KEGG   PATHWAY: smac01100
Entry
smac01100                   Pathway                                
Name
Metabolic pathways - Serratia marcescens subsp. marcescens Db11
Class
Pathway map
smac01100  Metabolic pathways
smac01100

Module
smac_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:smac01100]
smac_M00002  Glycolysis, core module involving three-carbon compounds [PATH:smac01100]
smac_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:smac01100]
smac_M00004  Pentose phosphate pathway (Pentose phosphate cycle) [PATH:smac01100]
smac_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:smac01100]
smac_M00006  Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:smac01100]
smac_M00007  Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:smac01100]
smac_M00008  Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:smac01100]
smac_M00009  Citrate cycle (TCA cycle, Krebs cycle) [PATH:smac01100]
smac_M00010  Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:smac01100]
smac_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:smac01100]
smac_M00012  Glyoxylate cycle [PATH:smac01100]
smac_M00015  Proline biosynthesis, glutamate => proline [PATH:smac01100]
smac_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:smac01100]
smac_M00017  Methionine biosynthesis, aspartate => homoserine => methionine [PATH:smac01100]
smac_M00018  Threonine biosynthesis, aspartate => homoserine => threonine [PATH:smac01100]
smac_M00019  Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:smac01100]
smac_M00020  Serine biosynthesis, glycerate-3P => serine [PATH:smac01100]
smac_M00021  Cysteine biosynthesis, serine => cysteine [PATH:smac01100]
smac_M00022  Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:smac01100]
smac_M00023  Tryptophan biosynthesis, chorismate => tryptophan [PATH:smac01100]
smac_M00024  Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine [PATH:smac01100]
smac_M00025  Tyrosine biosynthesis, chorismate => HPP => tyrosine [PATH:smac01100]
smac_M00026  Histidine biosynthesis, PRPP => histidine [PATH:smac01100]
smac_M00028  Ornithine biosynthesis, glutamate => ornithine [PATH:smac01100]
smac_M00034  Methionine salvage pathway [PATH:smac01100]
smac_M00045  Histidine degradation, histidine => N-formiminoglutamate => glutamate [PATH:smac01100]
smac_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:smac01100]
smac_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:smac01100]
smac_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:smac01100]
smac_M00051  De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP [PATH:smac01100]
smac_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:smac01100]
smac_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:smac01100]
smac_M00060  KDO2-lipid A biosynthesis, Raetz pathway, LpxL-LpxM type [PATH:smac01100]
smac_M00061  D-Glucuronate degradation, D-glucuronate => pyruvate + D-glyceraldehyde 3P [PATH:smac01100]
smac_M00063  CMP-KDO biosynthesis [PATH:smac01100]
smac_M00064  ADP-L-glycero-D-manno-heptose biosynthesis [PATH:smac01100]
smac_M00082  Fatty acid biosynthesis, initiation [PATH:smac01100]
smac_M00083  Fatty acid biosynthesis, elongation [PATH:smac01100]
smac_M00086  beta-Oxidation, acyl-CoA synthesis [PATH:smac01100]
smac_M00087  beta-Oxidation [PATH:smac01100]
smac_M00093  Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:smac01100]
smac_M00115  NAD biosynthesis, aspartate => quinolinate => NAD [PATH:smac01100]
smac_M00117  Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH:smac01100]
smac_M00118  Glutathione biosynthesis, glutamate => glutathione [PATH:smac01100]
smac_M00119  Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH:smac01100]
smac_M00120  Coenzyme A biosynthesis, pantothenate => CoA [PATH:smac01100]
smac_M00121  Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:smac01100]
smac_M00123  Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:smac01100]
smac_M00124  Pyridoxal-P biosynthesis, erythrose-4P => pyridoxal-P [PATH:smac01100]
smac_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:smac01100]
smac_M00126  Tetrahydrofolate biosynthesis, GTP => THF [PATH:smac01100]
smac_M00127  Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP [PATH:smac01100]
smac_M00133  Polyamine biosynthesis, arginine => agmatine => putrescine => spermidine [PATH:smac01100]
smac_M00136  GABA biosynthesis, prokaryotes, putrescine => GABA [PATH:smac01100]
smac_M00144  NADH:quinone oxidoreductase, prokaryotes [PATH:smac01100]
smac_M00149  Succinate dehydrogenase, prokaryotes [PATH:smac01100]
smac_M00150  Fumarate reductase, prokaryotes [PATH:smac01100]
smac_M00157  F-type ATPase, prokaryotes and chloroplasts [PATH:smac01100]
smac_M00168  CAM (Crassulacean acid metabolism), dark [PATH:smac01100]
smac_M00176  Assimilatory sulfate reduction, sulfate => H2S [PATH:smac01100]
smac_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:smac01100]
smac_M00338  Cysteine biosynthesis, homocysteine + serine => cysteine [PATH:smac01100]
smac_M00417  Cytochrome o ubiquinol oxidase [PATH:smac01100]
smac_M00432  Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:smac01100]
smac_M00530  Dissimilatory nitrate reduction, nitrate => ammonia [PATH:smac01100]
smac_M00549  Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:smac01100]
smac_M00554  Nucleotide sugar biosynthesis, galactose => UDP-galactose [PATH:smac01100]
smac_M00555  Betaine biosynthesis, choline => betaine [PATH:smac01100]
smac_M00570  Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:smac01100]
smac_M00579  Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate [PATH:smac01100]
smac_M00621  Glycine cleavage system [PATH:smac01100]
smac_M00622  Nicotinate degradation, nicotinate => fumarate [PATH:smac01100]
smac_M00632  Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P [PATH:smac01100]
smac_M00761  Undecaprenylphosphate alpha-L-Ara4N biosynthesis, UDP-GlcA => undecaprenyl phosphate alpha-L-Ara4N [PATH:smac01100]
smac_M00844  Arginine biosynthesis, ornithine => arginine [PATH:smac01100]
smac_M00846  Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH:smac01100]
smac_M00854  Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:smac01100]
smac_M00855  Glycogen degradation, glycogen => glucose-6P [PATH:smac01100]
smac_M00878  Phenylacetate degradation, phenylaxetate => acetyl-CoA/succinyl-CoA [PATH:smac01100]
smac_M00879  Arginine succinyltransferase pathway, arginine => glutamate [PATH:smac01100]
smac_M00880  Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:smac01100]
smac_M00881  Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:smac01100]
smac_M00899  Thiamine salvage pathway, HMP/HET => TMP [PATH:smac01100]
smac_M00909  UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:smac01100]
smac_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:smac01100]
smac_M00948  Hydroxyproline degradation, trans-4-hydroxy-L-proline => 2-oxoglutarate [PATH:smac01100]
smac_M00970  Proline degradation, proline => glutamate [PATH:smac01100]
Organism
Serratia marcescens subsp. marcescens Db11 [GN:smac]
Related
pathway
smac00010  Glycolysis / Gluconeogenesis
smac00020  Citrate cycle (TCA cycle)
smac00030  Pentose phosphate pathway
smac00040  Pentose and glucuronate interconversions
smac00051  Fructose and mannose metabolism
smac00052  Galactose metabolism
smac00053  Ascorbate and aldarate metabolism
smac00061  Fatty acid biosynthesis
smac00071  Fatty acid degradation
smac00130  Ubiquinone and other terpenoid-quinone biosynthesis
smac00190  Oxidative phosphorylation
smac00220  Arginine biosynthesis
smac00230  Purine metabolism
smac00240  Pyrimidine metabolism
smac00250  Alanine, aspartate and glutamate metabolism
smac00260  Glycine, serine and threonine metabolism
smac00261  Monobactam biosynthesis
smac00270  Cysteine and methionine metabolism
smac00280  Valine, leucine and isoleucine degradation
smac00290  Valine, leucine and isoleucine biosynthesis
smac00300  Lysine biosynthesis
smac00310  Lysine degradation
smac00330  Arginine and proline metabolism
smac00332  Carbapenem biosynthesis
smac00340  Histidine metabolism
smac00350  Tyrosine metabolism
smac00360  Phenylalanine metabolism
smac00361  Chlorocyclohexane and chlorobenzene degradation
smac00362  Benzoate degradation
smac00364  Fluorobenzoate degradation
smac00380  Tryptophan metabolism
smac00400  Phenylalanine, tyrosine and tryptophan biosynthesis
smac00401  Novobiocin biosynthesis
smac00410  beta-Alanine metabolism
smac00430  Taurine and hypotaurine metabolism
smac00440  Phosphonate and phosphinate metabolism
smac00450  Selenocompound metabolism
smac00460  Cyanoamino acid metabolism
smac00470  D-Amino acid metabolism
smac00480  Glutathione metabolism
smac00500  Starch and sucrose metabolism
smac00511  Other glycan degradation
smac00520  Amino sugar and nucleotide sugar metabolism
smac00521  Streptomycin biosynthesis
smac00523  Polyketide sugar unit biosynthesis
smac00525  Acarbose and validamycin biosynthesis
smac00540  Lipopolysaccharide biosynthesis
smac00541  O-Antigen nucleotide sugar biosynthesis
smac00542  O-Antigen repeat unit biosynthesis
smac00543  Exopolysaccharide biosynthesis
smac00550  Peptidoglycan biosynthesis
smac00552  Teichoic acid biosynthesis
smac00561  Glycerolipid metabolism
smac00562  Inositol phosphate metabolism
smac00564  Glycerophospholipid metabolism
smac00565  Ether lipid metabolism
smac00591  Linoleic acid metabolism
smac00592  alpha-Linolenic acid metabolism
smac00600  Sphingolipid metabolism
smac00620  Pyruvate metabolism
smac00623  Toluene degradation
smac00625  Chloroalkane and chloroalkene degradation
smac00626  Naphthalene degradation
smac00627  Aminobenzoate degradation
smac00630  Glyoxylate and dicarboxylate metabolism
smac00633  Nitrotoluene degradation
smac00640  Propanoate metabolism
smac00643  Styrene degradation
smac00650  Butanoate metabolism
smac00660  C5-Branched dibasic acid metabolism
smac00670  One carbon pool by folate
smac00680  Methane metabolism
smac00710  Carbon fixation by Calvin cycle
smac00720  Other carbon fixation pathways
smac00730  Thiamine metabolism
smac00740  Riboflavin metabolism
smac00750  Vitamin B6 metabolism
smac00760  Nicotinate and nicotinamide metabolism
smac00770  Pantothenate and CoA biosynthesis
smac00780  Biotin metabolism
smac00785  Lipoic acid metabolism
smac00790  Folate biosynthesis
smac00791  Atrazine degradation
smac00860  Porphyrin metabolism
smac00900  Terpenoid backbone biosynthesis
smac00907  Pinene, camphor and geraniol degradation
smac00910  Nitrogen metabolism
smac00920  Sulfur metabolism
smac00930  Caprolactam degradation
smac00946  Degradation of flavonoids
smac00997  Biosynthesis of various other secondary metabolites
smac00999  Biosynthesis of various plant secondary metabolites
smac01040  Biosynthesis of unsaturated fatty acids
smac01053  Biosynthesis of siderophore group nonribosomal peptides
KO pathway
ko01100   
LinkDB

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