PATHWAY: squ01100 Help Entry squ01100                    Pathway                                 Name Metabolic pathways - Serratia quinivorans Class BRITE hierarchy Pathway map squ01100   Metabolic pathways Module squ_M00001   Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:squ01100] squ_M00002   Glycolysis, core module involving three-carbon compounds [PATH:squ01100] squ_M00003   Gluconeogenesis, oxaloacetate => fructose-6P [PATH:squ01100] squ_M00004   Pentose phosphate pathway (Pentose phosphate cycle) [PATH:squ01100] squ_M00005   PRPP biosynthesis, ribose 5P => PRPP [PATH:squ01100] squ_M00006   Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:squ01100] squ_M00007   Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:squ01100] squ_M00008   Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:squ01100] squ_M00009   Citrate cycle (TCA cycle, Krebs cycle) [PATH:squ01100] squ_M00010   Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:squ01100] squ_M00011   Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:squ01100] squ_M00012   Glyoxylate cycle [PATH:squ01100] squ_M00015   Proline biosynthesis, glutamate => proline [PATH:squ01100] squ_M00016   Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:squ01100] squ_M00017   Methionine biosynthesis, aspartate => homoserine => methionine [PATH:squ01100] squ_M00018   Threonine biosynthesis, aspartate => homoserine => threonine [PATH:squ01100] squ_M00019   Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:squ01100] squ_M00020   Serine biosynthesis, glycerate-3P => serine [PATH:squ01100] squ_M00021   Cysteine biosynthesis, serine => cysteine [PATH:squ01100] squ_M00022   Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:squ01100] squ_M00024   Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine [PATH:squ01100] squ_M00025   Tyrosine biosynthesis, chorismate => HPP => tyrosine [PATH:squ01100] squ_M00026   Histidine biosynthesis, PRPP => histidine [PATH:squ01100] squ_M00028   Ornithine biosynthesis, glutamate => ornithine [PATH:squ01100] squ_M00045   Histidine degradation, histidine => N-formiminoglutamate => glutamate [PATH:squ01100] squ_M00048   De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:squ01100] squ_M00049   Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:squ01100] squ_M00050   Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:squ01100] squ_M00051   De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP [PATH:squ01100] squ_M00052   Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:squ01100] squ_M00053   Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:squ01100] squ_M00060   KDO2-lipid A biosynthesis, Raetz pathway, LpxL-LpxM type [PATH:squ01100] squ_M00061   D-Glucuronate degradation, D-glucuronate => pyruvate + D-glyceraldehyde 3P [PATH:squ01100] squ_M00063   CMP-KDO biosynthesis [PATH:squ01100] squ_M00064   ADP-L-glycero-D-manno-heptose biosynthesis [PATH:squ01100] squ_M00082   Fatty acid biosynthesis, initiation [PATH:squ01100] squ_M00083   Fatty acid biosynthesis, elongation [PATH:squ01100] squ_M00086   beta-Oxidation, acyl-CoA synthesis [PATH:squ01100] squ_M00087   beta-Oxidation [PATH:squ01100] squ_M00093   Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:squ01100] squ_M00096   C5 isoprenoid biosynthesis, non-mevalonate pathway [PATH:squ01100] squ_M00115   NAD biosynthesis, aspartate => quinolinate => NAD [PATH:squ01100] squ_M00116   Menaquinone biosynthesis, chorismate (+ polyprenyl-PP) => menaquinol [PATH:squ01100] squ_M00117   Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH:squ01100] squ_M00118   Glutathione biosynthesis, glutamate => glutathione [PATH:squ01100] squ_M00119   Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH:squ01100] squ_M00120   Coenzyme A biosynthesis, pantothenate => CoA [PATH:squ01100] squ_M00121   Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:squ01100] squ_M00123   Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:squ01100] squ_M00124   Pyridoxal-P biosynthesis, erythrose-4P => pyridoxal-P [PATH:squ01100] squ_M00125   Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:squ01100] squ_M00126   Tetrahydrofolate biosynthesis, GTP => THF [PATH:squ01100] squ_M00127   Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP [PATH:squ01100] squ_M00133   Polyamine biosynthesis, arginine => agmatine => putrescine => spermidine [PATH:squ01100] squ_M00136   GABA biosynthesis, prokaryotes, putrescine => GABA [PATH:squ01100] squ_M00144   NADH:quinone oxidoreductase, prokaryotes [PATH:squ01100] squ_M00149   Succinate dehydrogenase, prokaryotes [PATH:squ01100] squ_M00150   Fumarate reductase, prokaryotes [PATH:squ01100] squ_M00157   F-type ATPase, prokaryotes and chloroplasts [PATH:squ01100] squ_M00168   CAM (Crassulacean acid metabolism), dark [PATH:squ01100] squ_M00176   Assimilatory sulfate reduction, sulfate => H2S [PATH:squ01100] squ_M00307   Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:squ01100] squ_M00338   Cysteine biosynthesis, homocysteine + serine => cysteine [PATH:squ01100] squ_M00364   C10-C20 isoprenoid biosynthesis, bacteria [PATH:squ01100] squ_M00417   Cytochrome o ubiquinol oxidase [PATH:squ01100] squ_M00432   Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:squ01100] squ_M00530   Dissimilatory nitrate reduction, nitrate => ammonia [PATH:squ01100] squ_M00533   Homoprotocatechuate degradation, homoprotocatechuate => 2-oxohept-3-enedioate [PATH:squ01100] squ_M00552   D-galactonate degradation, De Ley-Doudoroff pathway, D-galactonate => glycerate-3P [PATH:squ01100] squ_M00554   Nucleotide sugar biosynthesis, galactose => UDP-galactose [PATH:squ01100] squ_M00555   Betaine biosynthesis, choline => betaine [PATH:squ01100] squ_M00570   Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:squ01100] squ_M00579   Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate [PATH:squ01100] squ_M00621   Glycine cleavage system [PATH:squ01100] squ_M00622   Nicotinate degradation, nicotinate => fumarate [PATH:squ01100] squ_M00632   Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P [PATH:squ01100] squ_M00761   Undecaprenylphosphate alpha-L-Ara4N biosynthesis, UDP-GlcA => undecaprenyl phosphate alpha-L-Ara4N [PATH:squ01100] squ_M00844   Arginine biosynthesis, ornithine => arginine [PATH:squ01100] squ_M00846   Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH:squ01100] squ_M00854   Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:squ01100] squ_M00878   Phenylacetate degradation, phenylaxetate => acetyl-CoA/succinyl-CoA [PATH:squ01100] squ_M00879   Arginine succinyltransferase pathway, arginine => glutamate [PATH:squ01100] squ_M00880   Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:squ01100] squ_M00881   Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:squ01100] squ_M00899   Thiamine salvage pathway, HMP/HET => TMP [PATH:squ01100] squ_M00909   UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:squ01100] squ_M00918   Aerobactin biosynthesis, lysine => aerobactin [PATH:squ01100] squ_M00938   Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:squ01100] squ_M00939   Pyrimidine degradation, uracil => 3-hydroxypropanoate [PATH:squ01100] squ_M00958   Adenine ribonucleotide degradation, AMP => Urate [PATH:squ01100] squ_M00959   Guanine ribonucleotide degradation, GMP => Urate [PATH:squ01100] squ_M00970   Proline degradation, proline => glutamate [PATH:squ01100] Organism Serratia quinivorans [GN:squ] Related pathway squ00010   Glycolysis / Gluconeogenesis squ00020   Citrate cycle (TCA cycle) squ00030   Pentose phosphate pathway squ00040   Pentose and glucuronate interconversions squ00051   Fructose and mannose metabolism squ00052   Galactose metabolism squ00053   Ascorbate and aldarate metabolism squ00061   Fatty acid biosynthesis squ00071   Fatty acid degradation squ00074   Mycolic acid biosynthesis squ00130   Ubiquinone and other terpenoid-quinone biosynthesis squ00190   Oxidative phosphorylation squ00220   Arginine biosynthesis squ00230   Purine metabolism squ00240   Pyrimidine metabolism squ00250   Alanine, aspartate and glutamate metabolism squ00260   Glycine, serine and threonine metabolism squ00261   Monobactam biosynthesis squ00270   Cysteine and methionine metabolism squ00280   Valine, leucine and isoleucine degradation squ00290   Valine, leucine and isoleucine biosynthesis squ00300   Lysine biosynthesis squ00310   Lysine degradation squ00330   Arginine and proline metabolism squ00332   Carbapenem biosynthesis squ00340   Histidine metabolism squ00350   Tyrosine metabolism squ00360   Phenylalanine metabolism squ00361   Chlorocyclohexane and chlorobenzene degradation squ00362   Benzoate degradation squ00364   Fluorobenzoate degradation squ00380   Tryptophan metabolism squ00400   Phenylalanine, tyrosine and tryptophan biosynthesis squ00401   Novobiocin biosynthesis squ00410   beta-Alanine metabolism squ00430   Taurine and hypotaurine metabolism squ00440   Phosphonate and phosphinate metabolism squ00450   Selenocompound metabolism squ00460   Cyanoamino acid metabolism squ00470   D-Amino acid metabolism squ00480   Glutathione metabolism squ00500   Starch and sucrose metabolism squ00511   Other glycan degradation squ00520   Amino sugar and nucleotide sugar metabolism squ00521   Streptomycin biosynthesis squ00523   Polyketide sugar unit biosynthesis squ00525   Acarbose and validamycin biosynthesis squ00540   Lipopolysaccharide biosynthesis squ00541   O-Antigen nucleotide sugar biosynthesis squ00542   O-Antigen repeat unit biosynthesis squ00543   Exopolysaccharide biosynthesis squ00550   Peptidoglycan biosynthesis squ00552   Teichoic acid biosynthesis squ00561   Glycerolipid metabolism squ00562   Inositol phosphate metabolism squ00564   Glycerophospholipid metabolism squ00565   Ether lipid metabolism squ00591   Linoleic acid metabolism squ00592   alpha-Linolenic acid metabolism squ00600   Sphingolipid metabolism squ00620   Pyruvate metabolism squ00621   Dioxin degradation squ00622   Xylene degradation squ00623   Toluene degradation squ00625   Chloroalkane and chloroalkene degradation squ00626   Naphthalene degradation squ00627   Aminobenzoate degradation squ00630   Glyoxylate and dicarboxylate metabolism squ00633   Nitrotoluene degradation squ00640   Propanoate metabolism squ00643   Styrene degradation squ00650   Butanoate metabolism squ00660   C5-Branched dibasic acid metabolism squ00670   One carbon pool by folate squ00680   Methane metabolism squ00710   Carbon fixation by Calvin cycle squ00720   Other carbon fixation pathways squ00730   Thiamine metabolism squ00740   Riboflavin metabolism squ00750   Vitamin B6 metabolism squ00760   Nicotinate and nicotinamide metabolism squ00770   Pantothenate and CoA biosynthesis squ00780   Biotin metabolism squ00785   Lipoic acid metabolism squ00790   Folate biosynthesis squ00791   Atrazine degradation squ00860   Porphyrin metabolism squ00900   Terpenoid backbone biosynthesis squ00907   Pinene, camphor and geraniol degradation squ00910   Nitrogen metabolism squ00920   Sulfur metabolism squ00930   Caprolactam degradation squ00946   Degradation of flavonoids squ00997   Biosynthesis of various other secondary metabolites squ00999   Biosynthesis of various plant secondary metabolites squ01040   Biosynthesis of unsaturated fatty acids squ01053   Biosynthesis of siderophore group nonribosomal peptides KO pathway ko01100     LinkDB All DBs

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