Entry
Name
ABC transporters - Xanthobacter autotrophicus
Description
The ATP-binding cassette (ABC) transporters form one of the largest known protein families, and are widespread in bacteria, archaea, and eukaryotes. They couple ATP hydrolysis to active transport of a wide variety of substrates such as ions, sugars, lipids, sterols, peptides, proteins, and drugs. The structure of a prokaryotic ABC transporter usually consists of three components; typically two integral membrane proteins each having six transmembrane segments, two peripheral proteins that bind and hydrolyze ATP, and a periplasmic (or lipoprotein) substrate-binding protein. Many of the genes for the three components form operons as in fact observed in many bacterial and archaeal genomes. On the other hand, in a typical eukaryotic ABC transporter, the membrane spanning protein and the ATP-binding protein are fused, forming a multi-domain protein with the membrane-spanning domain (MSD) and the nucleotide-binding domain (NBD).
Class
Environmental Information Processing; Membrane transport
BRITE hierarchy
Pathway map
Ortholog table
Other DBs
Organism
Xanthobacter autotrophicus [GN:
xau ]
Gene
Xaut_2331 sulfate ABC transporter, periplasmic sulfate-binding protein [KO:K02048 ]
Xaut_1394 sulfate ABC transporter, periplasmic sulfate-binding protein [KO:K23163 ]
Xaut_1084 ABC-type nitrate/sulfonate/bicarbonate transport system [KO:K15576 ]
Xaut_1083 binding-protein-dependent transport systems inner membrane component [KO:K15577 ]
Xaut_1211 aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein [KO:K15553 ]
Xaut_3466 aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein [KO:K15553 ]
Xaut_5064 ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein [KO:K15553 ]
Xaut_3460 ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein [KO:K15553 ]
Xaut_1529 putative substrate-binding component of ABC transporter [KO:K15553 ]
Xaut_1210 binding-protein-dependent transport systems inner membrane component [KO:K15554 ]
Xaut_3464 binding-protein-dependent transport systems inner membrane component [KO:K15554 ]
Xaut_3459 binding-protein-dependent transport systems inner membrane component [KO:K15554 ]
Xaut_5063 binding-protein-dependent transport systems inner membrane component [KO:K15554 ]
Xaut_3453 binding-protein-dependent transport systems inner membrane component [KO:K15554 ]
Xaut_1531 binding-protein-dependent transport systems inner membrane component [KO:K15554 ]
Xaut_2776 binding-protein-dependent transport systems inner membrane component [KO:K15554 ]
Xaut_2085 binding-protein-dependent transport systems inner membrane component [KO:K15554 ]
Xaut_3212 binding-protein-dependent transport systems inner membrane component [KO:K15554 ]
Xaut_3202 molybdenum ABC transporter, periplasmic molybdate-binding protein [KO:K02020 ]
Xaut_3763 binding-protein-dependent transport systems inner membrane component [KO:K02011 ]
Xaut_2942 binding-protein-dependent transport systems inner membrane component [KO:K11075 ]
Xaut_2413 periplasmic binding protein/LacI transcriptional regulator [KO:K10552 ]
Xaut_4450 binding-protein-dependent transport systems inner membrane component [KO:K05814 ]
Xaut_4451 binding-protein-dependent transport systems inner membrane component [KO:K05815 ]
Xaut_0197 phosphate ABC transporter, periplasmic phosphate-binding protein [KO:K02040 ]
Xaut_3957 phosphate ABC transporter, periplasmic phosphate-binding protein [KO:K02040 ]
Xaut_0198 phosphate ABC transporter, inner membrane subunit PstC [KO:K02037 ]
Xaut_3955 phosphate ABC transporter, inner membrane subunit PstC [KO:K02037 ]
Xaut_0199 phosphate ABC transporter, inner membrane subunit PstA [KO:K02038 ]
Xaut_3954 phosphate ABC transporter, inner membrane subunit PstA [KO:K02038 ]
Xaut_1321 phosphonate ABC transporter, periplasmic phosphonate-binding protein [KO:K02044 ]
Xaut_3962 phosphonate ABC transporter, periplasmic phosphonate-binding protein [KO:K02044 ]
Xaut_4547 binding-protein-dependent transport systems inner membrane component [KO:K09970 ]
Xaut_4548 polar amino acid ABC transporter, inner membrane subunit [KO:K09971 ]
Xaut_1864 branched-chain amino acid ABC transport system substrate-binding protein [KO:K01999 ]
Xaut_3229 putative ABC branched-chain amino transporter, periplasmic binding protein [KO:K01999 ]
Xaut_4079 ABC-type branched-chain amino acid transport system, periplasmic component [KO:K01999 ]
Xaut_1573 conserved hypothetical branched-chain amino acid ABC transporter [KO:K01999 ]
Xaut_1298 putative ABC branched-chain amino transporter, periplasmic binding protein [KO:K01999 ]
Xaut_1144 binding-protein-dependent transport systems inner membrane component [KO:K02072 ]
Xaut_4149 putative urea short-chain amide or branched-chain amino acid uptake ABC transporter [KO:K11959 ]
Xaut_2634 binding-protein-dependent transport systems inner membrane component [KO:K13894 ]
Xaut_2635 binding-protein-dependent transport systems inner membrane component [KO:K13895 ]
Xaut_4462 lipoprotein releasing system, transmembrane protein, LolC/E family [KO:K09808 ]
Xaut_2459 ABC transporter CydDC cysteine exporter (CydDC-E) family permease/ATP-binding protein CydC [KO:K16012 ]
Xaut_2458 ABC transporter CydDC cysteine exporter (CydDC-E) family permease/ATP-binding protein CydD [KO:K16013 ]
Compound
C00093 sn-Glycerol 3-phosphate
C01153 Orthophosphoric monoester
C01181 4-Trimethylammoniobutanoate
C01279 4-Amino-5-hydroxymethyl-2-methylpyrimidine
C03557 2-Aminoethylphosphonate
C03611 Galactose oligosaccharide
C03619 Methyl beta-D-galactoside
C04114 (E)-4-(Trimethylammonio)but-2-enoate
C06705 Capsular polysaccharide
C19872 N-Formyl-4-amino-5-aminomethyl-2-methylpyrimidine
C20570 alpha-1,5-L-Arabinobiose
C20571 alpha-1,5-L-Arabinotriose
C20572 alpha-1,5-L-Arabinotetraose
Reference
Authors
Tomii K, Kanehisa M.
Title
A comparative analysis of ABC transporters in complete microbial genomes.
Journal
Reference
Authors
Sperandeo P, Lau FK, Carpentieri A, De Castro C, Molinaro A, Deho G, Silhavy TJ, Polissi A
Title
Functional analysis of the protein machinery required for transport of lipopolysaccharide to the outer membrane of Escherichia coli.
Journal
Reference
Authors
Ruiz N, Gronenberg LS, Kahne D, Silhavy TJ
Title
Identification of two inner-membrane proteins required for the transport of lipopolysaccharide to the outer membrane of Escherichia coli.
Journal
Reference
Authors
Omata T, Price GD, Badger MR, Okamura M, Gohta S, Ogawa T
Title
Identification of an ATP-binding cassette transporter involved in bicarbonate uptake in the cyanobacterium Synechococcus sp. strain PCC 7942.
Journal
Reference
Authors
Quintero MJ, Montesinos ML, Herrero A, Flores E
Title
Identification of genes encoding amino acid permeases by inactivation of selected ORFs from the Synechocystis genomic sequence.
Journal
Reference
Authors
Picossi S, Montesinos ML, Pernil R, Lichtle C, Herrero A, Flores E
Title
ABC-type neutral amino acid permease N-I is required for optimal diazotrophic growth and is repressed in the heterocysts of Anabaena sp. strain PCC 7120.
Journal
Reference
Authors
Valladares A, Montesinos ML, Herrero A, Flores E.
Title
An ABC-type, high-affinity urea permease identified in cyanobacteria.
Journal
Reference
Authors
Richard-Fogal CL, Frawley ER, Kranz RG
Title
Topology and function of CcmD in cytochrome c maturation.
Journal
Reference
Authors
Suzuki H, Koyanagi T, Izuka S, Onishi A, Kumagai H
Title
The yliA, -B, -C, and -D genes of Escherichia coli K-12 encode a novel glutathione importer with an ATP-binding cassette.
Journal
Reference
Authors
Novikova M, Metlitskaya A, Datsenko K, Kazakov T, Kazakov A, Wanner B, Severinov K
Title
The Escherichia coli Yej transporter is required for the uptake of translation inhibitor microcin C.
Journal
Reference
Authors
Tikhonova EB, Devroy VK, Lau SY, Zgurskaya HI
Title
Reconstitution of the Escherichia coli macrolide transporter: the periplasmic membrane fusion protein MacA stimulates the ATPase activity of MacB.
Journal
Reference
Authors
Yamanaka H, Kobayashi H, Takahashi E, Okamoto K
Title
MacAB is involved in the secretion of Escherichia coli heat-stable enterotoxin II.
Journal
KO pathway
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