KEGG   PATHWAY: xbo01100
Entry
xbo01100                    Pathway                                
Name
Metabolic pathways - Xenorhabdus bovienii SS-2004
Class
Pathway map
xbo01100  Metabolic pathways
xbo01100

Module
xbo_M00002  Glycolysis, core module involving three-carbon compounds [PATH:xbo01100]
xbo_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:xbo01100]
xbo_M00004  Pentose phosphate pathway (Pentose phosphate cycle) [PATH:xbo01100]
xbo_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:xbo01100]
xbo_M00006  Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:xbo01100]
xbo_M00007  Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:xbo01100]
xbo_M00009  Citrate cycle (TCA cycle, Krebs cycle) [PATH:xbo01100]
xbo_M00010  Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:xbo01100]
xbo_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:xbo01100]
xbo_M00012  Glyoxylate cycle [PATH:xbo01100]
xbo_M00015  Proline biosynthesis, glutamate => proline [PATH:xbo01100]
xbo_M00017  Methionine biosynthesis, aspartate => homoserine => methionine [PATH:xbo01100]
xbo_M00018  Threonine biosynthesis, aspartate => homoserine => threonine [PATH:xbo01100]
xbo_M00019  Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:xbo01100]
xbo_M00020  Serine biosynthesis, glycerate-3P => serine [PATH:xbo01100]
xbo_M00021  Cysteine biosynthesis, serine => cysteine [PATH:xbo01100]
xbo_M00022  Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:xbo01100]
xbo_M00023  Tryptophan biosynthesis, chorismate => tryptophan [PATH:xbo01100]
xbo_M00024  Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine [PATH:xbo01100]
xbo_M00025  Tyrosine biosynthesis, chorismate => HPP => tyrosine [PATH:xbo01100]
xbo_M00026  Histidine biosynthesis, PRPP => histidine [PATH:xbo01100]
xbo_M00045  Histidine degradation, histidine => N-formiminoglutamate => glutamate [PATH:xbo01100]
xbo_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:xbo01100]
xbo_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:xbo01100]
xbo_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:xbo01100]
xbo_M00051  De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP [PATH:xbo01100]
xbo_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:xbo01100]
xbo_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:xbo01100]
xbo_M00060  KDO2-lipid A biosynthesis, Raetz pathway, LpxL-LpxM type [PATH:xbo01100]
xbo_M00063  CMP-KDO biosynthesis [PATH:xbo01100]
xbo_M00064  ADP-L-glycero-D-manno-heptose biosynthesis [PATH:xbo01100]
xbo_M00082  Fatty acid biosynthesis, initiation [PATH:xbo01100]
xbo_M00083  Fatty acid biosynthesis, elongation [PATH:xbo01100]
xbo_M00086  beta-Oxidation, acyl-CoA synthesis [PATH:xbo01100]
xbo_M00087  beta-Oxidation [PATH:xbo01100]
xbo_M00093  Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:xbo01100]
xbo_M00117  Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH:xbo01100]
xbo_M00118  Glutathione biosynthesis, glutamate => glutathione [PATH:xbo01100]
xbo_M00119  Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH:xbo01100]
xbo_M00120  Coenzyme A biosynthesis, pantothenate => CoA [PATH:xbo01100]
xbo_M00121  Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:xbo01100]
xbo_M00123  Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:xbo01100]
xbo_M00124  Pyridoxal-P biosynthesis, erythrose-4P => pyridoxal-P [PATH:xbo01100]
xbo_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:xbo01100]
xbo_M00126  Tetrahydrofolate biosynthesis, GTP => THF [PATH:xbo01100]
xbo_M00127  Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP [PATH:xbo01100]
xbo_M00144  NADH:quinone oxidoreductase, prokaryotes [PATH:xbo01100]
xbo_M00149  Succinate dehydrogenase, prokaryotes [PATH:xbo01100]
xbo_M00150  Fumarate reductase, prokaryotes [PATH:xbo01100]
xbo_M00157  F-type ATPase, prokaryotes and chloroplasts [PATH:xbo01100]
xbo_M00168  CAM (Crassulacean acid metabolism), dark [PATH:xbo01100]
xbo_M00176  Assimilatory sulfate reduction, sulfate => H2S [PATH:xbo01100]
xbo_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:xbo01100]
xbo_M00338  Cysteine biosynthesis, homocysteine + serine => cysteine [PATH:xbo01100]
xbo_M00417  Cytochrome o ubiquinol oxidase [PATH:xbo01100]
xbo_M00432  Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:xbo01100]
xbo_M00533  Homoprotocatechuate degradation, homoprotocatechuate => 2-oxohept-3-enedioate [PATH:xbo01100]
xbo_M00555  Betaine biosynthesis, choline => betaine [PATH:xbo01100]
xbo_M00570  Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:xbo01100]
xbo_M00572  Pimeloyl-ACP biosynthesis, BioC-BioH pathway, malonyl-ACP => pimeloyl-ACP [PATH:xbo01100]
xbo_M00579  Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate [PATH:xbo01100]
xbo_M00621  Glycine cleavage system [PATH:xbo01100]
xbo_M00761  Undecaprenylphosphate alpha-L-Ara4N biosynthesis, UDP-GlcA => undecaprenyl phosphate alpha-L-Ara4N [PATH:xbo01100]
xbo_M00844  Arginine biosynthesis, ornithine => arginine [PATH:xbo01100]
xbo_M00846  Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH:xbo01100]
xbo_M00855  Glycogen degradation, glycogen => glucose-6P [PATH:xbo01100]
xbo_M00878  Phenylacetate degradation, phenylaxetate => acetyl-CoA/succinyl-CoA [PATH:xbo01100]
xbo_M00879  Arginine succinyltransferase pathway, arginine => glutamate [PATH:xbo01100]
xbo_M00880  Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:xbo01100]
xbo_M00881  Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:xbo01100]
xbo_M00924  Cobalamin biosynthesis, anaerobic, uroporphyrinogen III => sirohydrochlorin => cobyrinate a,c-diamide [PATH:xbo01100]
xbo_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:xbo01100]
xbo_M00970  Proline degradation, proline => glutamate [PATH:xbo01100]
Organism
Xenorhabdus bovienii SS-2004 [GN:xbo]
Related
pathway
xbo00010  Glycolysis / Gluconeogenesis
xbo00020  Citrate cycle (TCA cycle)
xbo00030  Pentose phosphate pathway
xbo00040  Pentose and glucuronate interconversions
xbo00051  Fructose and mannose metabolism
xbo00052  Galactose metabolism
xbo00053  Ascorbate and aldarate metabolism
xbo00061  Fatty acid biosynthesis
xbo00071  Fatty acid degradation
xbo00074  Mycolic acid biosynthesis
xbo00130  Ubiquinone and other terpenoid-quinone biosynthesis
xbo00190  Oxidative phosphorylation
xbo00220  Arginine biosynthesis
xbo00230  Purine metabolism
xbo00240  Pyrimidine metabolism
xbo00250  Alanine, aspartate and glutamate metabolism
xbo00260  Glycine, serine and threonine metabolism
xbo00261  Monobactam biosynthesis
xbo00270  Cysteine and methionine metabolism
xbo00280  Valine, leucine and isoleucine degradation
xbo00290  Valine, leucine and isoleucine biosynthesis
xbo00300  Lysine biosynthesis
xbo00310  Lysine degradation
xbo00330  Arginine and proline metabolism
xbo00332  Carbapenem biosynthesis
xbo00340  Histidine metabolism
xbo00350  Tyrosine metabolism
xbo00360  Phenylalanine metabolism
xbo00362  Benzoate degradation
xbo00380  Tryptophan metabolism
xbo00400  Phenylalanine, tyrosine and tryptophan biosynthesis
xbo00401  Novobiocin biosynthesis
xbo00410  beta-Alanine metabolism
xbo00430  Taurine and hypotaurine metabolism
xbo00450  Selenocompound metabolism
xbo00460  Cyanoamino acid metabolism
xbo00470  D-Amino acid metabolism
xbo00480  Glutathione metabolism
xbo00500  Starch and sucrose metabolism
xbo00511  Other glycan degradation
xbo00520  Amino sugar and nucleotide sugar metabolism
xbo00521  Streptomycin biosynthesis
xbo00523  Polyketide sugar unit biosynthesis
xbo00525  Acarbose and validamycin biosynthesis
xbo00540  Lipopolysaccharide biosynthesis
xbo00541  O-Antigen nucleotide sugar biosynthesis
xbo00542  O-Antigen repeat unit biosynthesis
xbo00543  Exopolysaccharide biosynthesis
xbo00550  Peptidoglycan biosynthesis
xbo00552  Teichoic acid biosynthesis
xbo00561  Glycerolipid metabolism
xbo00562  Inositol phosphate metabolism
xbo00564  Glycerophospholipid metabolism
xbo00592  alpha-Linolenic acid metabolism
xbo00600  Sphingolipid metabolism
xbo00620  Pyruvate metabolism
xbo00625  Chloroalkane and chloroalkene degradation
xbo00626  Naphthalene degradation
xbo00627  Aminobenzoate degradation
xbo00630  Glyoxylate and dicarboxylate metabolism
xbo00640  Propanoate metabolism
xbo00650  Butanoate metabolism
xbo00660  C5-Branched dibasic acid metabolism
xbo00670  One carbon pool by folate
xbo00680  Methane metabolism
xbo00710  Carbon fixation by Calvin cycle
xbo00720  Other carbon fixation pathways
xbo00730  Thiamine metabolism
xbo00740  Riboflavin metabolism
xbo00750  Vitamin B6 metabolism
xbo00760  Nicotinate and nicotinamide metabolism
xbo00770  Pantothenate and CoA biosynthesis
xbo00780  Biotin metabolism
xbo00785  Lipoic acid metabolism
xbo00790  Folate biosynthesis
xbo00860  Porphyrin metabolism
xbo00900  Terpenoid backbone biosynthesis
xbo00907  Pinene, camphor and geraniol degradation
xbo00910  Nitrogen metabolism
xbo00920  Sulfur metabolism
xbo00930  Caprolactam degradation
xbo00997  Biosynthesis of various other secondary metabolites
xbo00999  Biosynthesis of various plant secondary metabolites
xbo01040  Biosynthesis of unsaturated fatty acids
xbo01053  Biosynthesis of siderophore group nonribosomal peptides
KO pathway
ko01100   
LinkDB

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