PATHWAY: srai01100 Help Entry srai01100                   Pathway                                 Name Metabolic pathways - Staphylococcus ratti Class BRITE hierarchy Pathway map srai01100   Metabolic pathways Module srai_M00001   Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:srai01100] srai_M00002   Glycolysis, core module involving three-carbon compounds [PATH:srai01100] srai_M00003   Gluconeogenesis, oxaloacetate => fructose-6P [PATH:srai01100] srai_M00004   Pentose phosphate pathway (Pentose phosphate cycle) [PATH:srai01100] srai_M00005   PRPP biosynthesis, ribose 5P => PRPP [PATH:srai01100] srai_M00006   Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:srai01100] srai_M00007   Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:srai01100] srai_M00009   Citrate cycle (TCA cycle, Krebs cycle) [PATH:srai01100] srai_M00010   Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:srai01100] srai_M00011   Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:srai01100] srai_M00017   Methionine biosynthesis, aspartate => homoserine => methionine [PATH:srai01100] srai_M00018   Threonine biosynthesis, aspartate => homoserine => threonine [PATH:srai01100] srai_M00019   Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:srai01100] srai_M00021   Cysteine biosynthesis, serine => cysteine [PATH:srai01100] srai_M00023   Tryptophan biosynthesis, chorismate => tryptophan [PATH:srai01100] srai_M00045   Histidine degradation, histidine => N-formiminoglutamate => glutamate [PATH:srai01100] srai_M00048   De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:srai01100] srai_M00049   Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:srai01100] srai_M00050   Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:srai01100] srai_M00052   Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:srai01100] srai_M00053   Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:srai01100] srai_M00082   Fatty acid biosynthesis, initiation [PATH:srai01100] srai_M00083   Fatty acid biosynthesis, elongation [PATH:srai01100] srai_M00086   beta-Oxidation, acyl-CoA synthesis [PATH:srai01100] srai_M00096   C5 isoprenoid biosynthesis, non-mevalonate pathway [PATH:srai01100] srai_M00116   Menaquinone biosynthesis, chorismate (+ polyprenyl-PP) => menaquinol [PATH:srai01100] srai_M00119   Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH:srai01100] srai_M00120   Coenzyme A biosynthesis, pantothenate => CoA [PATH:srai01100] srai_M00123   Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:srai01100] srai_M00125   Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:srai01100] srai_M00126   Tetrahydrofolate biosynthesis, GTP => THF [PATH:srai01100] srai_M00140   C1-unit interconversion, prokaryotes [PATH:srai01100] srai_M00157   F-type ATPase, prokaryotes and chloroplasts [PATH:srai01100] srai_M00176   Assimilatory sulfate reduction, sulfate => H2S [PATH:srai01100] srai_M00307   Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:srai01100] srai_M00345   Formaldehyde assimilation, ribulose monophosphate pathway [PATH:srai01100] srai_M00364   C10-C20 isoprenoid biosynthesis, bacteria [PATH:srai01100] srai_M00416   Cytochrome aa3-600 menaquinol oxidase [PATH:srai01100] srai_M00432   Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:srai01100] srai_M00549   Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:srai01100] srai_M00555   Betaine biosynthesis, choline => betaine [PATH:srai01100] srai_M00570   Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:srai01100] srai_M00577   Biotin biosynthesis, BioW pathway, pimelate => pimeloyl-CoA => biotin [PATH:srai01100] srai_M00579   Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate [PATH:srai01100] srai_M00580   Pentose phosphate pathway, archaea, fructose 6P => ribose 5P [PATH:srai01100] srai_M00621   Glycine cleavage system [PATH:srai01100] srai_M00844   Arginine biosynthesis, ornithine => arginine [PATH:srai01100] srai_M00875   Staphyloferrin B biosynthesis, L-serine => staphyloferrin B [PATH:srai01100] srai_M00876   Staphyloferrin A biosynthesis, L-ornithine => staphyloferrin A [PATH:srai01100] srai_M00880   Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:srai01100] srai_M00883   Lipoic acid biosynthesis, animals and bacteria, octanoyl-ACP => dihydrolipoyl-H => dihydrolipoyl-E2 [PATH:srai01100] srai_M00899   Thiamine salvage pathway, HMP/HET => TMP [PATH:srai01100] srai_M00909   UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:srai01100] srai_M00916   Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P [PATH:srai01100] srai_M00926   Heme biosynthesis, bacteria, glutamyl-tRNA => coproporphyrin III => heme [PATH:srai01100] srai_M00949   Staphylopine biosynthesis, L-histidine => staphylopine [PATH:srai01100] srai_M00970   Proline degradation, proline => glutamate [PATH:srai01100] srai_M00972   Proline metabolism [PATH:srai01100] Organism Staphylococcus ratti [GN:srai] Related pathway srai00010   Glycolysis / Gluconeogenesis srai00020   Citrate cycle (TCA cycle) srai00030   Pentose phosphate pathway srai00040   Pentose and glucuronate interconversions srai00051   Fructose and mannose metabolism srai00052   Galactose metabolism srai00053   Ascorbate and aldarate metabolism srai00061   Fatty acid biosynthesis srai00071   Fatty acid degradation srai00130   Ubiquinone and other terpenoid-quinone biosynthesis srai00190   Oxidative phosphorylation srai00220   Arginine biosynthesis srai00230   Purine metabolism srai00240   Pyrimidine metabolism srai00250   Alanine, aspartate and glutamate metabolism srai00260   Glycine, serine and threonine metabolism srai00261   Monobactam biosynthesis srai00270   Cysteine and methionine metabolism srai00280   Valine, leucine and isoleucine degradation srai00290   Valine, leucine and isoleucine biosynthesis srai00300   Lysine biosynthesis srai00310   Lysine degradation srai00330   Arginine and proline metabolism srai00340   Histidine metabolism srai00350   Tyrosine metabolism srai00360   Phenylalanine metabolism srai00362   Benzoate degradation srai00380   Tryptophan metabolism srai00400   Phenylalanine, tyrosine and tryptophan biosynthesis srai00401   Novobiocin biosynthesis srai00410   beta-Alanine metabolism srai00430   Taurine and hypotaurine metabolism srai00450   Selenocompound metabolism srai00460   Cyanoamino acid metabolism srai00470   D-Amino acid metabolism srai00480   Glutathione metabolism srai00500   Starch and sucrose metabolism srai00520   Amino sugar and nucleotide sugar metabolism srai00521   Streptomycin biosynthesis srai00541   O-Antigen nucleotide sugar biosynthesis srai00542   O-Antigen repeat unit biosynthesis srai00543   Exopolysaccharide biosynthesis srai00550   Peptidoglycan biosynthesis srai00552   Teichoic acid biosynthesis srai00561   Glycerolipid metabolism srai00562   Inositol phosphate metabolism srai00564   Glycerophospholipid metabolism srai00592   alpha-Linolenic acid metabolism srai00620   Pyruvate metabolism srai00622   Xylene degradation srai00625   Chloroalkane and chloroalkene degradation srai00626   Naphthalene degradation srai00630   Glyoxylate and dicarboxylate metabolism srai00640   Propanoate metabolism srai00650   Butanoate metabolism srai00660   C5-Branched dibasic acid metabolism srai00670   One carbon pool by folate srai00680   Methane metabolism srai00710   Carbon fixation by Calvin cycle srai00720   Other carbon fixation pathways srai00730   Thiamine metabolism srai00740   Riboflavin metabolism srai00750   Vitamin B6 metabolism srai00760   Nicotinate and nicotinamide metabolism srai00770   Pantothenate and CoA biosynthesis srai00780   Biotin metabolism srai00785   Lipoic acid metabolism srai00790   Folate biosynthesis srai00860   Porphyrin metabolism srai00900   Terpenoid backbone biosynthesis srai00907   Pinene, camphor and geraniol degradation srai00910   Nitrogen metabolism srai00920   Sulfur metabolism srai00997   Biosynthesis of various other secondary metabolites srai00998   Biosynthesis of various antibiotics KO pathway ko01100     LinkDB All DBs

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