KEGG   PATHWAY: spyg00010
Entry
spyg00010                   Pathway                                
Name
Glycolysis / Gluconeogenesis - Sphingobium sp. YG1
Description
Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which sometimes contains operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].
Class
Metabolism; Carbohydrate metabolism
Pathway map
spyg00010  Glycolysis / Gluconeogenesis
spyg00010

Module
spyg_M00002  Glycolysis, core module involving three-carbon compounds [PATH:spyg00010]
spyg_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:spyg00010]
spyg_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:spyg00010]
Other DBs
GO: 0006096 0006094
Organism
Sphingobium sp. YG1 [GN:spyg]
Gene
YGS_C1P0415  glucokinase [KO:K00845] [EC:2.7.1.2]
YGS_C1P1086  glucose-6-phosphate isomerase [KO:K01810] [EC:5.3.1.9]
YGS_C1P3215  fructose-1,6-bisphosphatase I [KO:K03841] [EC:3.1.3.11]
YGS_C1P2892  fructose-1,6-bisphosphatase II/sedoheptulose-1,7-bisphosphatase [KO:K11532] [EC:3.1.3.11 3.1.3.37]
YGS_C1P1239  fructose-bisphosphate aldolase, class I [KO:K01623] [EC:4.1.2.13]
YGS_C1P1545  triosephosphate isomerase [KO:K01803] [EC:5.3.1.1]
YGS_C1P1242  glyceraldehyde 3-phosphate dehydrogenase [KO:K00134] [EC:1.2.1.12]
YGS_C1P1241  phosphoglycerate kinase [KO:K00927] [EC:2.7.2.3]
YGS_C1P1463  2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [KO:K01834] [EC:5.4.2.11]
YGS_C1P0584  enolase [KO:K01689] [EC:4.2.1.11]
YGS_C1P1881  pyruvate kinase [KO:K00873] [EC:2.7.1.40]
YGS_C1P1021  pyruvate, orthophosphate dikinase [KO:K01006] [EC:2.7.9.1]
YGS_C1P1339  pyruvate, orthophosphate dikinase [KO:K01006] [EC:2.7.9.1]
YGS_C1P0586  pyruvate dehydrogenase E1 component alpha subunit [KO:K00161] [EC:1.2.4.1]
YGS_C1P0587  pyruvate dehydrogenase E1 component beta subunit [KO:K00162] [EC:1.2.4.1]
YGS_C1P0940  dihydrolipoyllysine-residue acetyltransferase [KO:K00627] [EC:2.3.1.12]
YGS_C1P0942  dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
YGS_C1P0322  dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
YGS_C2P0573  S-(hydroxymethyl)glutathione dehydrogenase/alcohol dehydrogenase [KO:K00121] [EC:1.1.1.284 1.1.1.1]
YGS_C2P1004  S-(hydroxymethyl)glutathione dehydrogenase/alcohol dehydrogenase [KO:K00121] [EC:1.1.1.284 1.1.1.1]
YGS_C1P0882  hypothetical protein [KO:K13979] [EC:1.1.1.2]
YGS_C1P2668  alcohol dehydrogenase (cytochrome c) [KO:K00114] [EC:1.1.2.8]
YGS_C1P1170  aldehyde dehydrogenase (NAD(+)) [KO:K00128] [EC:1.2.1.3]
YGS_C2P0721  aldehyde dehydrogenase (NAD(+)) [KO:K00128] [EC:1.2.1.3]
YGS_C2P1470  aldehyde dehydrogenase (NAD(+)) [KO:K00128] [EC:1.2.1.3]
YGS_C1P2757  aldehyde dehydrogenase (NAD(+)) [KO:K00128] [EC:1.2.1.3]
YGS_C2P0406  aldehyde dehydrogenase (NAD(+)) [KO:K00128] [EC:1.2.1.3]
YGS_C2P0562  hypothetical protein [KO:K00128] [EC:1.2.1.3]
YGS_C2P0067  hypothetical protein [KO:K00128] [EC:1.2.1.3]
YGS_C1P2674  aldehyde dehydrogenase [KO:K00138] [EC:1.2.1.-]
YGS_C1P2242  acetyl-CoA synthetase [KO:K01895] [EC:6.2.1.1]
YGS_C2P0005  acetyl-CoA synthetase [KO:K01895] [EC:6.2.1.1]
YGS_C2P0025  hypothetical protein [KO:K24012] [EC:6.2.1.13]
YGS_C1P2073  aldose 1-epimerase [KO:K01785] [EC:5.1.3.3]
YGS_C2P1111  aldose 1-epimerase [KO:K01785] [EC:5.1.3.3]
YGS_C1P1014  phosphoglucomutase [KO:K01835] [EC:5.4.2.2]
YGS_C1P0049  phosphoenolpyruvate carboxykinase (ATP) [KO:K01610] [EC:4.1.1.49]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00031  D-Glucose
C00033  Acetate
C00036  Oxaloacetate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00084  Acetaldehyde
C00085  D-Fructose 6-phosphate
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00186  (S)-Lactate
C00197  3-Phospho-D-glycerate
C00221  beta-D-Glucose
C00236  3-Phospho-D-glyceroyl phosphate
C00267  alpha-D-Glucose
C00354  D-Fructose 1,6-bisphosphate
C00469  Ethanol
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C01159  2,3-Bisphospho-D-glycerate
C01172  beta-D-Glucose 6-phosphate
C01451  Salicin
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C06186  Arbutin
C06187  Arbutin 6-phosphate
C06188  Salicin 6-phosphate
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
spyg00020  Citrate cycle (TCA cycle)
spyg00030  Pentose phosphate pathway
spyg00500  Starch and sucrose metabolism
spyg00620  Pyruvate metabolism
spyg00640  Propanoate metabolism
spyg00710  Carbon fixation by Calvin cycle
KO pathway
ko00010   
LinkDB

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