KEGG   PATHWAY: taes00195
Entry
taes00195                   Pathway                                
Name
Photosynthesis - Triticum aestivum (bread wheat)
Description
Photosynthesis in green plants and specialized bacteria is the process of utilizing light energy to synthesize organic compounds from carbon dioxide and water. It consists of the light dependent part (light reaction) and the light independent part (dark reaction, carbon fixation). The light reaction takes place in thylakoid, a membrane-bound compartment inside chloroplasts and cyanobacteria. The light energy is used by photosystems I and II to generate proton motive force and reducing power (NADPH or NADH). The proton motive force is used by ATP synthase to generate ATP, essentially in the same way as the mitochondrial respiratory chain. The supplies of ATP and NAD(P)H are then used to fix carbon dioxide.
Class
Metabolism; Energy metabolism
Pathway map
taes00195  Photosynthesis
taes00195

Module
taes_M00157  F-type ATPase, prokaryotes and chloroplasts [PATH:taes00195]
taes_M00161  Photosystem II [PATH:taes00195]
taes_M00163  Photosystem I [PATH:taes00195]
Organism
Triticum aestivum (bread wheat) [GN:taes]
Gene
123188632  photosystem II protein D1-like [KO:K02703] [EC:1.10.3.9]
123049085  photosystem II protein D1-like [KO:K02703] [EC:1.10.3.9]
803183  psbA; photosystem II protein D1 [KO:K02703] [EC:1.10.3.9]
123175611  photosystem II protein D1-like [KO:K02703] [EC:1.10.3.9]
123086034  photosystem II protein D1-like isoform X1 [KO:K02703] [EC:1.10.3.9]
123176984  photosystem II protein D1-like [KO:K02703] [EC:1.10.3.9]
123178083  photosystem II protein D1-like [KO:K02703] [EC:1.10.3.9]
123178958  photosystem II protein D1-like [KO:K02703] [EC:1.10.3.9]
123157757  photosystem II protein D1-like [KO:K02703] [EC:1.10.3.9]
123181322  photosystem II protein D1 [KO:K02703] [EC:1.10.3.9]
123123282  photosystem II protein D1 [KO:K02703] [EC:1.10.3.9]
123056109  photosystem II protein D1-like [KO:K02703] [EC:1.10.3.9]
803181  psbB; photosystem II 47 kDa protein [KO:K02704]
123171099  photosystem II CP47 reaction center protein [KO:K02704]
123097283  photosystem II CP43 reaction center protein-like [KO:K02705]
803153  psbC; photosystem II 44 kDa protein [KO:K02705]
123045574  photosystem II D2 protein-like [KO:K02706] [EC:1.10.3.9]
123097282  photosystem II D2 protein [KO:K02706] [EC:1.10.3.9]
803167  psbD; photosystem II protein D2 [KO:K02706] [EC:1.10.3.9]
123051035  photosystem II D2 protein-like [KO:K02706] [EC:1.10.3.9]
123067330  photosystem II D2 protein-like [KO:K02706] [EC:1.10.3.9]
123101630  photosystem II D2 protein-like [KO:K02706] [EC:1.10.3.9]
123143574  photosystem II D2 protein-like [KO:K02706] [EC:1.10.3.9]
123056199  photosystem II D2 protein-like [KO:K02706] [EC:1.10.3.9]
123057019  photosystem II D2 protein-like [KO:K02706] [EC:1.10.3.9]
803176  psbE; photosystem II protein V [KO:K02707]
803192  psbF; photosystem II protein VI [KO:K02708]
803164  psbH; photosystem II protein H [KO:K02709]
803116  psbI; photosystem II protein I [KO:K02710]
803152  psbJ; photosystem II protein J [KO:K02711]
803206  psbK; photosystem II protein K [KO:K02712]
803189  psbL; photosystem II protein L [KO:K02713]
803142  psbM; photosystem II protein M [KO:K02714]
123045025  oxygen-evolving enhancer protein 1, chloroplastic [KO:K02716]
123188682  oxygen-evolving enhancer protein 1, chloroplastic [KO:K02716]
543291  oxygen-evolving enhancer protein 1, chloroplastic [KO:K02716]
123094128  psbP-like protein 1, chloroplastic [KO:K02717]
123044987  oxygen-evolving enhancer protein 2, chloroplastic-like [KO:K02717]
123095571  psbP-like protein 1, chloroplastic [KO:K02717]
123095760  inverted formin-2-like [KO:K02717]
543290  oxygen-evolving enhancer protein 2, chloroplastic [KO:K02717]
123099804  psbP-like protein 1, chloroplastic [KO:K02717]
123087420  psbP-like protein 1, chloroplastic [KO:K02717]
123052884  oxygen-evolving enhancer protein 2, chloroplastic-like [KO:K02717]
100049048  oxygen-evolving enhancer protein 3, chloroplastic [KO:K08901]
123095860  photosynthetic NDH subunit of lumenal location 2, chloroplastic-like [KO:K08901]
123130629  photosynthetic NDH subunit of lumenal location 2, chloroplastic-like [KO:K08901]
123045656  photosynthetic NDH subunit of lumenal location 3, chloroplastic-like [KO:K08901]
123046085  photosynthetic NDH subunit of lumenal location 3, chloroplastic-like [KO:K08901]
123189420  photosynthetic NDH subunit of lumenal location 3, chloroplastic-like [KO:K08901]
123189863  photosynthetic NDH subunit of lumenal location 3, chloroplastic-like [KO:K08901]
123134130  photosynthetic NDH subunit of lumenal location 2, chloroplastic-like isoform X1 [KO:K08901]
123117358  photosynthetic NDH subunit of lumenal location 3, chloroplastic-like [KO:K08901]
123052491  oxygen-evolving enhancer protein 3, chloroplastic-like [KO:K08901]
123053528  photosynthetic NDH subunit of lumenal location 3, chloroplastic-like [KO:K08901]
123053967  photosynthetic NDH subunit of lumenal location 3, chloroplastic-like [KO:K08901]
123141478  photosynthetic NDH subunit of lumenal location 2, chloroplastic-like [KO:K08901]
123108141  photosynthetic NDH subunit of lumenal location 3, chloroplastic-like [KO:K08901]
123125885  photosynthetic NDH subunit of lumenal location 3, chloroplastic-like [KO:K08901]
123127700  photosynthetic NDH subunit of lumenal location 3, chloroplastic-like [KO:K08901]
123137549  photosynthetic NDH subunit of lumenal location 3, chloroplastic-like [KO:K08901]
123144890  photosynthetic NDH subunit of lumenal location 3, chloroplastic-like [KO:K08901]
543448  photosystem II 10 kDa polypeptide, chloroplastic [KO:K03541]
123128767  photosystem II 10 kDa polypeptide, chloroplastic-like [KO:K03541]
123128885  photosystem II 10 kDa polypeptide, chloroplastic [KO:K03541]
123146030  photosystem II 10 kDa polypeptide, chloroplastic-like [KO:K03541]
123045000  photosystem II 10 kDa polypeptide, chloroplastic-like [KO:K03541]
123139111  photosystem II 10 kDa polypeptide, chloroplastic-like [KO:K03541]
123139414  photosystem II 10 kDa polypeptide, chloroplastic-like isoform X1 [KO:K03541]
123052872  photosystem II 10 kDa polypeptide, chloroplastic-like [KO:K03541]
123079899  photosystem II 22 kDa protein 1, chloroplastic-like [KO:K03542]
123062743  photosystem II 22 kDa protein 1, chloroplastic-like [KO:K03542]
123071564  photosystem II 22 kDa protein 1, chloroplastic-like [KO:K03542]
803143  psbT; photosystem II protein T [KO:K02718]
123095796  photosystem II reaction center W protein, chloroplastic-like [KO:K02721]
123095935  photosystem II reaction center W protein, chloroplastic-like [KO:K02721]
123061935  photosystem II reaction center W protein, chloroplastic-like [KO:K02721]
123079341  photosystem II reaction center W protein, chloroplastic-like [KO:K02721]
123061958  photosystem II reaction center W protein, chloroplastic-like [KO:K02721]
123062214  photosystem II reaction center W protein, chloroplastic-like [KO:K02721]
123079998  photosystem II reaction center W protein, chloroplastic-like [KO:K02721]
123171117  photosystem II reaction center W protein, chloroplastic-like [KO:K02721]
123172465  photosystem II reaction center W protein, chloroplastic-like [KO:K02721]
123172483  photosystem II reaction center W protein, chloroplastic-like [KO:K02721]
123172490  photosystem II reaction center W protein, chloroplastic-like [KO:K02721]
123172501  photosystem II reaction center W protein, chloroplastic-like [KO:K02721]
123172639  photosystem II reaction center W protein, chloroplastic-like [KO:K02721]
123172667  photosystem II reaction center W protein, chloroplastic-like [KO:K02721]
123070959  photosystem II reaction center W protein, chloroplastic-like [KO:K02721]
123165132  photosystem II core complex proteins psbY, chloroplastic-like [KO:K02723]
123147504  photosystem II core complex proteins psbY, chloroplastic-like [KO:K02723]
123157070  photosystem II core complex proteins psbY, chloroplastic-like [KO:K02723]
803093  psbZ; photosystem II protein Z [KO:K02724]
123097555  photosystem II repair protein PSB27-H1, chloroplastic-like [KO:K08902]
123085784  photosystem II repair protein PSB27-H1, chloroplastic-like [KO:K08902]
123092220  photosystem II repair protein PSB27-H1, chloroplastic-like [KO:K08902]
123062562  photosystem II reaction center PSB28 protein, chloroplastic-like [KO:K08903]
123079721  photosystem II reaction center PSB28 protein, chloroplastic-like [KO:K08903]
123114179  photosystem II reaction center PSB28 protein, chloroplastic-like isoform X1 [KO:K08903]
123087755  photosystem II reaction center PSB28 protein, chloroplastic-like [KO:K08903]
123123666  photosystem II reaction center PSB28 protein, chloroplastic-like [KO:K08903]
123071383  photosystem II reaction center PSB28 protein, chloroplastic-like [KO:K08903]
803163  psaA; photosystem I P700 chlorophyll a apoprotein A1 [KO:K02689] [EC:1.97.1.12]
123060531  photosystem I P700 chlorophyll a apoprotein A2 [KO:K02690] [EC:1.97.1.12]
123046756  photosystem I P700 chlorophyll a apoprotein A2-like [KO:K02690] [EC:1.97.1.12]
803182  psaB; photosystem I P700 chlorophyll a apoprotein A2 [KO:K02690] [EC:1.97.1.12]
123170843  photosystem I P700 chlorophyll a apoprotein A2-like [KO:K02690] [EC:1.97.1.12]
123067404  photosystem I P700 chlorophyll a apoprotein A2-like [KO:K02690] [EC:1.97.1.12]
123121552  photosystem I P700 chlorophyll a apoprotein A2-like [KO:K02690] [EC:1.97.1.12]
123144604  photosystem I P700 chlorophyll a apoprotein A2-like [KO:K02690] [EC:1.97.1.12]
803185  psaC; photosystem I subunit VII [KO:K02691] [EC:1.97.1.12]
123113846  photosystem I reaction center subunit II, chloroplastic-like [KO:K02692]
123105535  photosystem I reaction center subunit II, chloroplastic [KO:K02692]
123123353  photosystem I reaction center subunit II, chloroplastic-like [KO:K02692]
123114022  photosystem I reaction center subunit IV, chloroplastic-like [KO:K02693]
123123511  photosystem I reaction center subunit IV, chloroplastic-like [KO:K02693]
123105692  photosystem I reaction center subunit IV, chloroplastic [KO:K02693]
123113505  photosystem I reaction center subunit III, chloroplastic-like [KO:K02694]
123123037  photosystem I reaction center subunit III, chloroplastic [KO:K02694]
123105238  photosystem I reaction center subunit III, chloroplastic-like [KO:K02694]
123112335  photosystem I reaction center subunit V, chloroplastic [KO:K08905]
123104110  photosystem I reaction center subunit V, chloroplastic-like [KO:K08905]
123121866  photosystem I reaction center subunit V, chloroplastic-like [KO:K08905]
123145507  photosystem I reaction center subunit VI, chloroplastic [KO:K02695]
123067985  photosystem I reaction center subunit VI, chloroplastic-like [KO:K02695]
123183068  photosystem I reaction center subunit VI, chloroplastic-like [KO:K02695]
803175  psaI; photosystem I subunit VIII [KO:K02696]
803186  psaJ; photosystem I subunit IX [KO:K02697]
123045005  photosystem I reaction center subunit psaK, chloroplastic-like [KO:K02698]
123188752  photosystem I reaction center subunit psaK, chloroplastic-like [KO:K02698]
123052864  photosystem I reaction center subunit psaK, chloroplastic [KO:K02698]
123076982  photosystem I reaction center subunit XI, chloroplastic-like [KO:K02699]
123060002  photosystem I reaction center subunit XI, chloroplastic-like [KO:K02699]
123067251  photosystem I reaction center subunit XI, chloroplastic-like [KO:K02699]
123068464  photosystem I reaction center subunit XI, chloroplastic [KO:K02699]
123043755  photosystem I reaction center subunit N, chloroplastic-like [KO:K02701]
123187550  photosystem I reaction center subunit N, chloroplastic [KO:K02701]
123051617  photosystem I reaction center subunit N, chloroplastic [KO:K02701]
100037656  photosystem I subunit O [KO:K14332]
123189165  photosystem I subunit O-like [KO:K14332]
123053251  photosystem I subunit O-like [KO:K14332]
803113  petA; cytochrome f [KO:K02634]
803106  petB; cytochrome b6 [KO:K02635]
123044564  cytochrome b6-f complex iron-sulfur subunit, chloroplastic-like [KO:K02636] [EC:7.1.1.6]
123188289  cytochrome b6-f complex iron-sulfur subunit, chloroplastic-like [KO:K02636] [EC:7.1.1.6]
123171554  cytochrome b6-f complex iron-sulfur subunit, chloroplastic-like [KO:K02636] [EC:7.1.1.6]
543078  cytochrome b6-f complex iron-sulfur subunit, chloroplastic [KO:K02636] [EC:7.1.1.6]
803109  petD; cytochrome b6/f complex subunit IV [KO:K02637]
803161  petG; cytochrome b6/f complex subunit V [KO:K02640]
803086  petN; cytochrome b6/f complex subunit VIII [KO:K03689]
123165221  plastocyanin, chloroplastic-like [KO:K02638]
123150017  plastocyanin, chloroplastic-like [KO:K02638]
123088670  plastocyanin, chloroplastic [KO:K02638]
123165394  ferredoxin, chloroplastic-like [KO:K02639]
123045401  ferredoxin-1-like [KO:K02639]
123095623  ferredoxin C 1, chloroplastic-like [KO:K02639]
123147660  ferredoxin, chloroplastic [KO:K02639]
123147661  ferredoxin, chloroplastic-like [KO:K02639]
123167638  ferredoxin-like [KO:K02639]
123189150  ferredoxin-1-like [KO:K02639]
123079837  ferredoxin, root R-B1-like [KO:K02639]
123114173  ferredoxin-3, chloroplastic-like [KO:K02639]
123114182  ferredoxin, root R-B1-like [KO:K02639]
123082754  ferredoxin, root R-B1-like [KO:K02639]
123065974  ferredoxin, root R-B1-like [KO:K02639]
123172062  ferredoxin C 2, chloroplastic-like [KO:K02639]
123156955  ferredoxin, chloroplastic [KO:K02639]
123087269  ferredoxin C 2, chloroplastic-like [KO:K02639]
123087348  ferredoxin C 1, chloroplastic-like [KO:K02639]
123053237  ferredoxin-1-like [KO:K02639]
123087761  ferredoxin-3, chloroplastic-like [KO:K02639]
123123662  ferredoxin-3, chloroplastic-like [KO:K02639]
123159751  ferredoxin-like [KO:K02639]
123182177  ferredoxin-6, chloroplastic-like [KO:K02639]
123090583  ferredoxin C 1, chloroplastic-like [KO:K02639]
123090692  ferredoxin C 2, chloroplastic-like [KO:K02639]
123057926  ferredoxin-6, chloroplastic-like [KO:K02639]
123148043  ferredoxin--NADP reductase, leaf isozyme 1, chloroplastic-like [KO:K02641] [EC:1.18.1.2]
123188755  ferredoxin--NADP reductase, embryo isozyme, chloroplastic-like [KO:K02641] [EC:1.18.1.2]
123113569  ferredoxin--NADP reductase, root isozyme, chloroplastic-like [KO:K02641] [EC:1.18.1.2]
123131585  ferredoxin--NADP reductase, leaf isozyme 2, chloroplastic-like [KO:K02641] [EC:1.18.1.2]
123135392  ferredoxin--NADP reductase, leaf isozyme 2, chloroplastic-like [KO:K02641] [EC:1.18.1.2]
123052867  ferredoxin--NADP reductase, embryo isozyme, chloroplastic [KO:K02641] [EC:1.18.1.2]
123088498  ferredoxin--NADP reductase, leaf isozyme 1, chloroplastic-like [KO:K02641] [EC:1.18.1.2]
123123096  ferredoxin--NADP reductase, root isozyme, chloroplastic-like [KO:K02641] [EC:1.18.1.2]
123105301  ferredoxin--NADP reductase, root isozyme, chloroplastic [KO:K02641] [EC:1.18.1.2]
123142939  ferredoxin--NADP reductase, leaf isozyme 2, chloroplastic-like [KO:K02641] [EC:1.18.1.2]
123164362  ferredoxin--NADP reductase, leaf isozyme 1, chloroplastic-like [KO:K02641] [EC:1.18.1.2]
123044516  cytochrome c6, chloroplastic-like [KO:K08906]
123188218  cytochrome c6, chloroplastic-like [KO:K08906]
123049126  cytochrome c6, chloroplastic-like [KO:K08906]
803096  atpE; ATP synthase CF1 epsilon subunit [KO:K02114]
123045578  ATP synthase subunit beta, chloroplastic [KO:K02112] [EC:7.1.2.2 7.2.2.1]
803128  atpB; ATP synthase CF1 beta subunit [KO:K02112] [EC:7.1.2.2 7.2.2.1]
123180887  ATP synthase subunit beta, chloroplastic-like [KO:K02112] [EC:7.1.2.2 7.2.2.1]
123053158  ATP synthase subunit beta, chloroplastic [KO:K02112] [EC:7.1.2.2 7.2.2.1]
123123052  ATP synthase subunit beta, chloroplastic-like [KO:K02112] [EC:7.1.2.2 7.2.2.1]
123055350  ATP synthase subunit beta, chloroplastic-like [KO:K02112] [EC:7.1.2.2 7.2.2.1]
123056111  ATP synthase subunit beta, chloroplastic-like [KO:K02112] [EC:7.1.2.2 7.2.2.1]
123044694  ATP synthase subunit gamma, chloroplastic [KO:K02115]
100359391  ATP synthase subunit gamma, chloroplastic [KO:K02115]
123052557  ATP synthase subunit gamma, chloroplastic-like [KO:K02115]
123060533  ATP synthase subunit alpha, chloroplastic-like [KO:K02111] [EC:7.1.2.2 7.2.2.1]
123096864  ATP synthase subunit alpha, chloroplastic-like [KO:K02111] [EC:7.1.2.2 7.2.2.1]
123046757  ATP synthase subunit alpha, chloroplastic-like [KO:K02111] [EC:7.1.2.2 7.2.2.1]
803205  atpA; ATP synthase CF1 alpha subunit [KO:K02111] [EC:7.1.2.2 7.2.2.1]
123067393  ATP synthase subunit alpha, chloroplastic-like [KO:K02111] [EC:7.1.2.2 7.2.2.1]
123120528  ATP synthase subunit alpha, chloroplastic-like [KO:K02111] [EC:7.1.2.2 7.2.2.1]
123104770  ATP synthase subunit alpha, chloroplastic [KO:K02111] [EC:7.1.2.2 7.2.2.1]
123181327  ATP synthase subunit alpha, chloroplastic-like [KO:K02111] [EC:7.1.2.2 7.2.2.1]
123123286  ATP synthase subunit alpha, chloroplastic-like [KO:K02111] [EC:7.1.2.2 7.2.2.1]
123057018  ATP synthase subunit alpha, chloroplastic-like [KO:K02111] [EC:7.1.2.2 7.2.2.1]
123110391  ATP synthase subunit alpha, chloroplastic-like [KO:K02111] [EC:7.1.2.2 7.2.2.1]
123128356  ATP synthase delta chain, chloroplastic-like [KO:K02113]
123145464  ATP synthase delta chain, chloroplastic-like [KO:K02113]
123138205  ATP synthase delta chain, chloroplastic-like [KO:K02113]
123097873  ATP synthase subunit b', chloroplastic-like [KO:K02109]
123099470  ATP synthase subunit b, chloroplastic [KO:K02109]
803099  atpF; ATP synthase CF0 B subunit [KO:K02109]
123085474  ATP synthase subunit b', chloroplastic-like [KO:K02109]
123092569  ATP synthase subunit b', chloroplastic-like [KO:K02109]
803095  atpH; ATP synthase CF0 C subunit [KO:K02110]
123060532  ATP synthase subunit a, chloroplastic-like [KO:K02108]
123082000  ATP synthase subunit a, chloroplastic-like [KO:K02108]
123099467  ATP synthase subunit a, chloroplastic-like [KO:K02108]
803092  atpI; ATP synthase CF0 A subunit [KO:K02108]
123067371  ATP synthase subunit a, chloroplastic-like [KO:K02108]
123068902  ATP synthase subunit a, chloroplastic-like [KO:K02108]
123121038  ATP synthase subunit a, chloroplastic-like [KO:K02108]
123121039  ATP synthase subunit a, chloroplastic-like [KO:K02108]
123178469  ATP synthase subunit a, chloroplastic [KO:K02108]
123104771  ATP synthase subunit a, chloroplastic-like [KO:K02108]
123123015  ATP synthase subunit a, chloroplastic-like [KO:K02108]
123181326  ATP synthase subunit a, chloroplastic-like [KO:K02108]
123123289  ATP synthase subunit a, chloroplastic-like [KO:K02108]
123055165  ATP synthase subunit a, chloroplastic-like [KO:K02108]
123092729  ATP synthase subunit a, chloroplastic-like [KO:K02108]
Compound
C00001  H2O
C00002  ATP
C00005  NADPH
C00006  NADP+
C00007  Oxygen
C00008  ADP
C00009  Orthophosphate
C00034  Manganese
C00080  H+
C02061  Plastoquinone
C16693  Plastoquinol
Reference
PMID:14764885
  Authors
Ferreira KN, Iverson TM, Maghlaoui K, Barber J, Iwata S.
  Title
Architecture of the photosynthetic oxygen-evolving center.
  Journal
Science 303:1831-8 (2004)
DOI:10.1126/science.1093087
Reference
PMID:12518057
  Authors
Kamiya N, Shen JR.
  Title
Crystal structure of oxygen-evolving photosystem II from Thermosynechococcus vulcanus at 3.7-A resolution.
  Journal
Proc Natl Acad Sci U S A 100:98-103 (2003)
DOI:10.1073/pnas.0135651100
Reference
PMID:11217865
  Authors
Zouni A, Witt HT, Kern J, Fromme P, Krauss N, Saenger W, Orth P.
  Title
Crystal structure of photosystem II from Synechococcus elongatus at 3.8 A resolution.
  Journal
Nature 409:739-743 (2001)
DOI:10.1038/35055589
Reference
PMID:11418848
  Authors
Jordan P, Fromme P, Witt HT, Klukas O, Saenger W, Krauss N.
  Title
Three-dimensional structure of cyanobacterial photosystem I at 2.5 A resolution.
  Journal
Nature 411:909-917 (2001)
DOI:10.1038/35082000
Reference
PMID:11369223
  Authors
Jones MR, Fyfe PK.
  Title
Photosynthesis: new light on biological oxygen production.
  Journal
Curr Biol 17:R318-R321 (2001)
DOI:10.1016/S0960-9822(01)00174-9
Reference
PMID:11914373
  Authors
Shen G, Zhao J, Reimer SK, Antonkine ML, Cai Q, Weiland SM, Golbeck JH, Bryant DA.
  Title
Assembly of photosystem I. I. Inactivation of the rubA gene encoding a membrane-associated rubredoxin in the cyanobacterium Synechococcus sp. PCC 7002 causes a loss of photosystem I activity.
  Journal
J Biol Chem 277:20343-54 (2002)
DOI:10.1074/jbc.M201103200
Related
pathway
taes00196  Photosynthesis - antenna proteins
taes00710  Carbon fixation by Calvin cycle
KO pathway
ko00195   
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