KEGG   PATHWAY: vfi01100
Entry
vfi01100                    Pathway                                
Name
Metabolic pathways - Aliivibrio fischeri ES114
Class
Pathway map
vfi01100  Metabolic pathways
vfi01100

Module
vfi_M00002  Glycolysis, core module involving three-carbon compounds [PATH:vfi01100]
vfi_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:vfi01100]
vfi_M00004  Pentose phosphate pathway (Pentose phosphate cycle) [PATH:vfi01100]
vfi_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:vfi01100]
vfi_M00006  Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:vfi01100]
vfi_M00007  Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:vfi01100]
vfi_M00009  Citrate cycle (TCA cycle, Krebs cycle) [PATH:vfi01100]
vfi_M00010  Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:vfi01100]
vfi_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:vfi01100]
vfi_M00012  Glyoxylate cycle [PATH:vfi01100]
vfi_M00015  Proline biosynthesis, glutamate => proline [PATH:vfi01100]
vfi_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:vfi01100]
vfi_M00017  Methionine biosynthesis, aspartate => homoserine => methionine [PATH:vfi01100]
vfi_M00018  Threonine biosynthesis, aspartate => homoserine => threonine [PATH:vfi01100]
vfi_M00019  Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:vfi01100]
vfi_M00020  Serine biosynthesis, glycerate-3P => serine [PATH:vfi01100]
vfi_M00021  Cysteine biosynthesis, serine => cysteine [PATH:vfi01100]
vfi_M00022  Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:vfi01100]
vfi_M00023  Tryptophan biosynthesis, chorismate => tryptophan [PATH:vfi01100]
vfi_M00024  Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine [PATH:vfi01100]
vfi_M00025  Tyrosine biosynthesis, chorismate => HPP => tyrosine [PATH:vfi01100]
vfi_M00026  Histidine biosynthesis, PRPP => histidine [PATH:vfi01100]
vfi_M00028  Ornithine biosynthesis, glutamate => ornithine [PATH:vfi01100]
vfi_M00033  Ectoine biosynthesis, aspartate => ectoine [PATH:vfi01100]
vfi_M00045  Histidine degradation, histidine => N-formiminoglutamate => glutamate [PATH:vfi01100]
vfi_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:vfi01100]
vfi_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:vfi01100]
vfi_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:vfi01100]
vfi_M00051  De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP [PATH:vfi01100]
vfi_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:vfi01100]
vfi_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:vfi01100]
vfi_M00060  KDO2-lipid A biosynthesis, Raetz pathway, LpxL-LpxM type [PATH:vfi01100]
vfi_M00063  CMP-KDO biosynthesis [PATH:vfi01100]
vfi_M00064  ADP-L-glycero-D-manno-heptose biosynthesis [PATH:vfi01100]
vfi_M00082  Fatty acid biosynthesis, initiation [PATH:vfi01100]
vfi_M00083  Fatty acid biosynthesis, elongation [PATH:vfi01100]
vfi_M00086  beta-Oxidation, acyl-CoA synthesis [PATH:vfi01100]
vfi_M00087  beta-Oxidation [PATH:vfi01100]
vfi_M00093  Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:vfi01100]
vfi_M00096  C5 isoprenoid biosynthesis, non-mevalonate pathway [PATH:vfi01100]
vfi_M00115  NAD biosynthesis, aspartate => quinolinate => NAD [PATH:vfi01100]
vfi_M00116  Menaquinone biosynthesis, chorismate (+ polyprenyl-PP) => menaquinol [PATH:vfi01100]
vfi_M00117  Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH:vfi01100]
vfi_M00118  Glutathione biosynthesis, glutamate => glutathione [PATH:vfi01100]
vfi_M00120  Coenzyme A biosynthesis, pantothenate => CoA [PATH:vfi01100]
vfi_M00121  Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:vfi01100]
vfi_M00123  Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:vfi01100]
vfi_M00124  Pyridoxal-P biosynthesis, erythrose-4P => pyridoxal-P [PATH:vfi01100]
vfi_M00126  Tetrahydrofolate biosynthesis, GTP => THF [PATH:vfi01100]
vfi_M00127  Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP [PATH:vfi01100]
vfi_M00140  C1-unit interconversion, prokaryotes [PATH:vfi01100]
vfi_M00149  Succinate dehydrogenase, prokaryotes [PATH:vfi01100]
vfi_M00150  Fumarate reductase, prokaryotes [PATH:vfi01100]
vfi_M00151  Cytochrome bc1 complex respiratory unit [PATH:vfi01100]
vfi_M00156  Cytochrome c oxidase, cbb3-type [PATH:vfi01100]
vfi_M00157  F-type ATPase, prokaryotes and chloroplasts [PATH:vfi01100]
vfi_M00168  CAM (Crassulacean acid metabolism), dark [PATH:vfi01100]
vfi_M00176  Assimilatory sulfate reduction, sulfate => H2S [PATH:vfi01100]
vfi_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:vfi01100]
vfi_M00364  C10-C20 isoprenoid biosynthesis, bacteria [PATH:vfi01100]
vfi_M00432  Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:vfi01100]
vfi_M00530  Dissimilatory nitrate reduction, nitrate => ammonia [PATH:vfi01100]
vfi_M00554  Nucleotide sugar biosynthesis, galactose => UDP-galactose [PATH:vfi01100]
vfi_M00570  Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:vfi01100]
vfi_M00579  Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate [PATH:vfi01100]
vfi_M00621  Glycine cleavage system [PATH:vfi01100]
vfi_M00632  Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P [PATH:vfi01100]
vfi_M00844  Arginine biosynthesis, ornithine => arginine [PATH:vfi01100]
vfi_M00854  Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:vfi01100]
vfi_M00880  Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:vfi01100]
vfi_M00881  Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:vfi01100]
vfi_M00899  Thiamine salvage pathway, HMP/HET => TMP [PATH:vfi01100]
vfi_M00918  Aerobactin biosynthesis, lysine => aerobactin [PATH:vfi01100]
vfi_M00970  Proline degradation, proline => glutamate [PATH:vfi01100]
Organism
Aliivibrio fischeri ES114 [GN:vfi]
Related
pathway
vfi00010  Glycolysis / Gluconeogenesis
vfi00020  Citrate cycle (TCA cycle)
vfi00030  Pentose phosphate pathway
vfi00040  Pentose and glucuronate interconversions
vfi00051  Fructose and mannose metabolism
vfi00052  Galactose metabolism
vfi00061  Fatty acid biosynthesis
vfi00071  Fatty acid degradation
vfi00074  Mycolic acid biosynthesis
vfi00121  Secondary bile acid biosynthesis
vfi00130  Ubiquinone and other terpenoid-quinone biosynthesis
vfi00190  Oxidative phosphorylation
vfi00220  Arginine biosynthesis
vfi00230  Purine metabolism
vfi00240  Pyrimidine metabolism
vfi00250  Alanine, aspartate and glutamate metabolism
vfi00260  Glycine, serine and threonine metabolism
vfi00261  Monobactam biosynthesis
vfi00270  Cysteine and methionine metabolism
vfi00280  Valine, leucine and isoleucine degradation
vfi00290  Valine, leucine and isoleucine biosynthesis
vfi00300  Lysine biosynthesis
vfi00310  Lysine degradation
vfi00330  Arginine and proline metabolism
vfi00332  Carbapenem biosynthesis
vfi00340  Histidine metabolism
vfi00350  Tyrosine metabolism
vfi00360  Phenylalanine metabolism
vfi00362  Benzoate degradation
vfi00380  Tryptophan metabolism
vfi00400  Phenylalanine, tyrosine and tryptophan biosynthesis
vfi00401  Novobiocin biosynthesis
vfi00410  beta-Alanine metabolism
vfi00430  Taurine and hypotaurine metabolism
vfi00450  Selenocompound metabolism
vfi00460  Cyanoamino acid metabolism
vfi00470  D-Amino acid metabolism
vfi00480  Glutathione metabolism
vfi00500  Starch and sucrose metabolism
vfi00511  Other glycan degradation
vfi00520  Amino sugar and nucleotide sugar metabolism
vfi00521  Streptomycin biosynthesis
vfi00523  Polyketide sugar unit biosynthesis
vfi00525  Acarbose and validamycin biosynthesis
vfi00540  Lipopolysaccharide biosynthesis
vfi00541  O-Antigen nucleotide sugar biosynthesis
vfi00542  O-Antigen repeat unit biosynthesis
vfi00543  Exopolysaccharide biosynthesis
vfi00550  Peptidoglycan biosynthesis
vfi00552  Teichoic acid biosynthesis
vfi00561  Glycerolipid metabolism
vfi00562  Inositol phosphate metabolism
vfi00564  Glycerophospholipid metabolism
vfi00565  Ether lipid metabolism
vfi00592  alpha-Linolenic acid metabolism
vfi00600  Sphingolipid metabolism
vfi00620  Pyruvate metabolism
vfi00625  Chloroalkane and chloroalkene degradation
vfi00626  Naphthalene degradation
vfi00627  Aminobenzoate degradation
vfi00630  Glyoxylate and dicarboxylate metabolism
vfi00633  Nitrotoluene degradation
vfi00640  Propanoate metabolism
vfi00643  Styrene degradation
vfi00650  Butanoate metabolism
vfi00660  C5-Branched dibasic acid metabolism
vfi00670  One carbon pool by folate
vfi00680  Methane metabolism
vfi00710  Carbon fixation by Calvin cycle
vfi00720  Other carbon fixation pathways
vfi00730  Thiamine metabolism
vfi00740  Riboflavin metabolism
vfi00750  Vitamin B6 metabolism
vfi00760  Nicotinate and nicotinamide metabolism
vfi00770  Pantothenate and CoA biosynthesis
vfi00780  Biotin metabolism
vfi00785  Lipoic acid metabolism
vfi00790  Folate biosynthesis
vfi00860  Porphyrin metabolism
vfi00900  Terpenoid backbone biosynthesis
vfi00907  Pinene, camphor and geraniol degradation
vfi00910  Nitrogen metabolism
vfi00920  Sulfur metabolism
vfi00930  Caprolactam degradation
vfi00997  Biosynthesis of various other secondary metabolites
vfi00998  Biosynthesis of various antibiotics
vfi00999  Biosynthesis of various plant secondary metabolites
vfi01040  Biosynthesis of unsaturated fatty acids
KO pathway
ko01100   
LinkDB

DBGET integrated database retrieval system