KEGG   PATHWAY: srai00010
Entry
srai00010                   Pathway                                
Name
Glycolysis / Gluconeogenesis - Staphylococcus ratti
Description
Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which sometimes contains operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].
Class
Metabolism; Carbohydrate metabolism
Pathway map
srai00010  Glycolysis / Gluconeogenesis
srai00010

Module
srai_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:srai00010]
srai_M00002  Glycolysis, core module involving three-carbon compounds [PATH:srai00010]
srai_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:srai00010]
srai_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:srai00010]
Other DBs
GO: 0006096 0006094
Organism
Staphylococcus ratti [GN:srai]
Gene
LN051_00290  [KO:K00016] [EC:1.1.1.27]
LN051_00350  [KO:K01223] [EC:3.2.1.86]
LN051_00590  [KO:K01895] [EC:6.2.1.1]
LN051_00930  [KO:K01623] [EC:4.1.2.13]
LN051_01775  [KO:K04041] [EC:3.1.3.11]
LN051_02040  [KO:K00001] [EC:1.1.1.1]
LN051_03160  [KO:K01624] [EC:4.1.2.13]
LN051_03175  [KO:K00128] [EC:1.2.1.3]
LN051_04565  pckA; phosphoenolpyruvate carboxykinase (ATP) [KO:K01610] [EC:4.1.1.49]
LN051_04700  [KO:K00016] [EC:1.1.1.27]
LN051_04845  acsA; acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
LN051_05015  pfkA; 6-phosphofructokinase [KO:K00850] [EC:2.7.1.11]
LN051_05020  pyk; pyruvate kinase [KO:K00873] [EC:2.7.1.40]
LN051_05060  [KO:K00150] [EC:1.2.1.59]
LN051_05425  [KO:K01834] [EC:5.4.2.11]
LN051_05725  [KO:K25026]
LN051_05870  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
LN051_06240  [KO:K02777] [EC:2.7.1.-]
LN051_06450  ptsG; glucose-specific PTS transporter subunit IIBC [KO:K20118] [EC:2.7.1.199]
LN051_06790  [KO:K00175] [EC:1.2.7.3 1.2.7.11]
LN051_06795  [KO:K00174] [EC:1.2.7.3 1.2.7.11]
LN051_07715  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
LN051_07720  [KO:K00627] [EC:2.3.1.12]
LN051_07725  [KO:K00162] [EC:1.2.4.1]
LN051_07730  pdhA; pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha [KO:K00161] [EC:1.2.4.1]
LN051_07975  [KO:K01835] [EC:5.4.2.2]
LN051_08420  [KO:K01810] [EC:5.3.1.9]
LN051_08795  eno; phosphopyruvate hydratase [KO:K01689] [EC:4.2.1.11]
LN051_08800  gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [KO:K15633] [EC:5.4.2.12]
LN051_08805  tpiA; triose-phosphate isomerase [KO:K01803] [EC:5.3.1.1]
LN051_08810  [KO:K00927] [EC:2.7.2.3]
LN051_08815  gap; type I glyceraldehyde-3-phosphate dehydrogenase [KO:K00134] [EC:1.2.1.12]
LN051_10100  ptsG; glucose-specific PTS transporter subunit IIBC [KO:K02791] [EC:2.7.1.199 2.7.1.208]
LN051_10810  ppdK; pyruvate, phosphate dikinase [KO:K01006] [EC:2.7.9.1]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00031  D-Glucose
C00033  Acetate
C00036  Oxaloacetate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00084  Acetaldehyde
C00085  D-Fructose 6-phosphate
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00186  (S)-Lactate
C00197  3-Phospho-D-glycerate
C00221  beta-D-Glucose
C00236  3-Phospho-D-glyceroyl phosphate
C00267  alpha-D-Glucose
C00354  D-Fructose 1,6-bisphosphate
C00469  Ethanol
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C01159  2,3-Bisphospho-D-glycerate
C01172  beta-D-Glucose 6-phosphate
C01451  Salicin
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C06186  Arbutin
C06187  Arbutin 6-phosphate
C06188  Salicin 6-phosphate
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
srai00020  Citrate cycle (TCA cycle)
srai00030  Pentose phosphate pathway
srai00500  Starch and sucrose metabolism
srai00620  Pyruvate metabolism
srai00640  Propanoate metabolism
srai00710  Carbon fixation by Calvin cycle
KO pathway
ko00010   

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