KEGG   PATHWAY: xbo00010
Entry
xbo00010                    Pathway                                
Name
Glycolysis / Gluconeogenesis - Xenorhabdus bovienii SS-2004
Description
Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which sometimes contains operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].
Class
Metabolism; Carbohydrate metabolism
Pathway map
xbo00010  Glycolysis / Gluconeogenesis
xbo00010

Module
xbo_M00002  Glycolysis, core module involving three-carbon compounds [PATH:xbo00010]
xbo_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:xbo00010]
xbo_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:xbo00010]
Other DBs
GO: 0006096 0006094
Organism
Xenorhabdus bovienii SS-2004 [GN:xbo]
Gene
XBJ1_4002  pgi; glucosephosphate isomerase [KO:K01810] [EC:5.3.1.9]
XBJ1_4302  pfkA; 6-phosphofructokinase I [KO:K00850] [EC:2.7.1.11]
XBJ1_0346  fbp; fructose-bisphosphatase [KO:K03841] [EC:3.1.3.11]
XBJ1_3083  fbaA; fructose-bisphosphate aldolase, class II [KO:K01624] [EC:4.1.2.13]
XBJ1_4297  tpiA; triosephosphate isomerase [KO:K01803] [EC:5.3.1.1]
XBJ1_2452  gapA; glyceraldehyde-3-phosphate dehydrogenase A [KO:K00134] [EC:1.2.1.12]
XBJ1_3082  pgk; phosphoglycerate kinase [KO:K00927] [EC:2.7.2.3]
XBJ1_1038  gpmA; phosphoglyceromutase 1 [KO:K01834] [EC:5.4.2.11]
XBJ1_3521  ytjC; putative phosphoglyceromutase 2 [KO:K15634] [EC:5.4.2.11]
XBJ1_3651  eno; enolase [KO:K01689] [EC:4.2.1.11]
XBJ1_2503  pykF; pyruvate kinase I (formerly F), fructose-stimulated [KO:K00873] [EC:2.7.1.40]
XBJ1_2231  pykA; pyruvate kinase II, glucose-stimulated [KO:K00873] [EC:2.7.1.40]
XBJ1_2510  pps; phosphoenolpyruvate synthase [KO:K01007] [EC:2.7.9.2]
XBJ1_3455  aceE; pyruvate dehydrogenase, decarboxylase subunit, thiamin-binding [KO:K00163] [EC:1.2.4.1]
XBJ1_3454  aceF; pyruvate dehydrogenase, dihydrolipoyltransacetylase subunit [KO:K00627] [EC:2.3.1.12]
XBJ1_3453  lpd; dihydrolipoamide dehydrogenase, FAD/NAD(P)-binding, component of the 2-oxoglutarate dehydrogenase and the pyruvate dehydrogenase complexes [KO:K00382] [EC:1.8.1.4]
XBJ1_3896  adhC; alcohol dehydrogenase class III [KO:K00121] [EC:1.1.1.284 1.1.1.1]
XBJ1_2430  adhE; multifunctional: acetaldehyde-CoA dehydrogenase (N-terminal); iron-dependent alcohol dehydrogenase (C-terminal); pyruvate-formate lyase deactivase [KO:K04072] [EC:1.2.1.10 1.1.1.1]
XBJ1_0925  yiaY; putative alcohol dehydrogenase with dehydroquinate synthase-like domain [KO:K13954] [EC:1.1.1.1]
XBJ1_3649  aldB; aldehyde dehydrogenase B (lactaldehyde dehydrogenase) [KO:K00128] [EC:1.2.1.3]
XBJ1_0050  acs; acetyl-CoA synthetase, has propionyl-CoA synthetase activity [KO:K01895] [EC:6.2.1.1]
XBJ1_0225  yihX; putative enzyme with a phosphatase-like domain [KO:K20866] [EC:3.1.3.10]
XBJ1_1074  pgm; phosphoglucomutase [KO:K01835] [EC:5.4.2.2]
XBJ1_2453  conserved hypothetical protein [KO:K01792] [EC:5.1.3.15]
XBJ1_0071  pck; phosphoenolpyruvate carboxykinase [KO:K01610] [EC:4.1.1.49]
XBJ1_3726  chbF; phospho-beta-glucosidase, NAD(P)-binding (cellobiose-6-phosphate hydrolase) [KO:K01222] [EC:3.2.1.86]
XBJ1_3127  crr; PTS family enzyme IIA component [KO:K02777] [EC:2.7.1.-]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00031  D-Glucose
C00033  Acetate
C00036  Oxaloacetate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00084  Acetaldehyde
C00085  D-Fructose 6-phosphate
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00186  (S)-Lactate
C00197  3-Phospho-D-glycerate
C00221  beta-D-Glucose
C00236  3-Phospho-D-glyceroyl phosphate
C00267  alpha-D-Glucose
C00354  D-Fructose 1,6-bisphosphate
C00469  Ethanol
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C01159  2,3-Bisphospho-D-glycerate
C01172  beta-D-Glucose 6-phosphate
C01451  Salicin
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C06186  Arbutin
C06187  Arbutin 6-phosphate
C06188  Salicin 6-phosphate
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
xbo00020  Citrate cycle (TCA cycle)
xbo00030  Pentose phosphate pathway
xbo00500  Starch and sucrose metabolism
xbo00620  Pyruvate metabolism
xbo00640  Propanoate metabolism
KO pathway
ko00010   
LinkDB

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