KEGG   PATHWAY: sey01100
Entry
sey01100                    Pathway                                
Name
Metabolic pathways - Salmonella enterica subsp. enterica serovar Typhimurium SL1344
Class
Pathway map
sey01100  Metabolic pathways
sey01100

Module
sey_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:sey01100]
sey_M00002  Glycolysis, core module involving three-carbon compounds [PATH:sey01100]
sey_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:sey01100]
sey_M00004  Pentose phosphate pathway (Pentose phosphate cycle) [PATH:sey01100]
sey_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:sey01100]
sey_M00006  Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:sey01100]
sey_M00007  Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:sey01100]
sey_M00008  Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:sey01100]
sey_M00009  Citrate cycle (TCA cycle, Krebs cycle) [PATH:sey01100]
sey_M00010  Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:sey01100]
sey_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:sey01100]
sey_M00012  Glyoxylate cycle [PATH:sey01100]
sey_M00015  Proline biosynthesis, glutamate => proline [PATH:sey01100]
sey_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:sey01100]
sey_M00017  Methionine biosynthesis, aspartate => homoserine => methionine [PATH:sey01100]
sey_M00018  Threonine biosynthesis, aspartate => homoserine => threonine [PATH:sey01100]
sey_M00019  Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:sey01100]
sey_M00020  Serine biosynthesis, glycerate-3P => serine [PATH:sey01100]
sey_M00021  Cysteine biosynthesis, serine => cysteine [PATH:sey01100]
sey_M00022  Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:sey01100]
sey_M00023  Tryptophan biosynthesis, chorismate => tryptophan [PATH:sey01100]
sey_M00024  Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine [PATH:sey01100]
sey_M00025  Tyrosine biosynthesis, chorismate => HPP => tyrosine [PATH:sey01100]
sey_M00026  Histidine biosynthesis, PRPP => histidine [PATH:sey01100]
sey_M00028  Ornithine biosynthesis, glutamate => ornithine [PATH:sey01100]
sey_M00045  Histidine degradation, histidine => N-formiminoglutamate => glutamate [PATH:sey01100]
sey_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:sey01100]
sey_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:sey01100]
sey_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:sey01100]
sey_M00051  De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP [PATH:sey01100]
sey_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:sey01100]
sey_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:sey01100]
sey_M00060  KDO2-lipid A biosynthesis, Raetz pathway, LpxL-LpxM type [PATH:sey01100]
sey_M00061  D-Glucuronate degradation, D-glucuronate => pyruvate + D-glyceraldehyde 3P [PATH:sey01100]
sey_M00063  CMP-KDO biosynthesis [PATH:sey01100]
sey_M00064  ADP-L-glycero-D-manno-heptose biosynthesis [PATH:sey01100]
sey_M00082  Fatty acid biosynthesis, initiation [PATH:sey01100]
sey_M00083  Fatty acid biosynthesis, elongation [PATH:sey01100]
sey_M00086  beta-Oxidation, acyl-CoA synthesis [PATH:sey01100]
sey_M00087  beta-Oxidation [PATH:sey01100]
sey_M00093  Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:sey01100]
sey_M00096  C5 isoprenoid biosynthesis, non-mevalonate pathway [PATH:sey01100]
sey_M00115  NAD biosynthesis, aspartate => quinolinate => NAD [PATH:sey01100]
sey_M00116  Menaquinone biosynthesis, chorismate (+ polyprenyl-PP) => menaquinol [PATH:sey01100]
sey_M00117  Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH:sey01100]
sey_M00118  Glutathione biosynthesis, glutamate => glutathione [PATH:sey01100]
sey_M00119  Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH:sey01100]
sey_M00120  Coenzyme A biosynthesis, pantothenate => CoA [PATH:sey01100]
sey_M00121  Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:sey01100]
sey_M00122  Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH:sey01100]
sey_M00123  Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:sey01100]
sey_M00124  Pyridoxal-P biosynthesis, erythrose-4P => pyridoxal-P [PATH:sey01100]
sey_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:sey01100]
sey_M00126  Tetrahydrofolate biosynthesis, GTP => THF [PATH:sey01100]
sey_M00127  Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP [PATH:sey01100]
sey_M00133  Polyamine biosynthesis, arginine => agmatine => putrescine => spermidine [PATH:sey01100]
sey_M00144  NADH:quinone oxidoreductase, prokaryotes [PATH:sey01100]
sey_M00149  Succinate dehydrogenase, prokaryotes [PATH:sey01100]
sey_M00150  Fumarate reductase, prokaryotes [PATH:sey01100]
sey_M00157  F-type ATPase, prokaryotes and chloroplasts [PATH:sey01100]
sey_M00168  CAM (Crassulacean acid metabolism), dark [PATH:sey01100]
sey_M00176  Assimilatory sulfate reduction, sulfate => H2S [PATH:sey01100]
sey_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:sey01100]
sey_M00345  Formaldehyde assimilation, ribulose monophosphate pathway [PATH:sey01100]
sey_M00364  C10-C20 isoprenoid biosynthesis, bacteria [PATH:sey01100]
sey_M00417  Cytochrome o ubiquinol oxidase [PATH:sey01100]
sey_M00432  Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:sey01100]
sey_M00530  Dissimilatory nitrate reduction, nitrate => ammonia [PATH:sey01100]
sey_M00533  Homoprotocatechuate degradation, homoprotocatechuate => 2-oxohept-3-enedioate [PATH:sey01100]
sey_M00549  Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:sey01100]
sey_M00550  Ascorbate degradation, ascorbate => D-xylulose-5P [PATH:sey01100]
sey_M00552  D-galactonate degradation, De Ley-Doudoroff pathway, D-galactonate => glycerate-3P [PATH:sey01100]
sey_M00554  Nucleotide sugar biosynthesis, galactose => UDP-galactose [PATH:sey01100]
sey_M00565  Trehalose biosynthesis, D-glucose 1P => trehalose [PATH:sey01100]
sey_M00570  Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:sey01100]
sey_M00572  Pimeloyl-ACP biosynthesis, BioC-BioH pathway, malonyl-ACP => pimeloyl-ACP [PATH:sey01100]
sey_M00579  Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate [PATH:sey01100]
sey_M00580  Pentose phosphate pathway, archaea, fructose 6P => ribose 5P [PATH:sey01100]
sey_M00621  Glycine cleavage system [PATH:sey01100]
sey_M00632  Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P [PATH:sey01100]
sey_M00761  Undecaprenylphosphate alpha-L-Ara4N biosynthesis, UDP-GlcA => undecaprenyl phosphate alpha-L-Ara4N [PATH:sey01100]
sey_M00793  dTDP-L-rhamnose biosynthesis [PATH:sey01100]
sey_M00844  Arginine biosynthesis, ornithine => arginine [PATH:sey01100]
sey_M00846  Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH:sey01100]
sey_M00854  Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:sey01100]
sey_M00855  Glycogen degradation, glycogen => glucose-6P [PATH:sey01100]
sey_M00879  Arginine succinyltransferase pathway, arginine => glutamate [PATH:sey01100]
sey_M00880  Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:sey01100]
sey_M00881  Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:sey01100]
sey_M00899  Thiamine salvage pathway, HMP/HET => TMP [PATH:sey01100]
sey_M00909  UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:sey01100]
sey_M00924  Cobalamin biosynthesis, anaerobic, uroporphyrinogen III => sirohydrochlorin => cobyrinate a,c-diamide [PATH:sey01100]
sey_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:sey01100]
sey_M00956  Lysine degradation, bacteria, L-lysine => succinate [PATH:sey01100]
sey_M00970  Proline degradation, proline => glutamate [PATH:sey01100]
Organism
Salmonella enterica subsp. enterica serovar Typhimurium SL1344 [GN:sey]
Related
pathway
sey00010  Glycolysis / Gluconeogenesis
sey00020  Citrate cycle (TCA cycle)
sey00030  Pentose phosphate pathway
sey00040  Pentose and glucuronate interconversions
sey00051  Fructose and mannose metabolism
sey00052  Galactose metabolism
sey00053  Ascorbate and aldarate metabolism
sey00061  Fatty acid biosynthesis
sey00071  Fatty acid degradation
sey00130  Ubiquinone and other terpenoid-quinone biosynthesis
sey00190  Oxidative phosphorylation
sey00220  Arginine biosynthesis
sey00230  Purine metabolism
sey00240  Pyrimidine metabolism
sey00250  Alanine, aspartate and glutamate metabolism
sey00260  Glycine, serine and threonine metabolism
sey00261  Monobactam biosynthesis
sey00270  Cysteine and methionine metabolism
sey00280  Valine, leucine and isoleucine degradation
sey00290  Valine, leucine and isoleucine biosynthesis
sey00300  Lysine biosynthesis
sey00310  Lysine degradation
sey00330  Arginine and proline metabolism
sey00332  Carbapenem biosynthesis
sey00340  Histidine metabolism
sey00350  Tyrosine metabolism
sey00360  Phenylalanine metabolism
sey00361  Chlorocyclohexane and chlorobenzene degradation
sey00362  Benzoate degradation
sey00364  Fluorobenzoate degradation
sey00380  Tryptophan metabolism
sey00400  Phenylalanine, tyrosine and tryptophan biosynthesis
sey00401  Novobiocin biosynthesis
sey00410  beta-Alanine metabolism
sey00430  Taurine and hypotaurine metabolism
sey00440  Phosphonate and phosphinate metabolism
sey00450  Selenocompound metabolism
sey00460  Cyanoamino acid metabolism
sey00470  D-Amino acid metabolism
sey00480  Glutathione metabolism
sey00500  Starch and sucrose metabolism
sey00520  Amino sugar and nucleotide sugar metabolism
sey00521  Streptomycin biosynthesis
sey00523  Polyketide sugar unit biosynthesis
sey00525  Acarbose and validamycin biosynthesis
sey00540  Lipopolysaccharide biosynthesis
sey00541  O-Antigen nucleotide sugar biosynthesis
sey00542  O-Antigen repeat unit biosynthesis
sey00543  Exopolysaccharide biosynthesis
sey00550  Peptidoglycan biosynthesis
sey00552  Teichoic acid biosynthesis
sey00561  Glycerolipid metabolism
sey00562  Inositol phosphate metabolism
sey00564  Glycerophospholipid metabolism
sey00565  Ether lipid metabolism
sey00592  alpha-Linolenic acid metabolism
sey00600  Sphingolipid metabolism
sey00620  Pyruvate metabolism
sey00623  Toluene degradation
sey00625  Chloroalkane and chloroalkene degradation
sey00626  Naphthalene degradation
sey00627  Aminobenzoate degradation
sey00630  Glyoxylate and dicarboxylate metabolism
sey00633  Nitrotoluene degradation
sey00640  Propanoate metabolism
sey00643  Styrene degradation
sey00650  Butanoate metabolism
sey00660  C5-Branched dibasic acid metabolism
sey00670  One carbon pool by folate
sey00680  Methane metabolism
sey00710  Carbon fixation by Calvin cycle
sey00720  Other carbon fixation pathways
sey00730  Thiamine metabolism
sey00740  Riboflavin metabolism
sey00750  Vitamin B6 metabolism
sey00760  Nicotinate and nicotinamide metabolism
sey00770  Pantothenate and CoA biosynthesis
sey00780  Biotin metabolism
sey00785  Lipoic acid metabolism
sey00790  Folate biosynthesis
sey00860  Porphyrin metabolism
sey00900  Terpenoid backbone biosynthesis
sey00907  Pinene, camphor and geraniol degradation
sey00910  Nitrogen metabolism
sey00920  Sulfur metabolism
sey00930  Caprolactam degradation
sey00946  Degradation of flavonoids
sey00999  Biosynthesis of various plant secondary metabolites
sey01040  Biosynthesis of unsaturated fatty acids
sey01053  Biosynthesis of siderophore group nonribosomal peptides
KO pathway
ko01100   
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