KEGG   PATHWAY: stri02010
Entry
stri02010                   Pathway                                
Name
ABC transporters - Peterkaempfera bronchialis
Description
The ATP-binding cassette (ABC) transporters form one of the largest known protein families, and are widespread in bacteria, archaea, and eukaryotes. They couple ATP hydrolysis to active transport of a wide variety of substrates such as ions, sugars, lipids, sterols, peptides, proteins, and drugs. The structure of a prokaryotic ABC transporter usually consists of three components; typically two integral membrane proteins each having six transmembrane segments, two peripheral proteins that bind and hydrolyze ATP, and a periplasmic (or lipoprotein) substrate-binding protein. Many of the genes for the three components form operons as in fact observed in many bacterial and archaeal genomes. On the other hand, in a typical eukaryotic ABC transporter, the membrane spanning protein and the ATP-binding protein are fused, forming a multi-domain protein with the membrane-spanning domain (MSD) and the nucleotide-binding domain (NBD).
Class
Environmental Information Processing; Membrane transport
Pathway map
stri02010  ABC transporters
stri02010

Other DBs
GO: 0043190 0043191 0043192
TC: 3.A.1
Organism
Peterkaempfera bronchialis [GN:stri]
Gene
C7M71_000925  ABC transporter substrate-binding protein [KO:K15553]
C7M71_000940  sulfonate ABC transporter substrate-binding protein [KO:K15553]
C7M71_005620  aliphatic sulfonate ABC transporter substrate-binding protein [KO:K15553]
C7M71_000930  ABC transporter permease [KO:K15554]
C7M71_005630  ABC transporter permease [KO:K15554]
C7M71_000935  ABC transporter ATP-binding protein [KO:K15555] [EC:7.6.2.14]
C7M71_005625  ABC transporter ATP-binding protein [KO:K15555] [EC:7.6.2.14]
C7M71_027025  modA; molybdate ABC transporter substrate-binding protein [KO:K02020]
C7M71_027020  modB; molybdate ABC transporter permease subunit [KO:K02018]
C7M71_027015  ABC transporter ATP-binding protein [KO:K02017] [EC:7.3.2.5]
C7M71_021755  spermidine/putrescine ABC transporter substrate-binding protein [KO:K11069]
C7M71_021770  spermidine/putrescine ABC transporter substrate-binding protein [KO:K11069]
C7M71_012830  spermidine/putrescine ABC transporter substrate-binding protein [KO:K11069]
C7M71_022580  spermidine/putrescine ABC transporter substrate-binding protein [KO:K11069]
C7M71_021785  ABC transporter permease [KO:K11070]
C7M71_022590  ABC transporter permease [KO:K11070]
C7M71_012825  ABC transporter permease [KO:K11070]
C7M71_021780  ABC transporter permease [KO:K11071]
C7M71_012820  ABC transporter permease [KO:K11071]
C7M71_022585  ABC transporter permease [KO:K11071]
C7M71_021775  ABC transporter ATP-binding protein [KO:K11072] [EC:7.6.2.11]
C7M71_012835  ABC transporter ATP-binding protein [KO:K11072] [EC:7.6.2.11]
C7M71_022575  ABC transporter ATP-binding protein [KO:K11072] [EC:7.6.2.11]
C7M71_027840  ABC transporter permease subunit [KO:K02001 K02002]
C7M71_027835  ATP-binding cassette domain-containing protein [KO:K02000] [EC:7.6.2.9]
C7M71_028585  glycine/betaine ABC transporter substrate-binding protein [KO:K05845]
C7M71_028575  ABC transporter permease subunit [KO:K05846]
C7M71_028580  ABC transporter permease [KO:K05846]
C7M71_028570  ABC transporter ATP-binding protein [KO:K05847] [EC:7.6.2.9]
C7M71_013195  sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC [KO:K10112] [EC:7.5.2.-]
C7M71_003805  extracellular solute-binding protein [KO:K15770]
C7M71_003800  sugar ABC transporter permease [KO:K15771]
C7M71_003795  carbohydrate ABC transporter permease [KO:K15772]
C7M71_025105  extracellular solute-binding protein [KO:K10117]
C7M71_025100  sugar ABC transporter permease [KO:K10118]
C7M71_025095  carbohydrate ABC transporter permease [KO:K10119]
C7M71_023050  sugar ABC transporter substrate-binding protein [KO:K10227]
C7M71_023055  sugar ABC transporter permease [KO:K10228]
C7M71_023060  carbohydrate ABC transporter permease [KO:K10229]
C7M71_010395  extracellular solute-binding protein [KO:K10232]
C7M71_010400  sugar ABC transporter permease [KO:K10233]
C7M71_010405  carbohydrate ABC transporter permease [KO:K10234]
C7M71_027285  extracellular solute-binding protein [KO:K17318]
C7M71_027290  sugar ABC transporter permease [KO:K17319]
C7M71_027295  carbohydrate ABC transporter permease [KO:K17320]
C7M71_026280  extracellular solute-binding protein [KO:K10236]
C7M71_023180  ngcE; carbohydrate ABC transporter, N-acetylglucosamine/diacetylchitobiose-binding protein [KO:K10200]
C7M71_023185  sugar ABC transporter permease [KO:K10201]
C7M71_023190  carbohydrate ABC transporter permease [KO:K10202]
C7M71_009660  extracellular solute-binding protein [KO:K10240]
C7M71_009665  sugar ABC transporter permease [KO:K10241]
C7M71_009670  carbohydrate ABC transporter permease [KO:K10242]
C7M71_020190  extracellular solute-binding protein [KO:K17329]
C7M71_020195  sugar ABC transporter permease [KO:K17330]
C7M71_020200  carbohydrate ABC transporter permease [KO:K17331]
C7M71_009160  extracellular solute-binding protein [KO:K17326]
C7M71_025670  extracellular solute-binding protein [KO:K17326]
C7M71_009165  sugar ABC transporter permease [KO:K17327]
C7M71_009170  carbohydrate ABC transporter permease [KO:K17328]
C7M71_011170  BMP family ABC transporter substrate-binding protein [KO:K07335]
C7M71_011160  ABC transporter permease [KO:K23535]
C7M71_011155  ABC transporter permease [KO:K23536]
C7M71_011165  ABC transporter ATP-binding protein [KO:K23537]
C7M71_018055  carbohydrate ABC transporter substrate-binding protein [KO:K17315]
C7M71_001040  sugar ABC transporter substrate-binding protein [KO:K10439]
C7M71_007955  LacI family transcriptional regulator [KO:K10439]
C7M71_001025  ABC transporter permease [KO:K10440]
C7M71_001030  ABC transporter permease [KO:K10440]
C7M71_007950  ABC transporter permease [KO:K10440]
C7M71_027125  ABC transporter permease [KO:K10440]
C7M71_001035  sugar ABC transporter ATP-binding protein [KO:K10441] [EC:7.5.2.7]
C7M71_027120  sugar ABC transporter ATP-binding protein [KO:K10441] [EC:7.5.2.7]
C7M71_007965  D-ribose pyranase [KO:K06726] [EC:5.4.99.62]
C7M71_029020  LacI family transcriptional regulator [KO:K23508]
C7M71_029010  ABC transporter permease [KO:K23509]
C7M71_029005  ABC transporter permease [KO:K23509]
C7M71_029015  sugar ABC transporter ATP-binding protein [KO:K10820] [EC:7.5.2.9]
C7M71_023205  sugar ABC transporter substrate-binding protein [KO:K10543]
C7M71_007705  sugar ABC transporter substrate-binding protein [KO:K10543]
C7M71_023215  sugar ABC transporter permease [KO:K10544]
C7M71_007715  ABC transporter permease [KO:K10544]
C7M71_023210  sugar ABC transporter ATP-binding protein [KO:K10545] [EC:7.5.2.10]
C7M71_007710  sugar ABC transporter ATP-binding protein [KO:K10545] [EC:7.5.2.10]
C7M71_013545  pstS; phosphate ABC transporter substrate-binding protein PstS [KO:K02040]
C7M71_001085  pstC; phosphate ABC transporter permease subunit PstC [KO:K02037]
C7M71_013550  pstC; phosphate ABC transporter permease subunit PstC [KO:K02037]
C7M71_001080  phosphate ABC transporter permease PstA [KO:K02038]
C7M71_013555  phosphate ABC transporter permease PstA [KO:K02038]
C7M71_001055  pstB; phosphate ABC transporter ATP-binding protein [KO:K02036] [EC:7.3.2.1]
C7M71_013560  phosphate ABC transporter ATP-binding protein [KO:K02036] [EC:7.3.2.1]
C7M71_022315  glutamate ABC transporter substrate-binding protein [KO:K10005]
C7M71_022310  amino acid ABC transporter permease [KO:K10006]
C7M71_022305  amino acid ABC transporter permease [KO:K10007]
C7M71_022320  amino acid ABC transporter ATP-binding protein [KO:K10008] [EC:7.4.2.1]
C7M71_009945  amino acid ABC transporter substrate-binding protein [KO:K01999]
C7M71_005750  branched-chain amino acid ABC transporter substrate-binding protein [KO:K01999]
C7M71_027555  hypothetical protein [KO:K01999]
C7M71_027515  amino acid ABC transporter substrate-binding protein [KO:K01999]
C7M71_001245  hypothetical protein [KO:K01999]
C7M71_012480  hypothetical protein [KO:K01999]
C7M71_009930  branched-chain amino acid ABC transporter permease [KO:K01997]
C7M71_005755  branched-chain amino acid ABC transporter permease [KO:K01997]
C7M71_002585  branched-chain amino acid ABC transporter permease [KO:K01997]
C7M71_027530  branched-chain amino acid ABC transporter permease [KO:K01997]
C7M71_001240  hypothetical protein [KO:K01997 K01998]
C7M71_005760  branched-chain amino acid ABC transporter permease [KO:K01998]
C7M71_009925  branched-chain amino acid ABC transporter permease [KO:K01998]
C7M71_002590  branched-chain amino acid ABC transporter permease [KO:K01998]
C7M71_027535  branched-chain amino acid ABC transporter permease [KO:K01998]
C7M71_009940  ABC transporter ATP-binding protein [KO:K01995]
C7M71_005765  ABC transporter ATP-binding protein [KO:K01995]
C7M71_001235  ATP-binding cassette domain-containing protein [KO:K01995]
C7M71_002580  ABC transporter ATP-binding protein [KO:K01995]
C7M71_027520  ABC transporter ATP-binding protein [KO:K01995]
C7M71_001230  ABC transporter ATP-binding protein [KO:K01996]
C7M71_005770  ABC transporter ATP-binding protein [KO:K01996]
C7M71_009935  ABC transporter ATP-binding protein [KO:K01996]
C7M71_002575  ABC transporter ATP-binding protein [KO:K01996]
C7M71_027525  ABC transporter ATP-binding protein [KO:K01996]
C7M71_028040  ABC transporter substrate-binding protein [KO:K02073]
C7M71_028035  ABC transporter permease [KO:K02072]
C7M71_028030  ATP-binding cassette domain-containing protein [KO:K02071]
C7M71_019470  ABC transporter substrate-binding protein [KO:K15580]
C7M71_019495  ABC transporter substrate-binding protein [KO:K15580]
C7M71_026955  ABC transporter substrate-binding protein [KO:K15580]
C7M71_019475  ABC transporter permease [KO:K15581]
C7M71_019500  ABC transporter permease [KO:K15581]
C7M71_026960  ABC transporter permease [KO:K15581]
C7M71_019480  ABC transporter permease [KO:K15582]
C7M71_019505  ABC transporter permease [KO:K15582]
C7M71_026965  ABC transporter permease [KO:K15582]
C7M71_019485  ABC transporter ATP-binding protein [KO:K15583]
C7M71_019510  ABC transporter ATP-binding protein [KO:K15583]
C7M71_019490  dipeptide ABC transporter ATP-binding protein [KO:K10823]
C7M71_019515  dipeptide ABC transporter ATP-binding protein [KO:K10823]
C7M71_008000  ABC transporter substrate-binding protein [KO:K25287]
C7M71_025675  ABC transporter substrate-binding protein [KO:K25287]
C7M71_027095  iron-siderophore ABC transporter substrate-binding protein [KO:K25286]
C7M71_025135  iron-siderophore ABC transporter substrate-binding protein [KO:K25286]
C7M71_025990  ABC transporter substrate-binding protein [KO:K25286]
C7M71_007995  iron ABC transporter permease [KO:K23186]
C7M71_012780  iron ABC transporter permease [KO:K23186]
C7M71_025120  iron ABC transporter permease [KO:K23186]
C7M71_025985  iron ABC transporter permease [KO:K23186]
C7M71_007990  hypothetical protein [KO:K23187]
C7M71_012785  iron ABC transporter permease [KO:K23187]
C7M71_025125  iron ABC transporter permease [KO:K23187]
C7M71_025980  iron ABC transporter permease [KO:K23187]
C7M71_012790  ABC transporter ATP-binding protein [KO:K23188] [EC:7.2.2.17 7.2.2.-]
C7M71_025130  ABC transporter ATP-binding protein [KO:K23188] [EC:7.2.2.17 7.2.2.-]
C7M71_025975  ABC transporter ATP-binding protein [KO:K23188] [EC:7.2.2.17 7.2.2.-]
C7M71_026075  ABC transporter ATP-binding protein [KO:K23188] [EC:7.2.2.17 7.2.2.-]
C7M71_000785  ABC transporter substrate-binding protein [KO:K09815]
C7M71_008580  zinc ABC transporter substrate-binding protein [KO:K09815]
C7M71_000790  metal ABC transporter permease [KO:K09816]
C7M71_008590  metal ABC transporter permease [KO:K09816]
C7M71_008585  metal ABC transporter ATP-binding protein [KO:K09817] [EC:7.2.2.20]
C7M71_000795  ATP-binding cassette domain-containing protein [KO:K09817] [EC:7.2.2.20]
C7M71_009080  biotin transporter BioY [KO:K03523]
C7M71_029270  energy-coupling factor transporter transmembrane protein EcfT [KO:K16785]
C7M71_003435  ABC transporter permease [KO:K09690]
C7M71_003430  ABC transporter ATP-binding protein [KO:K09691] [EC:7.5.2.14]
C7M71_004170  ABC transporter permease [KO:K09692]
C7M71_012350  ABC transporter permease [KO:K09692]
C7M71_022125  ABC transporter permease [KO:K09692]
C7M71_004165  ABC transporter ATP-binding protein [KO:K09693] [EC:7.5.2.4]
C7M71_016040  ABC transporter permease [KO:K09813]
C7M71_016035  ABC transporter ATP-binding protein [KO:K09814] [EC:7.6.2.-]
C7M71_013690  ABC transporter permease [KO:K18233]
C7M71_007040  ABC transporter permease [KO:K18233]
C7M71_013695  ATP-binding cassette domain-containing protein [KO:K18232]
C7M71_007035  ATP-binding cassette domain-containing protein [KO:K18232]
C7M71_010360  ABC transporter permease [KO:K09811]
C7M71_010365  ftsE; cell division ATP-binding protein FtsE [KO:K09812]
C7M71_008710  ABC transporter ATP-binding protein [KO:K18887]
C7M71_008715  ABC transporter ATP-binding protein [KO:K18888]
Compound
C00009  Orthophosphate
C00025  L-Glutamate
C00031  D-Glucose
C00032  Heme
C00034  Manganese
C00037  Glycine
C00038  Zinc cation
C00041  L-Alanine
C00047  L-Lysine
C00049  L-Aspartate
C00051  Glutathione
C00059  Sulfate
C00062  L-Arginine
C00064  L-Glutamine
C00065  L-Serine
C00070  Copper
C00077  L-Ornithine
C00079  L-Phenylalanine
C00086  Urea
C00088  Nitrite
C00089  Sucrose
C00093  sn-Glycerol 3-phosphate
C00095  D-Fructose
C00098  Oligopeptide
C00107  Dipeptide
C00114  Choline
C00116  Glycerol
C00120  Biotin
C00121  D-Ribose
C00123  L-Leucine
C00134  Putrescine
C00135  L-Histidine
C00137  myo-Inositol
C00140  N-Acetyl-D-glucosamine
C00148  L-Proline
C00151  L-Amino acid
C00159  D-Mannose
C00175  Cobalt ion
C00181  D-Xylose
C00183  L-Valine
C00185  Cellobiose
C00188  L-Threonine
C00208  Maltose
C00212  Adenosine
C00243  Lactose
C00244  Nitrate
C00245  Taurine
C00255  Riboflavin
C00259  L-Arabinose
C00288  HCO3-
C00291  Nickel
C00294  Inosine
C00299  Uridine
C00315  Spermidine
C00320  Thiosulfate
C00330  Deoxyguanosine
C00333  D-Galacturonate
C00338  Lipopolysaccharide
C00378  Thiamine
C00379  Xylitol
C00387  Guanosine
C00392  Mannitol
C00407  L-Isoleucine
C00430  5-Aminolevulinate
C00470  Pectate
C00475  Cytidine
C00487  Carnitine
C00491  L-Cystine
C00492  Raffinose
C00503  Erythritol
C00526  Deoxyuridine
C00559  Deoxyadenosine
C00719  Betaine
C00794  D-Sorbitol
C00855  D-Methionine
C00865  Phospholipid
C00881  Deoxycytidine
C00919  Choline sulfate
C00973  Cyclomaltodextrin
C01083  alpha,alpha-Trehalose
C01153  Orthophosphoric monoester
C01157  Hydroxyproline
C01177  Inositol 1-phosphate
C01181  4-Trimethylammoniobutanoate
C01279  4-Amino-5-hydroxymethyl-2-methylpyrimidine
C01330  Sodium cation
C01417  Cyanate
C01487  D-Allose
C01606  Phthalate
C01630  Xylobiose
C01667  Bacitracin
C01674  Chitobiose
C01682  Nopaline
C01684  D-Rhamnose
C01762  Xanthosine
C01834  Lipoprotein
C01835  Maltotriose
C01935  Maltodextrin
C01946  Oleandomycin
C02160  Isomaltotriose
C02273  Digalacturonate
C03557  2-Aminoethylphosphonate
C03611  Galactose oligosaccharide
C03619  Methyl beta-D-galactoside
C04114  (E)-4-(Trimethylammonio)but-2-enoate
C04137  Octopine
C05349  Ciprofloxacin
C05402  Melibiose
C05512  Deoxyinosine
C05776  Vitamin B12
C06227  Fe(III)hydroxamate
C06229  Fe(III)dicitrate
C06230  Fe-enterobactin
C06232  Molybdate
C06687  Norfloxacin
C06705  Capsular polysaccharide
C06706  Lipo-oligosaccharide
C06707  Teichoic acid
C06767  Hemine
C07662  Sparfloxacin
C07663  Moxifloxacin
C11612  Polymyxin B
C13768  Colistin sulfate
C14818  Fe2+
C14819  Fe3+
C15521  Alkanesulfonate
C15719  Coelichelin
C16421  AI-2
C16692  Mannopine
C19609  Nickel(2+)
C19872  N-Formyl-4-amino-5-aminomethyl-2-methylpyrimidine
C20570  alpha-1,5-L-Arabinobiose
C20571  alpha-1,5-L-Arabinotriose
C20572  alpha-1,5-L-Arabinotetraose
C20573  Aldotetraouronic acid
C20679  Tungstate
C21066  D-Galactofuranose
C22040  S-Methyl-L-cysteine
G00457  Maltotetraose
Reference
PMID:9799792
  Authors
Tomii K, Kanehisa M.
  Title
A comparative analysis of ABC transporters in complete microbial genomes.
  Journal
Genome Res 8:1048-59 (1998)
DOI:10.1101/gr.8.10.1048
Reference
  Authors
Sperandeo P, Lau FK, Carpentieri A, De Castro C, Molinaro A, Deho G, Silhavy TJ, Polissi A
  Title
Functional analysis of the protein machinery required for transport of lipopolysaccharide to the outer membrane of Escherichia coli.
  Journal
J Bacteriol 190:4460-9 (2008)
DOI:10.1128/JB.00270-08
Reference
  Authors
Ruiz N, Gronenberg LS, Kahne D, Silhavy TJ
  Title
Identification of two inner-membrane proteins required for the transport of lipopolysaccharide to the outer membrane of Escherichia coli.
  Journal
Proc Natl Acad Sci U S A 105:5537-42 (2008)
DOI:10.1073/pnas.0801196105
Reference
  Authors
Omata T, Price GD, Badger MR, Okamura M, Gohta S, Ogawa T
  Title
Identification of an ATP-binding cassette transporter involved in bicarbonate uptake in the cyanobacterium Synechococcus sp. strain PCC 7942.
  Journal
Proc Natl Acad Sci U S A 96:13571-6 (1999)
DOI:10.1073/pnas.96.23.13571
Reference
  Authors
Quintero MJ, Montesinos ML, Herrero A, Flores E
  Title
Identification of genes encoding amino acid permeases by inactivation of selected ORFs from the Synechocystis genomic sequence.
  Journal
Genome Res 11:2034-40 (2001)
DOI:10.1101/gr.196301
Reference
  Authors
Picossi S, Montesinos ML, Pernil R, Lichtle C, Herrero A, Flores E
  Title
ABC-type neutral amino acid permease N-I is required for optimal diazotrophic growth and is repressed in the heterocysts of Anabaena sp. strain PCC 7120.
  Journal
Mol Microbiol 57:1582-92 (2005)
DOI:10.1111/j.1365-2958.2005.04791.x
Reference
  Authors
Valladares A, Montesinos ML, Herrero A, Flores E.
  Title
An ABC-type, high-affinity urea permease identified in cyanobacteria.
  Journal
Mol Microbiol 43:703-15 (2002)
DOI:10.1046/j.1365-2958.2002.02778.x
Reference
  Authors
Richard-Fogal CL, Frawley ER, Kranz RG
  Title
Topology and function of CcmD in cytochrome c maturation.
  Journal
J Bacteriol 190:3489-93 (2008)
DOI:10.1128/JB.00146-08
Reference
  Authors
Suzuki H, Koyanagi T, Izuka S, Onishi A, Kumagai H
  Title
The yliA, -B, -C, and -D genes of Escherichia coli K-12 encode a novel glutathione importer with an ATP-binding cassette.
  Journal
J Bacteriol 187:5861-7 (2005)
DOI:10.1128/JB.187.17.5861-5867.2005
Reference
  Authors
Novikova M, Metlitskaya A, Datsenko K, Kazakov T, Kazakov A, Wanner B, Severinov K
  Title
The Escherichia coli Yej transporter is required for the uptake of translation inhibitor microcin C.
  Journal
J Bacteriol 189:8361-5 (2007)
DOI:10.1128/JB.01028-07
Reference
  Authors
Tikhonova EB, Devroy VK, Lau SY, Zgurskaya HI
  Title
Reconstitution of the Escherichia coli macrolide transporter: the periplasmic membrane fusion protein MacA stimulates the ATPase activity of MacB.
  Journal
Mol Microbiol 63:895-910 (2007)
DOI:10.1111/j.1365-2958.2006.05549.x
Reference
  Authors
Yamanaka H, Kobayashi H, Takahashi E, Okamoto K
  Title
MacAB is involved in the secretion of Escherichia coli heat-stable enterotoxin II.
  Journal
J Bacteriol 190:7693-8 (2008)
DOI:10.1128/JB.00853-08
KO pathway
ko02010   
LinkDB

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