KEGG   PATHWAY: ykr01100
Entry
ykr01100                    Pathway                                
Name
Metabolic pathways - Yersinia rochesterensis
Class
Pathway map
ykr01100  Metabolic pathways
ykr01100

Module
ykr_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:ykr01100]
ykr_M00002  Glycolysis, core module involving three-carbon compounds [PATH:ykr01100]
ykr_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:ykr01100]
ykr_M00004  Pentose phosphate pathway (Pentose phosphate cycle) [PATH:ykr01100]
ykr_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:ykr01100]
ykr_M00006  Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:ykr01100]
ykr_M00007  Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:ykr01100]
ykr_M00008  Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:ykr01100]
ykr_M00009  Citrate cycle (TCA cycle, Krebs cycle) [PATH:ykr01100]
ykr_M00010  Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:ykr01100]
ykr_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:ykr01100]
ykr_M00012  Glyoxylate cycle [PATH:ykr01100]
ykr_M00015  Proline biosynthesis, glutamate => proline [PATH:ykr01100]
ykr_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:ykr01100]
ykr_M00017  Methionine biosynthesis, aspartate => homoserine => methionine [PATH:ykr01100]
ykr_M00018  Threonine biosynthesis, aspartate => homoserine => threonine [PATH:ykr01100]
ykr_M00019  Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:ykr01100]
ykr_M00020  Serine biosynthesis, glycerate-3P => serine [PATH:ykr01100]
ykr_M00021  Cysteine biosynthesis, serine => cysteine [PATH:ykr01100]
ykr_M00022  Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:ykr01100]
ykr_M00023  Tryptophan biosynthesis, chorismate => tryptophan [PATH:ykr01100]
ykr_M00024  Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine [PATH:ykr01100]
ykr_M00025  Tyrosine biosynthesis, chorismate => HPP => tyrosine [PATH:ykr01100]
ykr_M00026  Histidine biosynthesis, PRPP => histidine [PATH:ykr01100]
ykr_M00028  Ornithine biosynthesis, glutamate => ornithine [PATH:ykr01100]
ykr_M00034  Methionine salvage pathway [PATH:ykr01100]
ykr_M00045  Histidine degradation, histidine => N-formiminoglutamate => glutamate [PATH:ykr01100]
ykr_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:ykr01100]
ykr_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:ykr01100]
ykr_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:ykr01100]
ykr_M00051  De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP [PATH:ykr01100]
ykr_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:ykr01100]
ykr_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:ykr01100]
ykr_M00060  KDO2-lipid A biosynthesis, Raetz pathway, LpxL-LpxM type [PATH:ykr01100]
ykr_M00061  D-Glucuronate degradation, D-glucuronate => pyruvate + D-glyceraldehyde 3P [PATH:ykr01100]
ykr_M00063  CMP-KDO biosynthesis [PATH:ykr01100]
ykr_M00064  ADP-L-glycero-D-manno-heptose biosynthesis [PATH:ykr01100]
ykr_M00082  Fatty acid biosynthesis, initiation [PATH:ykr01100]
ykr_M00083  Fatty acid biosynthesis, elongation [PATH:ykr01100]
ykr_M00086  beta-Oxidation, acyl-CoA synthesis [PATH:ykr01100]
ykr_M00087  beta-Oxidation [PATH:ykr01100]
ykr_M00093  Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:ykr01100]
ykr_M00115  NAD biosynthesis, aspartate => quinolinate => NAD [PATH:ykr01100]
ykr_M00116  Menaquinone biosynthesis, chorismate (+ polyprenyl-PP) => menaquinol [PATH:ykr01100]
ykr_M00117  Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH:ykr01100]
ykr_M00118  Glutathione biosynthesis, glutamate => glutathione [PATH:ykr01100]
ykr_M00119  Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH:ykr01100]
ykr_M00120  Coenzyme A biosynthesis, pantothenate => CoA [PATH:ykr01100]
ykr_M00121  Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:ykr01100]
ykr_M00122  Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH:ykr01100]
ykr_M00123  Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:ykr01100]
ykr_M00124  Pyridoxal-P biosynthesis, erythrose-4P => pyridoxal-P [PATH:ykr01100]
ykr_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:ykr01100]
ykr_M00126  Tetrahydrofolate biosynthesis, GTP => THF [PATH:ykr01100]
ykr_M00127  Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP [PATH:ykr01100]
ykr_M00140  C1-unit interconversion, prokaryotes [PATH:ykr01100]
ykr_M00144  NADH:quinone oxidoreductase, prokaryotes [PATH:ykr01100]
ykr_M00149  Succinate dehydrogenase, prokaryotes [PATH:ykr01100]
ykr_M00150  Fumarate reductase, prokaryotes [PATH:ykr01100]
ykr_M00157  F-type ATPase, prokaryotes and chloroplasts [PATH:ykr01100]
ykr_M00168  CAM (Crassulacean acid metabolism), dark [PATH:ykr01100]
ykr_M00176  Assimilatory sulfate reduction, sulfate => H2S [PATH:ykr01100]
ykr_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:ykr01100]
ykr_M00338  Cysteine biosynthesis, homocysteine + serine => cysteine [PATH:ykr01100]
ykr_M00417  Cytochrome o ubiquinol oxidase [PATH:ykr01100]
ykr_M00432  Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:ykr01100]
ykr_M00530  Dissimilatory nitrate reduction, nitrate => ammonia [PATH:ykr01100]
ykr_M00549  Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:ykr01100]
ykr_M00554  Nucleotide sugar biosynthesis, galactose => UDP-galactose [PATH:ykr01100]
ykr_M00570  Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:ykr01100]
ykr_M00579  Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate [PATH:ykr01100]
ykr_M00621  Glycine cleavage system [PATH:ykr01100]
ykr_M00631  D-Galacturonate degradation (bacteria), D-galacturonate => pyruvate + D-glyceraldehyde 3P [PATH:ykr01100]
ykr_M00632  Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P [PATH:ykr01100]
ykr_M00761  Undecaprenylphosphate alpha-L-Ara4N biosynthesis, UDP-GlcA => undecaprenyl phosphate alpha-L-Ara4N [PATH:ykr01100]
ykr_M00844  Arginine biosynthesis, ornithine => arginine [PATH:ykr01100]
ykr_M00846  Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH:ykr01100]
ykr_M00854  Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:ykr01100]
ykr_M00855  Glycogen degradation, glycogen => glucose-6P [PATH:ykr01100]
ykr_M00879  Arginine succinyltransferase pathway, arginine => glutamate [PATH:ykr01100]
ykr_M00880  Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:ykr01100]
ykr_M00881  Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:ykr01100]
ykr_M00909  UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:ykr01100]
ykr_M00924  Cobalamin biosynthesis, anaerobic, uroporphyrinogen III => sirohydrochlorin => cobyrinate a,c-diamide [PATH:ykr01100]
ykr_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:ykr01100]
ykr_M00970  Proline degradation, proline => glutamate [PATH:ykr01100]
Organism
Yersinia rochesterensis [GN:ykr]
Related
pathway
ykr00010  Glycolysis / Gluconeogenesis
ykr00020  Citrate cycle (TCA cycle)
ykr00030  Pentose phosphate pathway
ykr00040  Pentose and glucuronate interconversions
ykr00051  Fructose and mannose metabolism
ykr00052  Galactose metabolism
ykr00053  Ascorbate and aldarate metabolism
ykr00061  Fatty acid biosynthesis
ykr00071  Fatty acid degradation
ykr00074  Mycolic acid biosynthesis
ykr00130  Ubiquinone and other terpenoid-quinone biosynthesis
ykr00190  Oxidative phosphorylation
ykr00220  Arginine biosynthesis
ykr00230  Purine metabolism
ykr00240  Pyrimidine metabolism
ykr00250  Alanine, aspartate and glutamate metabolism
ykr00260  Glycine, serine and threonine metabolism
ykr00261  Monobactam biosynthesis
ykr00270  Cysteine and methionine metabolism
ykr00280  Valine, leucine and isoleucine degradation
ykr00290  Valine, leucine and isoleucine biosynthesis
ykr00300  Lysine biosynthesis
ykr00310  Lysine degradation
ykr00330  Arginine and proline metabolism
ykr00332  Carbapenem biosynthesis
ykr00340  Histidine metabolism
ykr00350  Tyrosine metabolism
ykr00360  Phenylalanine metabolism
ykr00361  Chlorocyclohexane and chlorobenzene degradation
ykr00362  Benzoate degradation
ykr00364  Fluorobenzoate degradation
ykr00380  Tryptophan metabolism
ykr00400  Phenylalanine, tyrosine and tryptophan biosynthesis
ykr00401  Novobiocin biosynthesis
ykr00410  beta-Alanine metabolism
ykr00430  Taurine and hypotaurine metabolism
ykr00440  Phosphonate and phosphinate metabolism
ykr00450  Selenocompound metabolism
ykr00460  Cyanoamino acid metabolism
ykr00470  D-Amino acid metabolism
ykr00480  Glutathione metabolism
ykr00500  Starch and sucrose metabolism
ykr00511  Other glycan degradation
ykr00520  Amino sugar and nucleotide sugar metabolism
ykr00521  Streptomycin biosynthesis
ykr00523  Polyketide sugar unit biosynthesis
ykr00525  Acarbose and validamycin biosynthesis
ykr00540  Lipopolysaccharide biosynthesis
ykr00541  O-Antigen nucleotide sugar biosynthesis
ykr00542  O-Antigen repeat unit biosynthesis
ykr00543  Exopolysaccharide biosynthesis
ykr00550  Peptidoglycan biosynthesis
ykr00552  Teichoic acid biosynthesis
ykr00561  Glycerolipid metabolism
ykr00562  Inositol phosphate metabolism
ykr00564  Glycerophospholipid metabolism
ykr00565  Ether lipid metabolism
ykr00592  alpha-Linolenic acid metabolism
ykr00600  Sphingolipid metabolism
ykr00620  Pyruvate metabolism
ykr00623  Toluene degradation
ykr00625  Chloroalkane and chloroalkene degradation
ykr00626  Naphthalene degradation
ykr00627  Aminobenzoate degradation
ykr00630  Glyoxylate and dicarboxylate metabolism
ykr00633  Nitrotoluene degradation
ykr00640  Propanoate metabolism
ykr00643  Styrene degradation
ykr00650  Butanoate metabolism
ykr00660  C5-Branched dibasic acid metabolism
ykr00670  One carbon pool by folate
ykr00680  Methane metabolism
ykr00710  Carbon fixation by Calvin cycle
ykr00720  Other carbon fixation pathways
ykr00730  Thiamine metabolism
ykr00740  Riboflavin metabolism
ykr00750  Vitamin B6 metabolism
ykr00760  Nicotinate and nicotinamide metabolism
ykr00770  Pantothenate and CoA biosynthesis
ykr00780  Biotin metabolism
ykr00785  Lipoic acid metabolism
ykr00790  Folate biosynthesis
ykr00860  Porphyrin metabolism
ykr00900  Terpenoid backbone biosynthesis
ykr00907  Pinene, camphor and geraniol degradation
ykr00910  Nitrogen metabolism
ykr00920  Sulfur metabolism
ykr00930  Caprolactam degradation
ykr00999  Biosynthesis of various plant secondary metabolites
ykr01040  Biosynthesis of unsaturated fatty acids
ykr01053  Biosynthesis of siderophore group nonribosomal peptides
KO pathway
ko01100   
LinkDB

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