Pectobacterium atrosepticum 21A: GZ59_12000
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Entry
GZ59_12000 CDS
T03293
Name
(GenBank) efflux transporter, RND family, MFP subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
pato
Pectobacterium atrosepticum 21A
Pathway
pato01501
beta-Lactam resistance
pato01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
pato00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
GZ59_12000
01503 Cationic antimicrobial peptide (CAMP) resistance
GZ59_12000
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pato03036
]
GZ59_12000
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pato02000
]
GZ59_12000
01504 Antimicrobial resistance genes [BR:
pato01504
]
GZ59_12000
Chromosome and associated proteins [BR:
pato03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
GZ59_12000
Transporters [BR:
pato02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
GZ59_12000
Antimicrobial resistance genes [BR:
pato01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
GZ59_12000
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-barrel_RND
BSH_RND
HH_MFP_RND
RND-MFP_C
HH_CzcB
YknX_C
Beta-barrel_RND_2
BSH_CzcB
HH_EMRA
HH_AAEA_pHBA
EAD11
Motif
Other DBs
NCBI-ProteinID:
AIK13050
LinkDB
All DBs
Position
complement(1307389..1308582)
Genome browser
AA seq
397 aa
AA seq
DB search
MNKNRGLTPLAAVLMLSGGLMLAGCDDGNNQQGGAQQQMPEVGIVTLKTEALNVMTELPG
RTSAYRIAEVRPQVGGIILKRNFVEGSDVKAGASLYQIDPATYQANYNSAKGSLAQAQAQ
AEIARLTVNRYKPLLGTNYVSKQDYDQAVATSRQADAAVQAAKATVDTAQINLAYTKVNA
PIEGRVGKSTVTEGALVGTSQATALTTLQQLDPIYVDVTQSSNDFLQLKRELENGTLKQN
EGKANVRLLLENGTEYTEAGTLEFSDVTVDETTGSITLRAIFPNPQHNLLPGMFVRARLD
SGVNPTALLVPQQGITRDPRGQATAMVVGEGDKVEPRTLKTSKAIGDKWLVAEGLKAGDR
VILTGLQKIRPGAQVKAKEVAPENQQAPQASAEPAKS
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaaaacagagggctaacgcctctggcggcagttctgatgctttctggcggctta
atgcttgcgggatgtgatgacggcaacaatcagcaaggtggcgcacagcagcagatgcct
gaagtgggtattgttacgttgaaaacggaagcactgaatgttatgaccgagctgccgggc
cgtacaagtgcttaccgtattgcagaggttcgcccacaggttggcggtattatcctcaaa
cgcaacttcgttgaaggttccgacgttaaagctggtgcatcgctgtatcagatcgatccg
gcgacatatcaggcaaactataatagcgccaaaggctcacttgctcaggcacaggctcag
gcagaaattgcccgcctgacggttaaccgctataaaccgctgctgggcaccaactacgtc
agcaagcaggattacgatcaggcagttgccacctctcgtcaggctgatgcagcggttcag
gctgctaaagcgacggttgacactgcgcaaatcaatctggcttacaccaaagttaatgca
ccaatcgaaggccgcgtgggtaaatccacggtaacggaaggcgcattggtgggcaccagc
caagcaacggcattaacgaccttacagcagcttgatccaatctatgtggatgtcacgcag
tccagtaatgatttcctgcaactgaagagagagctggaaaacggcacgctgaaacaaaat
gaaggcaaagcgaatgttcgcctgctgttggaaaacggtaccgaatataccgaagcgggt
acattggaattctctgatgtaacggtagatgaaaccacgggctccatcacgctgcgcgct
attttcccaaacccacagcataacctgctccccggaatgtttgtacgagctcgcctcgat
tccggtgttaacccaacggctttgttagttcctcaacaaggtataacccgcgatccgcgt
ggtcaggccacagcgatggttgttggggaaggcgataaagtggaacctcgcacgcttaaa
accagtaaagcaatcggtgacaaatggttggttgccgaaggcttgaaagcgggcgatcgc
gttatcctcactggtctgcaaaaaatcagacccggtgcgcaggtgaaagctaaagaagtc
gctccagaaaatcagcaggcgccgcaagcgtcagcagaacccgcgaagtcttaa
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