PATHWAY: yal01100 Help Entry yal01100                    Pathway                                 Name Metabolic pathways - Yersinia aldovae Class BRITE hierarchy Pathway map yal01100   Metabolic pathways Module yal_M00001   Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:yal01100] yal_M00002   Glycolysis, core module involving three-carbon compounds [PATH:yal01100] yal_M00003   Gluconeogenesis, oxaloacetate => fructose-6P [PATH:yal01100] yal_M00004   Pentose phosphate pathway (Pentose phosphate cycle) [PATH:yal01100] yal_M00005   PRPP biosynthesis, ribose 5P => PRPP [PATH:yal01100] yal_M00006   Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:yal01100] yal_M00007   Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:yal01100] yal_M00009   Citrate cycle (TCA cycle, Krebs cycle) [PATH:yal01100] yal_M00010   Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:yal01100] yal_M00011   Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:yal01100] yal_M00012   Glyoxylate cycle [PATH:yal01100] yal_M00015   Proline biosynthesis, glutamate => proline [PATH:yal01100] yal_M00016   Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:yal01100] yal_M00017   Methionine biosynthesis, aspartate => homoserine => methionine [PATH:yal01100] yal_M00018   Threonine biosynthesis, aspartate => homoserine => threonine [PATH:yal01100] yal_M00019   Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:yal01100] yal_M00020   Serine biosynthesis, glycerate-3P => serine [PATH:yal01100] yal_M00021   Cysteine biosynthesis, serine => cysteine [PATH:yal01100] yal_M00022   Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:yal01100] yal_M00023   Tryptophan biosynthesis, chorismate => tryptophan [PATH:yal01100] yal_M00024   Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine [PATH:yal01100] yal_M00025   Tyrosine biosynthesis, chorismate => HPP => tyrosine [PATH:yal01100] yal_M00026   Histidine biosynthesis, PRPP => histidine [PATH:yal01100] yal_M00028   Ornithine biosynthesis, glutamate => ornithine [PATH:yal01100] yal_M00034   Methionine salvage pathway [PATH:yal01100] yal_M00045   Histidine degradation, histidine => N-formiminoglutamate => glutamate [PATH:yal01100] yal_M00048   De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:yal01100] yal_M00049   Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:yal01100] yal_M00050   Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:yal01100] yal_M00051   De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP [PATH:yal01100] yal_M00052   Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:yal01100] yal_M00053   Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:yal01100] yal_M00060   KDO2-lipid A biosynthesis, Raetz pathway, LpxL-LpxM type [PATH:yal01100] yal_M00061   D-Glucuronate degradation, D-glucuronate => pyruvate + D-glyceraldehyde 3P [PATH:yal01100] yal_M00063   CMP-KDO biosynthesis [PATH:yal01100] yal_M00064   ADP-L-glycero-D-manno-heptose biosynthesis [PATH:yal01100] yal_M00082   Fatty acid biosynthesis, initiation [PATH:yal01100] yal_M00083   Fatty acid biosynthesis, elongation [PATH:yal01100] yal_M00086   beta-Oxidation, acyl-CoA synthesis [PATH:yal01100] yal_M00087   beta-Oxidation [PATH:yal01100] yal_M00093   Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:yal01100] yal_M00115   NAD biosynthesis, aspartate => quinolinate => NAD [PATH:yal01100] yal_M00116   Menaquinone biosynthesis, chorismate (+ polyprenyl-PP) => menaquinol [PATH:yal01100] yal_M00117   Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH:yal01100] yal_M00118   Glutathione biosynthesis, glutamate => glutathione [PATH:yal01100] yal_M00119   Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH:yal01100] yal_M00120   Coenzyme A biosynthesis, pantothenate => CoA [PATH:yal01100] yal_M00121   Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:yal01100] yal_M00122   Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH:yal01100] yal_M00123   Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:yal01100] yal_M00124   Pyridoxal-P biosynthesis, erythrose-4P => pyridoxal-P [PATH:yal01100] yal_M00125   Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:yal01100] yal_M00126   Tetrahydrofolate biosynthesis, GTP => THF [PATH:yal01100] yal_M00127   Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP [PATH:yal01100] yal_M00140   C1-unit interconversion, prokaryotes [PATH:yal01100] yal_M00144   NADH:quinone oxidoreductase, prokaryotes [PATH:yal01100] yal_M00149   Succinate dehydrogenase, prokaryotes [PATH:yal01100] yal_M00150   Fumarate reductase, prokaryotes [PATH:yal01100] yal_M00157   F-type ATPase, prokaryotes and chloroplasts [PATH:yal01100] yal_M00168   CAM (Crassulacean acid metabolism), dark [PATH:yal01100] yal_M00176   Assimilatory sulfate reduction, sulfate => H2S [PATH:yal01100] yal_M00307   Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:yal01100] yal_M00338   Cysteine biosynthesis, homocysteine + serine => cysteine [PATH:yal01100] yal_M00417   Cytochrome o ubiquinol oxidase [PATH:yal01100] yal_M00432   Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:yal01100] yal_M00530   Dissimilatory nitrate reduction, nitrate => ammonia [PATH:yal01100] yal_M00549   Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:yal01100] yal_M00554   Nucleotide sugar biosynthesis, galactose => UDP-galactose [PATH:yal01100] yal_M00570   Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:yal01100] yal_M00579   Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate [PATH:yal01100] yal_M00621   Glycine cleavage system [PATH:yal01100] yal_M00631   D-Galacturonate degradation (bacteria), D-galacturonate => pyruvate + D-glyceraldehyde 3P [PATH:yal01100] yal_M00632   Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P [PATH:yal01100] yal_M00761   Undecaprenylphosphate alpha-L-Ara4N biosynthesis, UDP-GlcA => undecaprenyl phosphate alpha-L-Ara4N [PATH:yal01100] yal_M00844   Arginine biosynthesis, ornithine => arginine [PATH:yal01100] yal_M00846   Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH:yal01100] yal_M00854   Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:yal01100] yal_M00879   Arginine succinyltransferase pathway, arginine => glutamate [PATH:yal01100] yal_M00880   Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:yal01100] yal_M00881   Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:yal01100] yal_M00899   Thiamine salvage pathway, HMP/HET => TMP [PATH:yal01100] yal_M00909   UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:yal01100] yal_M00924   Cobalamin biosynthesis, anaerobic, uroporphyrinogen III => sirohydrochlorin => cobyrinate a,c-diamide [PATH:yal01100] yal_M00938   Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:yal01100] yal_M00970   Proline degradation, proline => glutamate [PATH:yal01100] Organism Yersinia aldovae [GN:yal] Related pathway yal00010   Glycolysis / Gluconeogenesis yal00020   Citrate cycle (TCA cycle) yal00030   Pentose phosphate pathway yal00040   Pentose and glucuronate interconversions yal00051   Fructose and mannose metabolism yal00052   Galactose metabolism yal00053   Ascorbate and aldarate metabolism yal00061   Fatty acid biosynthesis yal00071   Fatty acid degradation yal00074   Mycolic acid biosynthesis yal00130   Ubiquinone and other terpenoid-quinone biosynthesis yal00190   Oxidative phosphorylation yal00220   Arginine biosynthesis yal00230   Purine metabolism yal00240   Pyrimidine metabolism yal00250   Alanine, aspartate and glutamate metabolism yal00260   Glycine, serine and threonine metabolism yal00261   Monobactam biosynthesis yal00270   Cysteine and methionine metabolism yal00280   Valine, leucine and isoleucine degradation yal00290   Valine, leucine and isoleucine biosynthesis yal00300   Lysine biosynthesis yal00310   Lysine degradation yal00330   Arginine and proline metabolism yal00332   Carbapenem biosynthesis yal00340   Histidine metabolism yal00350   Tyrosine metabolism yal00360   Phenylalanine metabolism yal00361   Chlorocyclohexane and chlorobenzene degradation yal00362   Benzoate degradation yal00364   Fluorobenzoate degradation yal00380   Tryptophan metabolism yal00400   Phenylalanine, tyrosine and tryptophan biosynthesis yal00401   Novobiocin biosynthesis yal00410   beta-Alanine metabolism yal00430   Taurine and hypotaurine metabolism yal00440   Phosphonate and phosphinate metabolism yal00450   Selenocompound metabolism yal00460   Cyanoamino acid metabolism yal00470   D-Amino acid metabolism yal00480   Glutathione metabolism yal00500   Starch and sucrose metabolism yal00511   Other glycan degradation yal00520   Amino sugar and nucleotide sugar metabolism yal00521   Streptomycin biosynthesis yal00523   Polyketide sugar unit biosynthesis yal00525   Acarbose and validamycin biosynthesis yal00540   Lipopolysaccharide biosynthesis yal00541   O-Antigen nucleotide sugar biosynthesis yal00542   O-Antigen repeat unit biosynthesis yal00543   Exopolysaccharide biosynthesis yal00550   Peptidoglycan biosynthesis yal00552   Teichoic acid biosynthesis yal00561   Glycerolipid metabolism yal00562   Inositol phosphate metabolism yal00564   Glycerophospholipid metabolism yal00565   Ether lipid metabolism yal00592   alpha-Linolenic acid metabolism yal00600   Sphingolipid metabolism yal00620   Pyruvate metabolism yal00623   Toluene degradation yal00625   Chloroalkane and chloroalkene degradation yal00626   Naphthalene degradation yal00627   Aminobenzoate degradation yal00630   Glyoxylate and dicarboxylate metabolism yal00633   Nitrotoluene degradation yal00640   Propanoate metabolism yal00650   Butanoate metabolism yal00660   C5-Branched dibasic acid metabolism yal00670   One carbon pool by folate yal00680   Methane metabolism yal00710   Carbon fixation by Calvin cycle yal00720   Other carbon fixation pathways yal00730   Thiamine metabolism yal00740   Riboflavin metabolism yal00750   Vitamin B6 metabolism yal00760   Nicotinate and nicotinamide metabolism yal00770   Pantothenate and CoA biosynthesis yal00780   Biotin metabolism yal00785   Lipoic acid metabolism yal00790   Folate biosynthesis yal00860   Porphyrin metabolism yal00900   Terpenoid backbone biosynthesis yal00907   Pinene, camphor and geraniol degradation yal00910   Nitrogen metabolism yal00920   Sulfur metabolism yal00930   Caprolactam degradation yal00999   Biosynthesis of various plant secondary metabolites yal01040   Biosynthesis of unsaturated fatty acids yal01053   Biosynthesis of siderophore group nonribosomal peptides KO pathway ko01100     LinkDB All DBs

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