KEGG   PATHWAY: vim01100
Entry
vim01100                    Pathway                                
Name
Metabolic pathways - Virgibacillus sp. MSP4-1
Class
Pathway map
vim01100  Metabolic pathways
vim01100

Module
vim_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:vim01100]
vim_M00002  Glycolysis, core module involving three-carbon compounds [PATH:vim01100]
vim_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:vim01100]
vim_M00004  Pentose phosphate pathway (Pentose phosphate cycle) [PATH:vim01100]
vim_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:vim01100]
vim_M00006  Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:vim01100]
vim_M00007  Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:vim01100]
vim_M00009  Citrate cycle (TCA cycle, Krebs cycle) [PATH:vim01100]
vim_M00010  Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:vim01100]
vim_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:vim01100]
vim_M00012  Glyoxylate cycle [PATH:vim01100]
vim_M00015  Proline biosynthesis, glutamate => proline [PATH:vim01100]
vim_M00018  Threonine biosynthesis, aspartate => homoserine => threonine [PATH:vim01100]
vim_M00019  Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:vim01100]
vim_M00021  Cysteine biosynthesis, serine => cysteine [PATH:vim01100]
vim_M00022  Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:vim01100]
vim_M00023  Tryptophan biosynthesis, chorismate => tryptophan [PATH:vim01100]
vim_M00026  Histidine biosynthesis, PRPP => histidine [PATH:vim01100]
vim_M00033  Ectoine biosynthesis, aspartate => ectoine [PATH:vim01100]
vim_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:vim01100]
vim_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:vim01100]
vim_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:vim01100]
vim_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:vim01100]
vim_M00082  Fatty acid biosynthesis, initiation [PATH:vim01100]
vim_M00083  Fatty acid biosynthesis, elongation [PATH:vim01100]
vim_M00086  beta-Oxidation, acyl-CoA synthesis [PATH:vim01100]
vim_M00087  beta-Oxidation [PATH:vim01100]
vim_M00096  C5 isoprenoid biosynthesis, non-mevalonate pathway [PATH:vim01100]
vim_M00116  Menaquinone biosynthesis, chorismate (+ polyprenyl-PP) => menaquinol [PATH:vim01100]
vim_M00119  Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH:vim01100]
vim_M00120  Coenzyme A biosynthesis, pantothenate => CoA [PATH:vim01100]
vim_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:vim01100]
vim_M00126  Tetrahydrofolate biosynthesis, GTP => THF [PATH:vim01100]
vim_M00151  Cytochrome bc1 complex respiratory unit [PATH:vim01100]
vim_M00155  Cytochrome c oxidase, prokaryotes [PATH:vim01100]
vim_M00157  F-type ATPase, prokaryotes and chloroplasts [PATH:vim01100]
vim_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:vim01100]
vim_M00364  C10-C20 isoprenoid biosynthesis, bacteria [PATH:vim01100]
vim_M00416  Cytochrome aa3-600 menaquinol oxidase [PATH:vim01100]
vim_M00432  Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:vim01100]
vim_M00525  Lysine biosynthesis, acetyl-DAP pathway, aspartate => lysine [PATH:vim01100]
vim_M00527  Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine [PATH:vim01100]
vim_M00549  Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:vim01100]
vim_M00554  Nucleotide sugar biosynthesis, galactose => UDP-galactose [PATH:vim01100]
vim_M00555  Betaine biosynthesis, choline => betaine [PATH:vim01100]
vim_M00570  Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:vim01100]
vim_M00579  Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate [PATH:vim01100]
vim_M00609  Cysteine biosynthesis, methionine => cysteine [PATH:vim01100]
vim_M00621  Glycine cleavage system [PATH:vim01100]
vim_M00632  Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P [PATH:vim01100]
vim_M00793  dTDP-L-rhamnose biosynthesis [PATH:vim01100]
vim_M00844  Arginine biosynthesis, ornithine => arginine [PATH:vim01100]
vim_M00880  Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:vim01100]
vim_M00899  Thiamine salvage pathway, HMP/HET => TMP [PATH:vim01100]
vim_M00909  UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:vim01100]
vim_M00916  Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P [PATH:vim01100]
vim_M00970  Proline degradation, proline => glutamate [PATH:vim01100]
vim_M00972  Proline metabolism [PATH:vim01100]
Organism
Virgibacillus sp. MSP4-1 [GN:vim]
Related
pathway
vim00010  Glycolysis / Gluconeogenesis
vim00020  Citrate cycle (TCA cycle)
vim00030  Pentose phosphate pathway
vim00040  Pentose and glucuronate interconversions
vim00051  Fructose and mannose metabolism
vim00052  Galactose metabolism
vim00053  Ascorbate and aldarate metabolism
vim00061  Fatty acid biosynthesis
vim00071  Fatty acid degradation
vim00074  Mycolic acid biosynthesis
vim00130  Ubiquinone and other terpenoid-quinone biosynthesis
vim00190  Oxidative phosphorylation
vim00220  Arginine biosynthesis
vim00230  Purine metabolism
vim00240  Pyrimidine metabolism
vim00250  Alanine, aspartate and glutamate metabolism
vim00260  Glycine, serine and threonine metabolism
vim00261  Monobactam biosynthesis
vim00270  Cysteine and methionine metabolism
vim00280  Valine, leucine and isoleucine degradation
vim00290  Valine, leucine and isoleucine biosynthesis
vim00300  Lysine biosynthesis
vim00310  Lysine degradation
vim00330  Arginine and proline metabolism
vim00332  Carbapenem biosynthesis
vim00340  Histidine metabolism
vim00350  Tyrosine metabolism
vim00360  Phenylalanine metabolism
vim00362  Benzoate degradation
vim00380  Tryptophan metabolism
vim00400  Phenylalanine, tyrosine and tryptophan biosynthesis
vim00401  Novobiocin biosynthesis
vim00410  beta-Alanine metabolism
vim00430  Taurine and hypotaurine metabolism
vim00450  Selenocompound metabolism
vim00460  Cyanoamino acid metabolism
vim00470  D-Amino acid metabolism
vim00480  Glutathione metabolism
vim00500  Starch and sucrose metabolism
vim00520  Amino sugar and nucleotide sugar metabolism
vim00521  Streptomycin biosynthesis
vim00523  Polyketide sugar unit biosynthesis
vim00525  Acarbose and validamycin biosynthesis
vim00540  Lipopolysaccharide biosynthesis
vim00541  O-Antigen nucleotide sugar biosynthesis
vim00542  O-Antigen repeat unit biosynthesis
vim00543  Exopolysaccharide biosynthesis
vim00550  Peptidoglycan biosynthesis
vim00552  Teichoic acid biosynthesis
vim00561  Glycerolipid metabolism
vim00562  Inositol phosphate metabolism
vim00564  Glycerophospholipid metabolism
vim00592  alpha-Linolenic acid metabolism
vim00620  Pyruvate metabolism
vim00622  Xylene degradation
vim00625  Chloroalkane and chloroalkene degradation
vim00626  Naphthalene degradation
vim00627  Aminobenzoate degradation
vim00630  Glyoxylate and dicarboxylate metabolism
vim00640  Propanoate metabolism
vim00643  Styrene degradation
vim00650  Butanoate metabolism
vim00660  C5-Branched dibasic acid metabolism
vim00670  One carbon pool by folate
vim00680  Methane metabolism
vim00710  Carbon fixation by Calvin cycle
vim00720  Other carbon fixation pathways
vim00730  Thiamine metabolism
vim00740  Riboflavin metabolism
vim00750  Vitamin B6 metabolism
vim00760  Nicotinate and nicotinamide metabolism
vim00770  Pantothenate and CoA biosynthesis
vim00780  Biotin metabolism
vim00785  Lipoic acid metabolism
vim00790  Folate biosynthesis
vim00860  Porphyrin metabolism
vim00900  Terpenoid backbone biosynthesis
vim00907  Pinene, camphor and geraniol degradation
vim00910  Nitrogen metabolism
vim00920  Sulfur metabolism
vim00999  Biosynthesis of various plant secondary metabolites
KO pathway
ko01100   
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