PATHWAY: tmo02010 Help
Entry
Name
ABC transporters - Tistrella mobilis
Description
The ATP-binding cassette (ABC) transporters form one of the largest known protein families, and are widespread in bacteria, archaea, and eukaryotes. They couple ATP hydrolysis to active transport of a wide variety of substrates such as ions, sugars, lipids, sterols, peptides, proteins, and drugs. The structure of a prokaryotic ABC transporter usually consists of three components; typically two integral membrane proteins each having six transmembrane segments, two peripheral proteins that bind and hydrolyze ATP, and a periplasmic (or lipoprotein) substrate-binding protein. Many of the genes for the three components form operons as in fact observed in many bacterial and archaeal genomes. On the other hand, in a typical eukaryotic ABC transporter, the membrane spanning protein and the ATP-binding protein are fused, forming a multi-domain protein with the membrane-spanning domain (MSD) and the nucleotide-binding domain (NBD).
Class
Environmental Information Processing; Membrane transport
BRITE hierarchy
Pathway map
Ortholog table
Other DBs
Organism
Tistrella mobilis [GN:
tmo ]
Gene
TMO_1563 cysP; sulfate ABC transporter, sulfate-binding protein [KO:K02048 ]
TMO_0705 sulfate ABC transporter, periplasmic sulfate-binding protein [KO:K23163 ]
TMO_1562 cysU; sulfate ABC transporter, permease protein CysT [KO:K02046 ]
TMO_1561 cysW; sulfate ABC transporter, permease protein CysW [KO:K02047 ]
TMO_0321 nrtC; putative nitrate transporter component, nrtA [KO:K15576 ]
TMO_0322 nrtB; putative nitrate transport system permease protein [KO:K15577 ]
TMO_2146 nrtB; nitrate ABC transporter, inner membrane subunit [KO:K15577 ]
TMO_2731 ssuA; sulfate ester transport system substrate-binding protein [KO:K15553 ]
TMO_2730 ssuC; sulfate ester transport system permease protein [KO:K15554 ]
TMO_2473 putative sulfonate/nitrate transport system substrate-binding protein [KO:K15598 ]
TMO_2979 modA; molybdate ABC transporter, periplasmic molybdate-binding protein [KO:K02020 ]
TMO_2980 modB; molybdate ABC transporter, permease protein [KO:K02018 ]
TMO_b0350 ABC superfamily ATP binding cassette transporter, binding protein [KO:K02012 ]
TMO_1390 potI; binding-protein-dependent transport systems inner membrane component [KO:K11070 ]
TMO_1391 potB; binding-protein-dependent transport systems inner membrane component [KO:K11071 ]
TMO_0287 potI; binding-protein dependent transport system inner membrane protein [KO:K11074 ]
TMO_0288 potH; binding-protein dependent transport system inner membrane protein [KO:K11075 ]
TMO_2953 proX; Glycine betaine-binding periplasmic protein [KO:K02002 ]
TMO_0868 glycine betaine/proline transport system substrate-binding protein [KO:K02002 ]
TMO_2952 proW; histidine transport system permease ABC transporter protein [KO:K02001 ]
TMO_0869 binding-protein-dependent transport systems inner membrane component [KO:K02001 ]
TMO_1666 osmF; Substrate-binding region of ABC-type glycine betaine transport system [KO:K05845 ]
TMO_1663 yehW; binding-protein-dependent transport systems inner membrane component [KO:K05846 ]
TMO_1665 yehY; binding-protein-dependent transport systems inner membrane component [KO:K05846 ]
TMO_b0372 ugpC; lactose transport ATP-binding protein LacK [KO:K10112 ] [EC:7.5.2.-]
TMO_c0521 binding-protein-dependent transport systems inner membrane component [KO:K10237 ]
TMO_c0522 yurM; maltose/maltodextrin ABC transporter permease protein MalG [KO:K10238 ]
TMO_a0258 chvE; putative sugar uptake ABC transporter periplasmic solute-binding protein precursor [KO:K10546 ]
TMO_a0256 xylH; inner membrane permease of D-xylose ABC transporter [KO:K10547 ]
TMO_c0739 ABC superfamily ATP binding cassette transporter substrate binding protein [KO:K02067 ]
TMO_1876 putative ribonucleotide transport ATP-binding protein [KO:K02065 ]
TMO_1195 simple sugar transport system substrate-binding protein [KO:K07335 ]
TMO_1194 putative simple sugar transport system permease protein [KO:K23535 ]
TMO_c0407 branched chain amino acid ABC transporter, permease protein [KO:K23536 ]
TMO_1191 yufO; putative ABC transporter ATP-binding protein [KO:K23537 ]
TMO_1146 methyl-galactoside transport system permease protein [KO:K10440 ]
TMO_a0248 ytfQ; periplasmic binding protein/LacI transcriptional regulator [KO:K23508 ]
TMO_b0100 yurM; binding-protein-dependent transport systems inner membrane component [KO:K17323 ]
TMO_3303 ugpB; extracellular solute-binding protein, family 1 [KO:K05813 ]
TMO_3226 ugpB; sn-glycerol-3-phosphate-binding periplasmic protein [KO:K05813 ]
TMO_3304 ugpA; SN-glycerol-3-phosphate ABC transporter, permease protein [KO:K05814 ]
TMO_1318 yurN; inner membrane component of binding-protein-dependent transport system [KO:K05814 ]
TMO_3227 ugpA; sn-glycerol-3-phosphate ABC transporter permease [KO:K05814 ]
TMO_3305 ugpE; sn-glycerol-3-phosphate ABC transporter, permease protein [KO:K05815 ]
TMO_1317 araQ; ABC superfamily ATP binding cassette transporter, membrane protein [KO:K05815 ]
TMO_3228 ugpE; sn-glycerol-3-phosphate transport system permease protein [KO:K05815 ]
TMO_b0347 pstS; phosphate ABC transporter, periplasmic phosphate-binding protein [KO:K02040 ]
TMO_3505 sphX; phosphate ABC transporter, periplasmic binding protein [KO:K02040 ]
TMO_b0346 pstC; phosphate ABC transporter, inner membrane subunit PstC [KO:K02037 ]
TMO_3506 yqgH; phosphate ABC transporter, permease protein PstC [KO:K02037 ]
TMO_3507 yqgI; phosphate ABC transporter, inner membrane subunit PstA [KO:K02038 ]
TMO_2091 phnD; binding protein component of ABC phosphonate transporter [KO:K02044 ]
TMO_2090 phnE; phosphonate ABC transporter, inner membrane subunit [KO:K02042 ]
TMO_b0466 aapJ; general L-amino acid transport system substrate-binding protein [KO:K09969 ]
TMO_2514 aapJ; general L-amino acid transport system substrate-binding protein [KO:K09969 ]
TMO_2513 yhdX; putative amino acid ABC transporter permease protein [KO:K09970 ]
TMO_2512 aapM; general L-amino acid transport system permease protein [KO:K09971 ]
TMO_3089 hisQ; polar amino acid ABC transporter, inner membrane subunit [KO:K23056 ]
TMO_3090 occM; polar amino acid transport system permease protein [KO:K23057 ]
TMO_b0090 yecS; ABC transporter, membrane spanning protein (amino acid) [KO:K23062 ]
TMO_b0091 gltK; putative amino acid ABC transporter permease protein [KO:K23063 ]
TMO_c0433 putative branched-chain amino acid ABC transporter, periplasmic substrate-binding protein [KO:K01999 ]
TMO_3066 branched-chain amino acid transport system substrate-binding protein [KO:K01999 ]
TMO_2012 branched-chain amino acid ABC transporter, periplasmic branched-chain amino acid-binding protein [KO:K01999 ]
TMO_a0164 putative branched-chain amino acid transport system substrate-binding protein [KO:K01999 ]
TMO_b0239 ABC branched chain amino acid transporter, periplasmic ligandbinding protein [KO:K01999 ]
TMO_2138 putative ABC branched-chain amino transporter, periplasmic binding protein [KO:K01999 ]
TMO_0800 putative periplasmic substrate-binding protein, ABC-type amino acid ABC transporter [KO:K01999 ]
TMO_0637 ABC transporter, periplasmic branched chain amino acid binding protein [KO:K01999 ]
TMO_3499 branched chain amino acid ABC transporter amino acid-binding protein [KO:K01999 ]
TMO_a0294 braC; branched chain amino acid ABC transporter periplasmic ligand-binding protein [KO:K01999 ]
TMO_a0399 branched-chain amino acid transport system substrate-binding protein [KO:K01999 ]
TMO_a0419 branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein [KO:K01999 ]
TMO_b0186 branched-chain amino acid ABC superfamily ATP binding cassette transporter, binding protein [KO:K01999 ]
TMO_1642 putative branched chain amino acid ABC transporter substrate-binding protein [KO:K01999 ]
TMO_a0499 livK; putative leucine/isoleucine/valine-binding protein precursor [KO:K01999 ]
TMO_c0751 livH; hydrophobic amino acid ABC transporter permease [KO:K01997 ]
TMO_2009 braD; putative amino acid or sugar ABC transport system, permease protein [KO:K01997 ]
TMO_b0238 braD; ABC branched chain amino acid transporter, inner membrane subunit [KO:K01997 ]
TMO_3092 livH; branched-chain amino acid ABC transporter (permease) [KO:K01997 ]
TMO_a0295 braD; ABC branched chain amino acid family transporter, inner membrane subunit [KO:K01997 ]
TMO_2135 branched chain amino acid ABC transporter permease [KO:K01997 ]
TMO_a0400 braD; branched-chain amino acid ABC transporter permease protein [KO:K01997 ]
TMO_b0441 braD; ABC superfamily ATP binding cassette transporter, membrane protein [KO:K01997 ]
TMO_1645 livM; branched chain amino acid ABC transporter inner membrane protein [KO:K01998 ]
TMO_2136 livM; ABC-type branched-chain amino acid transport system, permease component [KO:K01998 ]
TMO_3065 livM; branched-chain amino acid transport system permease protein [KO:K01998 ]
TMO_a0296 braE; High-affinity branched-chain amino acid transport system permease protein braE [KO:K01998 ]
TMO_2008 putative amino acid or sugar ABC transport system, permease protein [KO:K01998 ]
TMO_b0237 ABC branched chain amino acid transporter, inner membrane subunit [KO:K01998 ]
TMO_a0417 livM; putative ABC transport system, membrane protein [KO:K01998 ]
TMO_b0442 livM; ABC superfamily ATP binding cassette transporter, permease protein [KO:K01998 ]
TMO_c0431 braF; ABC superfamily ATP binding cassette transporter, ABC protein [KO:K01995 ]
TMO_3062 braF; high-affinity branched-chain amino acid transport ATP-binding protein [KO:K01995 ]
TMO_b0236 livG; ABC branched chain amino acid transporter, ATPase subunit [KO:K01995 ]
TMO_1644 braF; High-affinity branched-chain amino acid transport ATP-binding protein braF [KO:K01995 ]
TMO_3094 braF; branched-chain amino acid ABC transporter ATP-binding protein [KO:K01995 ]
TMO_a0297 braF; branched-chain amino acid ABC transporter ATPase [KO:K01995 ]
TMO_0925 braF; branched-chain amino acid ABC transporter, ATP-binding protein [KO:K01995 ]
TMO_a0416 braF; putative ABC transport system, ATP-bidning protein [KO:K01995 ]
TMO_2046 livF; branched-chain amino acid transport system ATP-binding protein [KO:K01996 ]
TMO_0924 livF; branched-chain amino acid ABC transporter, ATP-binding protein [KO:K01996 ]
TMO_2133 livF; ABC-type branched-chain amino acid transport systems, ATPase component [KO:K01996 ]
TMO_3095 livF; branched-chain amino acid ABC transporter ATP-binding protein [KO:K01996 ]
TMO_a0298 braG; High-affinity branched-chain amino acid transport ATP-binding protein braG [KO:K01996 ]
TMO_2010 livF; High-affinity branched-chain amino acid transport ATP-binding protein [KO:K01996 ]
TMO_b0235 livF; ABC branched chain amino acid transporter, ATPase subunit [KO:K01996 ]
TMO_a0415 braG; branched chain amino acid ABC transporter ATP-binding protein [KO:K01996 ]
TMO_b0444 livF; branched-chain amino acid ABC superfamily ATP binding cassette transporter, ABC protein [KO:K01996 ]
TMO_c0430 braG; putative high-affinity branched-chain amino acid transport ATP-binding proteinputative [KO:K01996 ]
TMO_3494 metQ; D-methionine ABC superfamily ATP binding cassette transporter, binding protein [KO:K02073 ]
TMO_d0017 metI; binding-protein-dependent transport systems inner membrane component [KO:K02072 ]
TMO_d0018 metN; D-methionine transport system ATP-binding protein [KO:K02071 ]
TMO_1722 amiC; ABC-type branched-chain amino acid transport system, periplasmic component [KO:K11959 ]
TMO_0499 amiC; Aliphatic amidase expression-regulating protein [KO:K11959 ]
TMO_0498 braD; putative permease component of ABC transporter [KO:K11960 ]
TMO_1723 livH; High-affinity branched-chain amino acid transport system permease protein livH [KO:K11960 ]
TMO_1724 livM; branched chain amino acid ABC transporter permease [KO:K11961 ]
TMO_0497 livM; putative branched-chain amino acid ABC transporter, permease protein [KO:K11961 ]
TMO_1725 braF; putative ATP-binding component of ABC transporter [KO:K11962 ]
TMO_0496 braF; branched chain amino acid ABC transporter ATP-binding protein [KO:K11962 ]
TMO_0495 braG; putative branched-chain amino acid ABC transporter, ATP-binding protein [KO:K11963 ]
TMO_1726 livF; ABC transporter, nucleotide binding/ATPase protein (urea/amide) [KO:K11963 ]
TMO_b0405 livF; ABC superfamily ATP binding cassette transporter, ABC protein [KO:K11963 ]
TMO_3019 dppA; dipeptide-binding ABC transporter substrate-binding component [KO:K12368 ]
TMO_3017 dppC; peptide/nickel transport system permease protein [KO:K12370 ]
TMO_3016 dppD; dipeptide ABC superfamily ATP binding cassette transporter, ABC protein [KO:K12371 ]
TMO_3188 ABC-type oligopeptide transport system, periplasmic component [KO:K13893 ]
TMO_3187 yejB; peptide/nickel transport system permease protein [KO:K13894 ]
TMO_3186 yejE; binding-protein-dependent transport systems inner membrane component [KO:K13895 ]
TMO_3185 yejF; putative ATP-binding component of ABC transporter [KO:K13896 ]
TMO_b0221 periplasmic component, ABC-type hydroxamate-dependent iron transport system [KO:K23227 ]
TMO_d0052 iron complex transport system substrate-binding protein [KO:K23227 ]
TMO_2736 yfeC; Chelated iron transport system membrane protein yfeC [KO:K11605 ]
TMO_2737 yfeD; Chelated iron transport system membrane protein yfeD [KO:K11606 ]
TMO_2936 cobalt ABC transporter, inner membrane subunit CbiQ [KO:K02008 ]
TMO_1951 lolC; lipoprotein-releasing system permease protein [KO:K09808 ]
TMO_1950 lolD; ABC transporter related protein [KO:K09810 ] [EC:7.6.2.-]
TMO_2997 lolD; ABC transporter, ATP-binding protein [KO:K09810 ] [EC:7.6.2.-]
TMO_3277 ygaD; ABC transporter ATP-binding/permease [KO:K14699 ] [EC:7.-.-.-]
TMO_2831 msbA; ABC-type multidrug transport system, ATPase and permease components [KO:K11085 ] [EC:7.5.2.6 ]
TMO_1065 paxB; putative exotoxin translocation ATP-binding protein PaxB [KO:K12541 ]
TMO_a0191 cydD; ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD [KO:K16013 ]
TMO_2360 macB; ABC transporter related protein [KO:K05685 ] [EC:7.6.2.-]
TMO_0956 macB; ABC transporter related protein [KO:K05685 ] [EC:7.6.2.-]
TMO_b0335 pyoverdine ABC export system, permease/ATP-binding protein [KO:K06160 ]
TMO_c0837 yddA; putative ABC transport system, ATP-binding protein [KO:K02471 ]
Compound
C00093 sn-Glycerol 3-phosphate
C01153 Orthophosphoric monoester
C01181 4-Trimethylammoniobutanoate
C01279 4-Amino-5-hydroxymethyl-2-methylpyrimidine
C03557 2-Aminoethylphosphonate
C03611 Galactose oligosaccharide
C03619 Methyl beta-D-galactoside
C04114 (E)-4-(Trimethylammonio)but-2-enoate
C06705 Capsular polysaccharide
C19872 N-Formyl-4-amino-5-aminomethyl-2-methylpyrimidine
C20570 alpha-1,5-L-Arabinobiose
C20571 alpha-1,5-L-Arabinotriose
C20572 alpha-1,5-L-Arabinotetraose
Reference
Authors
Tomii K, Kanehisa M.
Title
A comparative analysis of ABC transporters in complete microbial genomes.
Journal
Reference
Authors
Sperandeo P, Lau FK, Carpentieri A, De Castro C, Molinaro A, Deho G, Silhavy TJ, Polissi A
Title
Functional analysis of the protein machinery required for transport of lipopolysaccharide to the outer membrane of Escherichia coli.
Journal
Reference
Authors
Ruiz N, Gronenberg LS, Kahne D, Silhavy TJ
Title
Identification of two inner-membrane proteins required for the transport of lipopolysaccharide to the outer membrane of Escherichia coli.
Journal
Reference
Authors
Omata T, Price GD, Badger MR, Okamura M, Gohta S, Ogawa T
Title
Identification of an ATP-binding cassette transporter involved in bicarbonate uptake in the cyanobacterium Synechococcus sp. strain PCC 7942.
Journal
Reference
Authors
Quintero MJ, Montesinos ML, Herrero A, Flores E
Title
Identification of genes encoding amino acid permeases by inactivation of selected ORFs from the Synechocystis genomic sequence.
Journal
Reference
Authors
Picossi S, Montesinos ML, Pernil R, Lichtle C, Herrero A, Flores E
Title
ABC-type neutral amino acid permease N-I is required for optimal diazotrophic growth and is repressed in the heterocysts of Anabaena sp. strain PCC 7120.
Journal
Reference
Authors
Valladares A, Montesinos ML, Herrero A, Flores E.
Title
An ABC-type, high-affinity urea permease identified in cyanobacteria.
Journal
Reference
Authors
Richard-Fogal CL, Frawley ER, Kranz RG
Title
Topology and function of CcmD in cytochrome c maturation.
Journal
Reference
Authors
Suzuki H, Koyanagi T, Izuka S, Onishi A, Kumagai H
Title
The yliA, -B, -C, and -D genes of Escherichia coli K-12 encode a novel glutathione importer with an ATP-binding cassette.
Journal
Reference
Authors
Novikova M, Metlitskaya A, Datsenko K, Kazakov T, Kazakov A, Wanner B, Severinov K
Title
The Escherichia coli Yej transporter is required for the uptake of translation inhibitor microcin C.
Journal
Reference
Authors
Tikhonova EB, Devroy VK, Lau SY, Zgurskaya HI
Title
Reconstitution of the Escherichia coli macrolide transporter: the periplasmic membrane fusion protein MacA stimulates the ATPase activity of MacB.
Journal
Reference
Authors
Yamanaka H, Kobayashi H, Takahashi E, Okamoto K
Title
MacAB is involved in the secretion of Escherichia coli heat-stable enterotoxin II.
Journal
KO pathway
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