane metabolism
setc00710  Carbon fixation by Calvin cycle
setc00720  Other carbon fixation pathways
setc00730  Thiamine metabolism
setc00740  Riboflavin metabolism
setc00750  Vitamin B6 metabolism
setc00760  Nicotinate and nicotinamide metabolism
setc00770  Pantothenate and CoA biosynthesis
setc00780  Biotin metabolism
setc00785  Lipoic acid metabolism
setc00790  Folate biosynthesis
setc00860  Porphyrin metabolism
setc00900  Terpenoid backbone biosynthesis
setc00907  Pinene, camphor and geraniol degradation
setc00910  Nitrogen metabolism
setc00920  Sulfur metabolism
setc00930  Caprolactam degradation
setc00946  Degradation of flavonoids
setc00999  Biosynthesis of various plant secondary metabolites
setc01040  Biosynthesis of unsaturated fatty acids
setc01053  Biosynthesis of siderophore group nonribosomal peptides
KO pathway
ko01100   
LinkDB

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