KEGG   PATHWAY: vvi03010
Entry
vvi03010                    Pathway                                
Name
Ribosome - Vitis vinifera (wine grape)
Class
Genetic Information Processing; Translation
Pathway map
vvi03010  Ribosome
vvi03010

Organism
Vitis vinifera (wine grape) [GN:vvi]
Gene
100240915  protein PIGMENT DEFECTIVE 338, chloroplastic [KO:K02945]
100265325  small ribosomal subunit protein bS1c [KO:K02945]
100264069  small ribosomal subunit protein uS2m [KO:K02967]
4025096  rps2; ribosomal protein S2 [KO:K02967]
4025021  rps3; ribosomal protein S3 [KO:K02982]
7498623  rps3; ribosomal protein S3 [KO:K02982]
104878382  small ribosomal subunit protein uS4m [KO:K02986]
4025094  rps4; ribosomal protein S4 [KO:K02986]
7498552  rps4; ribosomal protein S4 [KO:K02986]
100267778  uncharacterized protein LOC100267778 [KO:K02988]
100256785  uncharacterized protein LOC100256785 [KO:K02990]
100244408  small ribosomal subunit protein bS6c [KO:K02990]
4025013  rps7; ribosomal protein S7 [KO:K02992]
4025062  rps7; ribosomal protein S7 [KO:K02992]
7498563  rps7; ribosomal protein S7 [KO:K02992]
132254818  small ribosomal subunit protein uS7cz/uS7cy [KO:K02992]
4025135  rps8; ribosomal protein S8 [KO:K02994]
100248841  small ribosomal subunit protein uS9c [KO:K02996]
100246720  small ribosomal subunit protein uS9m [KO:K02996]
100248042  small ribosomal subunit protein uS10c [KO:K02946]
7498628  rps10; ribosomal protein S10 [KO:K02946]
4025132  rps11; ribosomal protein S11 [KO:K02948]
7498608  rps11; ribosomal protein S11 [KO:K02948]
100256569  small ribosomal subunit protein uS11m [KO:K02948]
7498612  rps12; ribosomal protein S12 [KO:K02950]
4025012  rps12; ribosomal protein S12 [KO:K02950]
4025063  rps12; ribosomal protein S12 [KO:K02950]
100254016  small ribosomal subunit protein uS13c [KO:K02952]
7498567  rps13; ribosomal protein S13 [KO:K02952]
4025089  rps14; ribosomal protein S14 [KO:K02954]
7498609  rps14; ribosomal protein S14 [KO:K02954]
4025073  rps15; ribosomal protein S15 [KO:K02956]
7498561  rps15; ribosomal protein S15 [KO:K02956]
4025122  rps16; ribosomal protein S16 [KO:K02959]
100245562  small ribosomal subunit protein bS16m/bS16c [KO:K02959]
100244712  uncharacterized protein LOC100244712 [KO:K02961]
100251530  small ribosomal subunit protein uS17c [KO:K02961]
4025061  rps18; ribosomal protein S18 [KO:K02963]
7498604  rps18; ribosomal protein S18 [KO:K02963]
7498518  rps19; ribosomal protein S19 [KO:K02965]
4025023  rps19; ribosomal protein S19 [KO:K02965]
7498602  rps19; ribosomal protein S19 [KO:K02965]
7498601  rps19; ribosomal protein S19 [KO:K02965]
100265925  small ribosomal subunit protein bS20c [KO:K02968]
100250949  LOW QUALITY PROTEIN: uncharacterized protein LOC100250949 [KO:K02970]
100855184  uncharacterized protein LOC100855184 [KO:K02970]
100260573  uncharacterized protein LOC100260573 [KO:K02981]
100261737  small ribosomal subunit protein uS3x [KO:K02985]
100266287  small ribosomal subunit protein uS3x isoform X2 [KO:K02985]
100259512  small ribosomal subunit protein uS3x [KO:K02985]
100232969  small ribosomal subunit protein eS1y-like [KO:K02984]
100249434  small ribosomal subunit protein eS1z [KO:K02984]
100244922  small ribosomal subunit protein eS4z [KO:K02987]
100263779  small ribosomal subunit protein eS4 [KO:K02987]
100262686  small ribosomal subunit protein eS4x [KO:K02987]
100243591  small ribosomal subunit protein uS7 [KO:K02989]
100232926  small ribosomal subunit protein uS7 [KO:K02989]
100257717  small ribosomal subunit protein eS6 [KO:K02991]
100257541  small ribosomal subunit protein eS6 [KO:K02991]
100251294  small ribosomal subunit protein eS6 [KO:K02991]
100253080  small ribosomal subunit protein eS7 [KO:K02993]
100241243  small ribosomal subunit protein eS7 [KO:K02993]
100252536  small ribosomal subunit protein eS7 [KO:K02993]
100854440  small ribosomal subunit protein eS8 [KO:K02995]
100257178  small ribosomal subunit protein eS8 [KO:K02995]
100257147  small ribosomal subunit protein eS8 [KO:K02995]
100267189  small ribosomal subunit protein uS4y [KO:K02997]
100264515  small ribosomal subunit protein uS4y [KO:K02997]
100260300  small ribosomal subunit protein uS4y [KO:K02997]
100257720  small ribosomal subunit protein eS10z [KO:K02947]
100243340  small ribosomal subunit protein eS10z [KO:K02947]
100265421  small ribosomal subunit protein uS17 [KO:K02949]
100244095  small ribosomal subunit protein uS17 [KO:K02949]
100265590  small ribosomal subunit protein eS12 isoform X2 [KO:K02951]
100255187  small ribosomal subunit protein eS12 [KO:K02951]
100242961  small ribosomal subunit protein uS15 [KO:K02953]
100242146  small ribosomal subunit protein uS15 [KO:K02953]
100248468  small ribosomal subunit protein uS11z [KO:K02955]
100256298  small ribosomal subunit protein uS11z [KO:K02955]
100255492  small ribosomal subunit protein uS11z [KO:K02955]
100263010  small ribosomal subunit protein uS19 [KO:K02958]
100256302  small ribosomal subunit protein uS19 [KO:K02958]
100243108  small ribosomal subunit protein uS8 [KO:K02957]
100249819  small ribosomal subunit protein uS8my [KO:K02957]
100258124  small ribosomal subunit protein uS8 [KO:K02957]
100243853  small ribosomal subunit protein uS9 [KO:K02960]
100250286  small ribosomal subunit protein uS9 [KO:K02960]
100254540  small ribosomal subunit protein uS9 [KO:K02960]
100256195  small ribosomal subunit protein eS17 [KO:K02962]
100243000  small ribosomal subunit protein eS17 [KO:K02962]
100245272  small ribosomal subunit protein uS13z/uS13y/uS13x isoform X2 [KO:K02964]
100254425  small ribosomal subunit protein uS13z/uS13y/uS13x [KO:K02964]
100855135  small ribosomal subunit protein uS13z/uS13y/uS13x isoform X2 [KO:K02964]
100266271  small ribosomal subunit protein eS19z [KO:K02966]
100255295  small ribosomal subunit protein eS19x [KO:K02966]
100258347  small ribosomal subunit protein uS10y [KO:K02969]
100246017  small ribosomal subunit protein eS21 [KO:K02971]
100266516  small ribosomal subunit protein eS21 [KO:K02971]
100248226  small ribosomal subunit protein uS12 [KO:K02973]
100242825  small ribosomal subunit protein uS12 [KO:K02973]
100265528  small ribosomal subunit protein uS12 [KO:K02973]
100243420  small ribosomal subunit protein eS24z isoform X2 [KO:K02974]
100853567  small ribosomal subunit protein eS24z [KO:K02974]
100249356  small ribosomal subunit protein eS25 [KO:K02975]
100265344  small ribosomal subunit protein eS25 [KO:K02975]
100258834  small ribosomal subunit protein eS25y [KO:K02975]
100265511  small ribosomal subunit protein eS26x [KO:K02976]
100260347  small ribosomal subunit protein eS26x isoform X2 [KO:K02976]
100248991  small ribosomal subunit protein eS27y [KO:K02978]
100248037  small ribosomal subunit protein eS27y [KO:K02978]
100247863  ubiquitin-ribosomal protein eS31 fusion protein [KO:K02977]
100259511  ubiquitin-ribosomal protein eS31 fusion protein [KO:K02977]
100258943  ubiquitin-ribosomal protein eS31 fusion protein [KO:K02977]
100254883  small ribosomal subunit protein uS2 [KO:K02998]
100244868  large ribosomal subunit protein uL1c [KO:K02863]
4025024  rpl2; ribosomal protein L2 [KO:K02886]
100267754  large ribosomal subunit protein uL3c [KO:K02906]
100257955  large ribosomal subunit protein uL3m [KO:K02906]
100265870  uncharacterized protein LOC100265870 [KO:K02926]
104879610  large ribosomal subunit protein uL4c [KO:K02926]
100251632  large ribosomal subunit protein uL5c [KO:K02931]
100263647  large ribosomal subunit protein uL6c [KO:K02933]
100247870  large ribosomal subunit protein uL6m [KO:K02933]
100257626  large ribosomal subunit protein bL12c [KO:K02935]
100250558  uncharacterized protein LOC100250558 [KO:K02935]
100854962  uncharacterized protein LOC100854962 [KO:K02935]
100246777  uncharacterized protein LOC100246777 [KO:K02935]
100260435  uncharacterized protein LOC100260435 [KO:K02935]
100260703  uncharacterized protein LOC100260703 [KO:K02939]
100251697  large ribosomal subunit protein bL9c [KO:K02939]
100245108  large ribosomal subunit protein uL10c [KO:K02864]
100257643  large ribosomal subunit protein uL11m [KO:K02867]
100263279  large ribosomal subunit protein uL11c [KO:K02867]
100252470  uncharacterized protein LOC100252470 [KO:K02871]
100248623  large ribosomal subunit protein uL13c [KO:K02871]
100241180  large ribosomal subunit protein uL14mz isoform X1 [KO:K02874]
4025019  rpl14; ribosomal protein L14 [KO:K02874]
7498600  rpl14; ribosomal protein L14 [KO:K02874]
100268043  large ribosomal subunit protein uL15c [KO:K02876]
100251266  54S ribosomal protein L10, mitochondrial [KO:K02876]
7498629  rpl16; ribosomal protein L16 [KO:K02878]
4025020  rpl16; ribosomal protein L16 [KO:K02878]
7498627  rpl16; ribosomal protein L16 [KO:K02878]
100263106  large ribosomal subunit protein bL17c [KO:K02879]
100252405  uncharacterized protein LOC100252405 [KO:K02879]
100246602  uncharacterized protein LOC100246602 [KO:K02881]
100249372  uncharacterized protein LOC100249372 [KO:K02881]
100261418  large ribosomal subunit protein uL18c [KO:K02881]
100255272  uncharacterized protein LOC100255272 isoform X1 [KO:K02884]
100263826  large ribosomal subunit protein bL19c [KO:K02884]
7498616  rpl20; ribosomal protein L20 [KO:K02887]
4025123  rpl20; ribosomal protein L20 [KO:K02887]
100263906  uncharacterized protein LOC100263906 [KO:K02887]
100245717  large ribosomal subunit protein bL21m [KO:K02888]
100255002  large ribosomal subunit protein bL21c [KO:K02888]
4025022  rpl22; ribosomal protein L22 [KO:K02890]
100266839  uncharacterized protein LOC100266839 [KO:K02890]
4025136  rpl23; ribosomal protein L23 [KO:K02892]
4025025  rpl23; ribosomal protein L23 [KO:K02892]
100245960  uncharacterized protein LOC100245960 isoform X1 [KO:K02892]
100250357  large ribosomal subunit protein uL24c [KO:K02895]
100852679  uncharacterized protein LOC100852679 [KO:K02895]
100255348  uncharacterized protein LOC100255348 [KO:K02897]
100854002  uncharacterized protein LOC100854002 [KO:K02897]
100242725  uncharacterized protein LOC100242725 [KO:K02897]
100260093  large ribosomal subunit protein bL27c [KO:K02899]
100853593  uncharacterized protein LOC100853593 [KO:K02899]
100244165  large ribosomal subunit protein bL28c [KO:K02902]
100262488  large ribosomal subunit protein bL28m [KO:K02902]
104877824  50S ribosomal protein L29, chloroplastic [KO:K02904]
100250681  large ribosomal subunit protein bL31c [KO:K02909]
132255317  large ribosomal subunit protein bL31c-like [KO:K02909]
4025036  rpl32; ribosomal protein L32 [KO:K02911]
7498560  rpl32; ribosomal protein L32 [KO:K02911]
100264586  uncharacterized protein LOC100264586 [KO:K02911]
7498622  rpl33; ribosomal protein L33 [KO:K02913]
4025060  rpl33; ribosomal protein L33 [KO:K02913]
100265274  uncharacterized protein LOC100265274 [KO:K02914]
100258321  large ribosomal subunit protein bL34c [KO:K02914]
100257357  large ribosomal subunit protein bL35c [KO:K02916]
100252143  large ribosomal subunit protein bL35c [KO:K02916]
100250810  uncharacterized protein LOC100250810 [KO:K02919]
7498541  rpl36; ribosomal protein L36 [KO:K02919]
4025133  rpl36; ribosomal protein L36 [KO:K02919]
100267716  large ribosomal subunit protein uL3y [KO:K02925]
100260533  large ribosomal subunit protein uL3 [KO:K02925]
100241789  large ribosomal subunit protein uL4-like [KO:K02930]
100255110  large ribosomal subunit protein uL4 [KO:K02930]
100267208  LOW QUALITY PROTEIN: large ribosomal subunit protein uL4-like [KO:K02930]
100251826  large ribosomal subunit protein uL4 [KO:K02930]
100242372  large ribosomal subunit protein uL18 [KO:K02932]
100262824  large ribosomal subunit protein uL18 [KO:K02932]
100257150  large ribosomal subunit protein eL6z [KO:K02934]
100252724  large ribosomal subunit protein eL6x [KO:K02934]
100242794  large ribosomal subunit protein uL30y [KO:K02937]
100245039  large ribosomal subunit protein uL30y [KO:K02937]
100267028  large ribosomal subunit protein uL30y [KO:K02937]
132254333  large ribosomal subunit protein uL30x [KO:K02937]
109122235  large ribosomal subunit protein uL30w-like [KO:K02937]
132254298  large ribosomal subunit protein uL30x-like [KO:K02937]
104880426  LOW QUALITY PROTEIN: large ribosomal subunit protein uL30y [KO:K02937]
100266932  large ribosomal subunit protein eL8y [KO:K02936]
100246265  large ribosomal subunit protein eL8y [KO:K02936]
100255902  large ribosomal subunit protein eL8y [KO:K02936]
100258586  large ribosomal subunit protein uL2 [KO:K02938]
100248750  large ribosomal subunit protein uL2 [KO:K02938]
100247214  large ribosomal subunit protein uL2 [KO:K02938]
100253227  large ribosomal subunit protein uL6 [KO:K02940]
100252127  large ribosomal subunit protein uL6 isoform X2 [KO:K02940]
100241995  large ribosomal subunit protein uL16 [KO:K02866]
100262228  large ribosomal subunit protein uL16 [KO:K02866]
100266487  large ribosomal subunit protein uL1z [KO:K02865]
100263858  large ribosomal subunit protein uL1 [KO:K02865]
100251464  large ribosomal subunit protein uL5z [KO:K02868]
100243655  large ribosomal subunit protein uL5 [KO:K02868]
100246959  large ribosomal subunit protein uL5z [KO:K02868]
100267052  large ribosomal subunit protein uL11 [KO:K02870]
100244384  large ribosomal subunit protein uL11 [KO:K02870]
100853149  large ribosomal subunit protein uL11 [KO:K02870]
100257471  large ribosomal subunit protein eL13z [KO:K02873]
100246745  large ribosomal subunit protein eL13z [KO:K02873]
100261957  large ribosomal subunit protein uL13w [KO:K02872]
100267451  large ribosomal subunit protein uL13w [KO:K02872]
100260208  large ribosomal subunit protein eL14z isoform X2 [KO:K02875]
100264927  large ribosomal subunit protein eL14z [KO:K02875]
100852778  large ribosomal subunit protein eL15z [KO:K02877]
100249052  large ribosomal subunit protein eL15z [KO:K02877]
100246159  large ribosomal subunit protein eL15z [KO:K02877]
100262608  large ribosomal subunit protein uL22y [KO:K02880]
100242281  LOW QUALITY PROTEIN: large ribosomal subunit protein uL22y [KO:K02880]
100257483  large ribosomal subunit protein uL22y [KO:K02880]
132253175  large ribosomal subunit protein uL22y-like [KO:K02880]
100250430  large ribosomal subunit protein eL18y [KO:K02883]
100256800  large ribosomal subunit protein eL18y [KO:K02883]
100260572  60S ribosomal protein L18a-like [KO:K02882]
100265789  large ribosomal subunit protein eL20 [KO:K02882]
100255695  large ribosomal subunit protein eL20 [KO:K02882]
100246855  large ribosomal subunit protein eL19z [KO:K02885]
100267158  large ribosomal subunit protein eL19z [KO:K02885]
100243484  large ribosomal subunit protein eL21z/eL21y [KO:K02889]
100241755  large ribosomal subunit protein eL21z/eL21y [KO:K02889]
100262509  large ribosomal subunit protein eL21z/eL21y [KO:K02889]
100266503  large ribosomal subunit protein eL22z [KO:K02891]
100258955  large ribosomal subunit protein eL22z [KO:K02891]
100261409  large ribosomal subunit protein eL22z [KO:K02891]
100260136  large ribosomal subunit protein eL22z [KO:K02891]
100242525  large ribosomal subunit protein uL14 isoform X2 [KO:K02894]
100246504  large ribosomal subunit protein uL23 [KO:K02893]
100254719  large ribosomal subunit protein uL23 [KO:K02893]
100262091  large ribosomal subunit protein uL23 [KO:K02893]
100245887  large ribosomal subunit protein eL24 [KO:K02896]
100263161  probable ribosome biogenesis protein RLP24 [KO:K02896]
100252367  large ribosomal subunit protein eL24 [KO:K02896]
100246956  large ribosomal subunit protein eL24 isoform X1 [KO:K02896]
100250021  probable ribosome biogenesis protein RLP24 [KO:K02896]
100242242  large ribosomal subunit protein uL24z [KO:K02898]
100267018  large ribosomal subunit protein uL24z [KO:K02898]
100261052  large ribosomal subunit protein eL27x [KO:K02901]
100250703  large ribosomal subunit protein eL27 [KO:K02901]
100259736  large ribosomal subunit protein uL15x [KO:K02900]
100250874  large ribosomal subunit protein uL15x [KO:K02900]
100250040  large ribosomal subunit protein uL15x [KO:K02900]
100261817  large ribosomal subunit protein eL28y [KO:K02903]
100245594  60S ribosomal protein L28-1 [KO:K02903]
100256025  large ribosomal subunit protein eL30 [KO:K02908]
100267090  large ribosomal subunit protein eL30 isoform X2 [KO:K02908]
100253901  large ribosomal subunit protein eL30z [KO:K02908]
100267870  large ribosomal subunit protein eL31 [KO:K02910]
100855296  large ribosomal subunit protein eL31 [KO:K02910]
100243581  large ribosomal subunit protein eL32z [KO:K02912]
100241158  large ribosomal subunit protein eL32z [KO:K02912]
100241433  large ribosomal subunit protein eL34 [KO:K02915]
100252617  large ribosomal subunit protein eL34 [KO:K02915]
100246718  large ribosomal subunit protein uL29 [KO:K02918]
100265729  large ribosomal subunit protein uL29 [KO:K02918]
100258134  large ribosomal subunit protein eL33w [KO:K02917]
100242662  large ribosomal subunit protein eL33w [KO:K02917]
100262717  large ribosomal subunit protein eL36x [KO:K02920]
100251636  large ribosomal subunit protein eL36x [KO:K02920]
100253219  large ribosomal subunit protein eL37x isoform X2 [KO:K02922]
100247371  large ribosomal subunit protein eL37x [KO:K02922]
100244425  large ribosomal subunit protein eL43 [KO:K02921]
100254103  large ribosomal subunit protein eL43 [KO:K02921]
100854038  large ribosomal subunit protein eL38z/eL38y [KO:K02923]
100268138  60S ribosomal protein L38 [KO:K02923]
100253716  ubiquitin-ribosomal protein eL40z fusion protein [KO:K02927]
100246002  ubiquitin-ribosomal protein eL40 fusion protein isoform X2 [KO:K02927]
104878992  large ribosomal subunit protein eL42 [KO:K02929]
100259458  large ribosomal subunit protein eL42 isoform X2 [KO:K02929]
100261906  large ribosomal subunit protein eL42 isoform X2 [KO:K02929]
100250067  large ribosomal subunit protein uL10 [KO:K02941]
100254737  large ribosomal subunit protein uL10 [KO:K02941]
100250225  large ribosomal subunit protein uL10y [KO:K02941]
100249556  large ribosomal subunit protein P1 [KO:K02942]
100261912  large ribosomal subunit protein P1 [KO:K02942]
109124269  large ribosomal subunit protein P1 [KO:K02942]
100257825  large ribosomal subunit protein P1 [KO:K02942]
100259048  large ribosomal subunit protein P3 [KO:K02942]
100254522  large ribosomal subunit protein P2 [KO:K02943]
100257998  large ribosomal subunit protein P2B [KO:K02943]
100241998  large ribosomal subunit protein P2 [KO:K02943]
100241445  60S acidic ribosomal protein P2B-like [KO:K02943]
4025065  ViviCr001; 16S ribosomal RNA [KO:K01979]
132253036  18S ribosomal RNA [KO:K01979]
132255256  18S ribosomal RNA [KO:K01979]
4025079  ViviCr007; 23S ribosomal RNA [KO:K01982]
132253038  28S ribosomal RNA [KO:K01982]
132255265  28S ribosomal RNA [KO:K01982]
4025031  ViviCr004; 5S ribosomal RNA [KO:K01981]
4025077  ViviCr005; 5S ribosomal RNA [KO:K01981]
7498744  5Srrn; 5S ribosomal RNA [KO:K01981]
Reference
PMID:10476961
  Authors
Ban N, Nissen P, Hansen J, Capel M, Moore PB, Steitz TA.
  Title
Placement of protein and RNA structures into a 5 A-resolution map of the 50S ribosomal subunit.
  Journal
Nature 400:841-847 (1999)
DOI:10.1038/23641
Reference
PMID:10476960
  Authors
Clemons WM Jr, May JL, Wimberly BT, McCutcheon JP, Capel MS, Ramakrishnan V.
  Title
Structure of a bacterial 30S ribosomal subunit at 5.5 A resolution.
  Journal
Nature 400:833-840 (1999)
DOI:10.1038/23631
Reference
PMID:10497122
  Authors
Cate JH, Yusupov MM, Yusupova GZ, Earnest TN, Noller HF.
  Title
X-ray crystal structures of 70S ribosome functional complexes.
  Journal
Science 285:2095-2104 (1999)
DOI:10.1126/science.285.5436.2095
Reference
PMID:10937989
  Authors
Ban N, Nissen P, Hansen J, Moore PB, Steitz TA.
  Title
The complete atomic structure of the large ribosomal subunit at 2.4 A resolution.
  Journal
Science 289:905-920 (2000)
DOI:10.1126/science.289.5481.905
Reference
PMID:10937990
  Authors
Nissen P, Hansen J, Ban N, Moore PB, Steitz TA.
  Title
The structural basis of ribosome activity in peptide bond synthesis.
  Journal
Science 289:920-930 (2000)
DOI:10.1126/science.289.5481.920
Reference
PMID:11014182
  Authors
Wimberly BT, Brodersen DE, Clemons WM Jr, Morgan-Warren RJ, Carter AP, Vonrhein C, Hartsch T, Ramakrishnan V.
  Title
Structure of the 30S ribosomal subunit.
  Journal
Nature 407:327-339 (2000)
DOI:10.1038/35030006
Reference
PMID:11014183
  Authors
Carter AP, Clemons WM, Brodersen DE, Morgan-Warren RJ, Wimberly BT, Ramakrishnan V.
  Title
Functional insights from the structure of the 30S ribosomal subunit and its interactions with antibiotics.
  Journal
Nature 407:340-348 (2000)
DOI:10.1038/35030019
KO pathway
ko03010   
LinkDB

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