PATHWAY: spyg01100 Help Entry spyg01100                   Pathway                                 Name Metabolic pathways - Sphingobium sp. YG1 Class BRITE hierarchy Pathway map spyg01100   Metabolic pathways Module spyg_M00002   Glycolysis, core module involving three-carbon compounds [PATH:spyg01100] spyg_M00003   Gluconeogenesis, oxaloacetate => fructose-6P [PATH:spyg01100] spyg_M00005   PRPP biosynthesis, ribose 5P => PRPP [PATH:spyg01100] spyg_M00007   Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:spyg01100] spyg_M00008   Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:spyg01100] spyg_M00009   Citrate cycle (TCA cycle, Krebs cycle) [PATH:spyg01100] spyg_M00010   Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:spyg01100] spyg_M00011   Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:spyg01100] spyg_M00012   Glyoxylate cycle [PATH:spyg01100] spyg_M00015   Proline biosynthesis, glutamate => proline [PATH:spyg01100] spyg_M00016   Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:spyg01100] spyg_M00018   Threonine biosynthesis, aspartate => homoserine => threonine [PATH:spyg01100] spyg_M00019   Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:spyg01100] spyg_M00020   Serine biosynthesis, glycerate-3P => serine [PATH:spyg01100] spyg_M00021   Cysteine biosynthesis, serine => cysteine [PATH:spyg01100] spyg_M00022   Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:spyg01100] spyg_M00023   Tryptophan biosynthesis, chorismate => tryptophan [PATH:spyg01100] spyg_M00026   Histidine biosynthesis, PRPP => histidine [PATH:spyg01100] spyg_M00028   Ornithine biosynthesis, glutamate => ornithine [PATH:spyg01100] spyg_M00048   De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:spyg01100] spyg_M00049   Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:spyg01100] spyg_M00050   Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:spyg01100] spyg_M00052   Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:spyg01100] spyg_M00053   Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:spyg01100] spyg_M00061   D-Glucuronate degradation, D-glucuronate => pyruvate + D-glyceraldehyde 3P [PATH:spyg01100] spyg_M00082   Fatty acid biosynthesis, initiation [PATH:spyg01100] spyg_M00083   Fatty acid biosynthesis, elongation [PATH:spyg01100] spyg_M00086   beta-Oxidation, acyl-CoA synthesis [PATH:spyg01100] spyg_M00087   beta-Oxidation [PATH:spyg01100] spyg_M00091   Phosphatidylcholine (PC) biosynthesis, PE => PC [PATH:spyg01100] spyg_M00093   Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:spyg01100] spyg_M00115   NAD biosynthesis, aspartate => quinolinate => NAD [PATH:spyg01100] spyg_M00118   Glutathione biosynthesis, glutamate => glutathione [PATH:spyg01100] spyg_M00120   Coenzyme A biosynthesis, pantothenate => CoA [PATH:spyg01100] spyg_M00122   Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH:spyg01100] spyg_M00123   Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:spyg01100] spyg_M00144   NADH:quinone oxidoreductase, prokaryotes [PATH:spyg01100] spyg_M00149   Succinate dehydrogenase, prokaryotes [PATH:spyg01100] spyg_M00151   Cytochrome bc1 complex respiratory unit [PATH:spyg01100] spyg_M00155   Cytochrome c oxidase, prokaryotes [PATH:spyg01100] spyg_M00156   Cytochrome c oxidase, cbb3-type [PATH:spyg01100] spyg_M00157   F-type ATPase, prokaryotes and chloroplasts [PATH:spyg01100] spyg_M00168   CAM (Crassulacean acid metabolism), dark [PATH:spyg01100] spyg_M00169   CAM (Crassulacean acid metabolism), light [PATH:spyg01100] spyg_M00176   Assimilatory sulfate reduction, sulfate => H2S [PATH:spyg01100] spyg_M00307   Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:spyg01100] spyg_M00417   Cytochrome o ubiquinol oxidase [PATH:spyg01100] spyg_M00432   Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:spyg01100] spyg_M00531   Assimilatory nitrate reduction, nitrate => ammonia [PATH:spyg01100] spyg_M00549   Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:spyg01100] spyg_M00565   Trehalose biosynthesis, D-glucose 1P => trehalose [PATH:spyg01100] spyg_M00570   Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:spyg01100] spyg_M00579   Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate [PATH:spyg01100] spyg_M00621   Glycine cleavage system [PATH:spyg01100] spyg_M00741   Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA [PATH:spyg01100] spyg_M00793   dTDP-L-rhamnose biosynthesis [PATH:spyg01100] spyg_M00844   Arginine biosynthesis, ornithine => arginine [PATH:spyg01100] spyg_M00854   Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:spyg01100] spyg_M00855   Glycogen degradation, glycogen => glucose-6P [PATH:spyg01100] spyg_M00880   Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:spyg01100] spyg_M00881   Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:spyg01100] spyg_M00909   UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:spyg01100] spyg_M00938   Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:spyg01100] spyg_M00958   Adenine ribonucleotide degradation, AMP => Urate [PATH:spyg01100] spyg_M00970   Proline degradation, proline => glutamate [PATH:spyg01100] Organism Sphingobium sp. YG1 [GN:spyg] Related pathway spyg00010   Glycolysis / Gluconeogenesis spyg00020   Citrate cycle (TCA cycle) spyg00030   Pentose phosphate pathway spyg00040   Pentose and glucuronate interconversions spyg00051   Fructose and mannose metabolism spyg00052   Galactose metabolism spyg00053   Ascorbate and aldarate metabolism spyg00061   Fatty acid biosynthesis spyg00062   Fatty acid elongation spyg00071   Fatty acid degradation spyg00100   Steroid biosynthesis spyg00130   Ubiquinone and other terpenoid-quinone biosynthesis spyg00190   Oxidative phosphorylation spyg00220   Arginine biosynthesis spyg00230   Purine metabolism spyg00240   Pyrimidine metabolism spyg00250   Alanine, aspartate and glutamate metabolism spyg00260   Glycine, serine and threonine metabolism spyg00261   Monobactam biosynthesis spyg00270   Cysteine and methionine metabolism spyg00280   Valine, leucine and isoleucine degradation spyg00290   Valine, leucine and isoleucine biosynthesis spyg00300   Lysine biosynthesis spyg00310   Lysine degradation spyg00330   Arginine and proline metabolism spyg00332   Carbapenem biosynthesis spyg00340   Histidine metabolism spyg00350   Tyrosine metabolism spyg00360   Phenylalanine metabolism spyg00361   Chlorocyclohexane and chlorobenzene degradation spyg00362   Benzoate degradation spyg00364   Fluorobenzoate degradation spyg00380   Tryptophan metabolism spyg00400   Phenylalanine, tyrosine and tryptophan biosynthesis spyg00401   Novobiocin biosynthesis spyg00410   beta-Alanine metabolism spyg00430   Taurine and hypotaurine metabolism spyg00450   Selenocompound metabolism spyg00460   Cyanoamino acid metabolism spyg00470   D-Amino acid metabolism spyg00480   Glutathione metabolism spyg00500   Starch and sucrose metabolism spyg00511   Other glycan degradation spyg00520   Amino sugar and nucleotide sugar metabolism spyg00521   Streptomycin biosynthesis spyg00523   Polyketide sugar unit biosynthesis spyg00525   Acarbose and validamycin biosynthesis spyg00540   Lipopolysaccharide biosynthesis spyg00541   O-Antigen nucleotide sugar biosynthesis spyg00543   Exopolysaccharide biosynthesis spyg00550   Peptidoglycan biosynthesis spyg00552   Teichoic acid biosynthesis spyg00561   Glycerolipid metabolism spyg00562   Inositol phosphate metabolism spyg00564   Glycerophospholipid metabolism spyg00565   Ether lipid metabolism spyg00592   alpha-Linolenic acid metabolism spyg00600   Sphingolipid metabolism spyg00620   Pyruvate metabolism spyg00622   Xylene degradation spyg00623   Toluene degradation spyg00624   Polycyclic aromatic hydrocarbon degradation spyg00625   Chloroalkane and chloroalkene degradation spyg00626   Naphthalene degradation spyg00627   Aminobenzoate degradation spyg00630   Glyoxylate and dicarboxylate metabolism spyg00633   Nitrotoluene degradation spyg00640   Propanoate metabolism spyg00643   Styrene degradation spyg00650   Butanoate metabolism spyg00660   C5-Branched dibasic acid metabolism spyg00670   One carbon pool by folate spyg00680   Methane metabolism spyg00710   Carbon fixation by Calvin cycle spyg00720   Other carbon fixation pathways spyg00730   Thiamine metabolism spyg00740   Riboflavin metabolism spyg00750   Vitamin B6 metabolism spyg00760   Nicotinate and nicotinamide metabolism spyg00770   Pantothenate and CoA biosynthesis spyg00780   Biotin metabolism spyg00785   Lipoic acid metabolism spyg00790   Folate biosynthesis spyg00860   Porphyrin metabolism spyg00900   Terpenoid backbone biosynthesis spyg00903   Limonene degradation spyg00906   Carotenoid biosynthesis spyg00907   Pinene, camphor and geraniol degradation spyg00910   Nitrogen metabolism spyg00920   Sulfur metabolism spyg00930   Caprolactam degradation spyg00946   Degradation of flavonoids spyg00996   Biosynthesis of various alkaloids spyg00999   Biosynthesis of various plant secondary metabolites spyg01040   Biosynthesis of unsaturated fatty acids KO pathway ko01100     LinkDB All DBs

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