KEGG   PATHWAY: tss00195
Entry
tss00195                    Pathway                                
Name
Photosynthesis - Telopea speciosissima (New South Wales waratah)
Description
Photosynthesis in green plants and specialized bacteria is the process of utilizing light energy to synthesize organic compounds from carbon dioxide and water. It consists of the light dependent part (light reaction) and the light independent part (dark reaction, carbon fixation). The light reaction takes place in thylakoid, a membrane-bound compartment inside chloroplasts and cyanobacteria. The light energy is used by photosystems I and II to generate proton motive force and reducing power (NADPH or NADH). The proton motive force is used by ATP synthase to generate ATP, essentially in the same way as the mitochondrial respiratory chain. The supplies of ATP and NAD(P)H are then used to fix carbon dioxide.
Class
Metabolism; Energy metabolism
Pathway map
tss00195  Photosynthesis
tss00195

Organism
Telopea speciosissima (New South Wales waratah) [GN:tss]
Gene
122647054  photosystem II protein D1 [KO:K02703] [EC:1.10.3.9]
122647689  photosystem II protein D1 [KO:K02703] [EC:1.10.3.9]
122647529  photosystem II CP47 reaction center protein [KO:K02704]
122647684  LOW QUALITY PROTEIN: photosystem II CP47 reaction center protein-like [KO:K02704]
122647960  photosystem II CP47 reaction center protein-like [KO:K02704]
122647680  LOW QUALITY PROTEIN: photosystem II CP43 reaction center protein-like [KO:K02705]
122647877  LOW QUALITY PROTEIN: photosystem II CP43 reaction center protein-like [KO:K02705]
122647830  photosystem II D2 protein [KO:K02706] [EC:1.10.3.9]
122662146  oxygen-evolving enhancer protein 1, chloroplastic [KO:K02716]
122662147  oxygen-evolving enhancer protein 1, chloroplastic-like [KO:K02716]
122639263  oxygen-evolving enhancer protein 1, chloroplastic-like [KO:K02716]
122658017  psbP-like protein 1, chloroplastic isoform X1 [KO:K02717]
122652161  oxygen-evolving enhancer protein 2-1, chloroplastic isoform X1 [KO:K02717]
122640546  oxygen-evolving enhancer protein 2, chloroplastic-like [KO:K02717]
122646519  photosynthetic NDH subunit of lumenal location 3, chloroplastic-like [KO:K08901]
122671410  photosynthetic NDH subunit of lumenal location 2, chloroplastic [KO:K08901]
122665864  photosynthetic NDH subunit of lumenal location 3, chloroplastic-like [KO:K08901]
122666733  oxygen-evolving enhancer protein 3-1, chloroplastic-like [KO:K08901]
122655503  photosynthetic NDH subunit of lumenal location 3, chloroplastic-like [KO:K08901]
122649598  photosystem II 10 kDa polypeptide, chloroplastic isoform X1 [KO:K03541]
122669987  photosystem II 22 kDa protein, chloroplastic [KO:K03542]
122644030  photosystem II reaction center W protein, chloroplastic [KO:K02721]
122646571  photosystem II reaction center W protein, chloroplastic-like [KO:K02721]
122638395  photosystem II core complex proteins psbY, chloroplastic-like [KO:K02723]
122656755  photosystem II core complex proteins psbY, chloroplastic [KO:K02723]
122638835  photosystem II repair protein PSB27-H1, chloroplastic [KO:K08902]
122655814  photosystem II reaction center PSB28 protein, chloroplastic-like [KO:K08903]
122667873  photosystem II reaction center PSB28 protein, chloroplastic-like [KO:K08903]
122647681  photosystem I P700 chlorophyll a apoprotein A1 [KO:K02689] [EC:1.97.1.12]
122647878  photosystem I P700 chlorophyll a apoprotein A1 [KO:K02689] [EC:1.97.1.12]
122647683  photosystem I P700 chlorophyll a apoprotein A2 [KO:K02690] [EC:1.97.1.12]
122647879  photosystem I P700 chlorophyll a apoprotein A2 [KO:K02690] [EC:1.97.1.12]
122669124  photosystem I reaction center subunit II, chloroplastic [KO:K02692]
122668816  photosystem I reaction center subunit IV B, chloroplastic-like [KO:K02693]
122651863  photosystem I reaction center subunit III, chloroplastic-like [KO:K02694]
122640781  photosystem I reaction center subunit III, chloroplastic-like [KO:K02694]
122651708  photosystem I reaction center subunit V, chloroplastic [KO:K08905]
122648143  photosystem I reaction center subunit VI, chloroplastic-like [KO:K02695]
122649986  photosystem I reaction center subunit psaK, chloroplastic-like [KO:K02698]
122640548  photosystem I reaction center subunit psaK, chloroplastic-like [KO:K02698]
122644661  photosystem I reaction center subunit XI, chloroplastic [KO:K02699]
122669024  photosystem I reaction center subunit N, chloroplastic-like [KO:K02701]
122648856  photosystem I reaction center subunit N, chloroplastic-like [KO:K02701]
122648567  photosystem I subunit O [KO:K14332]
122647534  cytochrome f [KO:K02634]
122647691  cytochrome f [KO:K02634]
122647547  cytochrome b6 [KO:K02635]
122647702  cytochrome b6 [KO:K02635]
122647195  cytochrome b6-f complex iron-sulfur subunit 2, chloroplastic [KO:K02636] [EC:7.1.1.6]
122647537  cytochrome b6-f complex subunit 4 [KO:K02637]
122647695  cytochrome b6-f complex subunit 4 [KO:K02637]
122657707  plastocyanin B'/B''-like [KO:K02638]
122638358  ferredoxin C 2, chloroplastic [KO:K02639]
122671537  ferredoxin, root R-B2-like [KO:K02639]
122660306  ferredoxin-like [KO:K02639]
122662626  ferredoxin-A-like [KO:K02639]
122652065  ferredoxin C 1, chloroplastic [KO:K02639]
122653030  ferredoxin, root R-B2-like [KO:K02639]
122657491  ferredoxin--NADP reductase, leaf isozyme, chloroplastic [KO:K02641] [EC:1.18.1.2]
122661266  ferredoxin--NADP reductase, leaf isozyme, chloroplastic-like [KO:K02641] [EC:1.18.1.2]
122649517  ferredoxin--NADP reductase, root isozyme, chloroplastic [KO:K02641] [EC:1.18.1.2]
122664176  cytochrome c6, chloroplastic-like isoform X1 [KO:K08906]
122664178  cytochrome c6, chloroplastic-like [KO:K08906]
122647531  ATP synthase subunit beta, chloroplastic [KO:K02112] [EC:7.1.2.2 7.2.2.1]
122647687  ATP synthase subunit beta, chloroplastic [KO:K02112] [EC:7.1.2.2 7.2.2.1]
122647886  ATP synthase subunit beta, chloroplastic-like [KO:K02112] [EC:7.1.2.2 7.2.2.1]
122640007  ATP synthase gamma chain, chloroplastic [KO:K02115]
122647044  ATP synthase subunit alpha, chloroplastic [KO:K02111] [EC:7.1.2.2 7.2.2.1]
122647686  ATP synthase subunit alpha, chloroplastic [KO:K02111] [EC:7.1.2.2 7.2.2.1]
122669018  ATP synthase delta chain, chloroplastic-like [KO:K02113]
122663744  ATP synthase delta chain, chloroplastic-like [KO:K02113]
122667036  ATP synthase delta chain, chloroplastic-like [KO:K02113]
122647076  ATP synthase subunit b, chloroplastic [KO:K02109]
122671627  ATP synthase subunit b', chloroplastic [KO:K02109]
122647694  ATP synthase subunit b, chloroplastic [KO:K02109]
Compound
C00001  H2O
C00002  ATP
C00005  NADPH
C00006  NADP+
C00007  Oxygen
C00008  ADP
C00009  Orthophosphate
C00034  Manganese
C00080  H+
C02061  Plastoquinone
C16693  Plastoquinol
Reference
PMID:14764885
  Authors
Ferreira KN, Iverson TM, Maghlaoui K, Barber J, Iwata S.
  Title
Architecture of the photosynthetic oxygen-evolving center.
  Journal
Science 303:1831-8 (2004)
DOI:10.1126/science.1093087
Reference
PMID:12518057
  Authors
Kamiya N, Shen JR.
  Title
Crystal structure of oxygen-evolving photosystem II from Thermosynechococcus vulcanus at 3.7-A resolution.
  Journal
Proc Natl Acad Sci U S A 100:98-103 (2003)
DOI:10.1073/pnas.0135651100
Reference
PMID:11217865
  Authors
Zouni A, Witt HT, Kern J, Fromme P, Krauss N, Saenger W, Orth P.
  Title
Crystal structure of photosystem II from Synechococcus elongatus at 3.8 A resolution.
  Journal
Nature 409:739-743 (2001)
DOI:10.1038/35055589
Reference
PMID:11418848
  Authors
Jordan P, Fromme P, Witt HT, Klukas O, Saenger W, Krauss N.
  Title
Three-dimensional structure of cyanobacterial photosystem I at 2.5 A resolution.
  Journal
Nature 411:909-917 (2001)
DOI:10.1038/35082000
Reference
PMID:11369223
  Authors
Jones MR, Fyfe PK.
  Title
Photosynthesis: new light on biological oxygen production.
  Journal
Curr Biol 17:R318-R321 (2001)
DOI:10.1016/S0960-9822(01)00174-9
Reference
PMID:11914373
  Authors
Shen G, Zhao J, Reimer SK, Antonkine ML, Cai Q, Weiland SM, Golbeck JH, Bryant DA.
  Title
Assembly of photosystem I. I. Inactivation of the rubA gene encoding a membrane-associated rubredoxin in the cyanobacterium Synechococcus sp. PCC 7002 causes a loss of photosystem I activity.
  Journal
J Biol Chem 277:20343-54 (2002)
DOI:10.1074/jbc.M201103200
Related
pathway
tss00196  Photosynthesis - antenna proteins
tss00710  Carbon fixation by Calvin cycle
KO pathway
ko00195   
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