Phragmites australis (common reed): 133883367
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Entry
133883367 CDS
T10575
Name
(RefSeq) isoleucine--tRNA ligase, cytoplasmic-like
KO
K01870
isoleucyl-tRNA synthetase [EC:
6.1.1.5
]
Organism
paua Phragmites australis (common reed)
Pathway
paua00970
Aminoacyl-tRNA biosynthesis
Brite
Enzymes [BR:
paua01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.5 isoleucine---tRNA ligase
133883367
Amino acid related enzymes [BR:
paua01007
]
Aminoacyl-tRNA synthetase
Class I (U)
133883367
Transfer RNA biogenesis [BR:
paua03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
133883367
Prokaryotic type
Other AARSs
133883367
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Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
DUF5915
tRNA-synt_1g
tRNA-synt_1e
Motif
Other DBs
NCBI-GeneID:
133883367
NCBI-ProteinID:
XP_062178662
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All DBs
Position
10:6818717..6833401
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AA seq
1172 aa
AA seq
DB search
MEHVCEGKDFSFPAQEERVLQLWSELDAFHEQLRRTEGGEEFVFYDGPPFATGLPHYGHI
LAGTIKDVVTRHQSMRGRHVSRRFGWDCHGLPVEFEIDKALGITNRQQVLDLGIGKYNET
CRSIVTKYVAEWEAIVTRSGRWIDFKNDYKTMDLNFMESVWWVFAQLWEKDLVYKGFKVM
PYSTGCKTALSNFEAALDYRTVPDPAVMLSFPIVGDPDNAALVAWTTTPWTLPSNLALCV
NANLMYAKVKDKSNGAVYVVAESRLGQLPVKAKASGKKQPSSKGSNTEAVPDGLDKESYE
LLAKVPGSSLVGLKYAPLFDFFTEFQDTAFRVIADNYVTDDSGTGVVHCAPAFGEDDHRV
CLAAGIIEAAGLVVAVDDDGCFTEKVSEFKGRHVKEADKDIISAVKDKGRLVSKGSIEHS
YPFCWRSGTPLIYRAVPSWFVKVEKIKDQLLECNKETYWVPDYVKEKRFHNWLEGARDWA
VSRTRFWGTPLPLWISQDGEEIVVMDSIEKLEKLSGAKITDLHRHYVDDITIPSRRGPEY
GVLKRVEDVFDCWFESGSMPYAYIHYPFENRELFEKNFPGNFVAEGLDQTRGWFYTLMVL
STALFGKPAFKNLICNGLVLAEDGKKMSKSKKNYPATTELIDEYGADALRLYLINSPVVR
AESLRFKRSGVYGVVKDVFLPWYNAYRFLVQNAKRLEVEGLATFSPIDQAVLLKSSNVLD
HWINSATESLVSFVHQEMDAYRLYTVVPYLVKYIDNLTNIYVRFNRKRLKGRTGEEDCRI
SLSTLYHALVTTCVAMAPFTPFFTEVLYQNLRKVSSKSEESIHFCKFPSTTGERDERVEQ
SVNRMMTIIDLARNIRERHNKALKTPLKEMVVVHPDNEFLEDITGKLKEYVMEEMNVKTV
TPCNDPFMYASLRAEPNFSVLGKRIGRDMGKVSSEVKKMTQEQILAFEKSGEISFFGHCL
KLDDIKVVRQFKRPENVSEKEIDAAGDGDVLVILDLRADQSLFEAGVAREVVNRIQKLRK
TAQLEPTDPVDVYYKPTDNDKNKLEEILKSQDQYIRDALGSSLLPKEMAPPDVVVICEES
HNVHDMSFVIYIARSSPVLSPNFLPHASGNSDHVEALRVYLLSRSISRLKNEFHAGNGMI
TVDCIEGYPPISLQLGKHVFLSVGDFYLASRS
NT seq
3519 nt
NT seq
+upstream
nt +downstream
nt
atggagcacgtatgcgaggggaaggatttctccttccccgcgcaggaggagcgggtgctc
cagctgtggtcggagctcgacgccttccacgagcagctccgccgcacggagggtggcgag
gagttcgtcttctacgacgggccgcccttcgccacggggctcccgcactacggccacatc
ctcgccggcaccatcaaggacgtggtcacccggcaccagtcgatgcggggccgccacgtc
tcccggcggttcgggtgggactgccacggcctccccgtcgagttcgagatcgacaaggcg
ctcggcatcaccaaccggcagcaggtgctcgaccttggcatcggcaagtacaacgagacg
tgccgcagtattgtcaccaaatacgtcgccgagtgggaggccatcgtcacgcgctcgggg
aggtggattgactttaagaacgactacaagaccatggacctcaacttcatggagagcgtc
tggtgggtgtttgcgcagctctgggagaaggacctcgtctacaagggtttcaaggtgatg
ccttacagcacaggctgcaaaactgcactgtcaaactttgaggcagcgctggactatagg
actgttccagacccagcggtgatgctatctttccctattgttggtgatccggacaatgcg
gctcttgttgcatggactacaacaccttggacacttccgagtaacctagcattgtgtgtc
aatgccaaccttatgtatgccaaggttaaggacaagtcaaatggagcagtatacgttgtt
gcggaatctaggcttggtcaattgccagttaaggccaaagcttcaggaaagaagcaacca
tcttctaagggaagcaacactgaagctgttccagatggtttggataaggaatcatatgaa
ttattggcaaaggttcctggttcatctttggttggcctaaaatacgctcctctgtttgat
tttttcacggagtttcaagatactgcctttagagtgattgcggataactatgtaactgat
gatagtggaactggtgttgtccactgtgctcctgcttttggtgaagatgaccatcgtgtt
tgccttgctgctgggataattgaggctgctggacttgttgttgctgttgatgatgatggt
tgctttacagaaaaagtatccgagtttaaagggcgacatgtcaaagaagccgataaggat
atcatcagtgctgttaaggataaaggaagacttgttagtaaagggagcatcgaacactct
tatcctttttgttggcgctcgggtactcctcttatttatcgggctgttccaagctggttt
gtcaaggttgagaagattaaggaccaattgctggaatgtaacaaggagacctactgggtg
cctgattatgttaaggaaaaaaggttccataactggcttgaaggcgcccgtgattgggct
gttagcagaactagattctggggtactccacttccactgtggattagccaagatggtgaa
gaaattgttgttatggattccattgagaaacttgaaaaattatctggtgccaagattacc
gatcttcaccgacactatgttgatgatattacgattccctctaggagaggacctgagtat
ggggtgctcaaacgtgttgaggatgttttcgactgctggtttgagagtgggtccatgcca
tatgcgtacattcattatccattcgagaatcgtgaactatttgaaaagaattttcctggc
aatttcgtggcagagggtttggaccagacacgaggatggttctatactctgatggtgctc
tcaacggcactgtttgggaagcctgcatttaaaaatcttatatgcaatggtcttgtcttg
gctgaggatggtaagaaaatgagcaagagtaaaaagaattatcctgcaaccacagaactc
attgatgagtatggagcggatgctttgaggctatatttgataaattctccagttgtacgt
gcagagtctctacgatttaaacgtagcggtgtttatggtgttgtgaaagatgtcttcctc
ccgtggtataatgcatatagatttcttgttcaaaatgcaaagagacttgaagttgagggt
cttgccacattttctccaattgatcaagcggtccttctaaagtcatccaatgtgttagat
cactggataaactctgcaactgaaagtctagtcagctttgttcaccaggagatggatgca
tatcgcctctacacggttgtgccatatttggtaaaatacattgacaatcttactaacata
tatgtgcgtttcaaccgcaaacggttaaaaggacgtactggagaagaagactgcagaatt
tctctctcaacgctctaccatgcacttgtaacaacttgcgtggcgatggctccatttaca
ccgttctttactgaagttctttatcaaaatctgcggaaggtgtcaagtaagtcggaggag
agcattcatttctgcaagttcccttcaacaactggggagagagatgagcgtgttgagcaa
agtgtaaataggatgatgaccatcattgatcttgcacgcaatattcgtgaacggcataac
aaagctctcaaaacaccactcaaggagatggtggttgtgcatccagacaatgaatttctt
gaagacatcactgggaaactaaaagagtatgttatggaggagatgaatgttaagactgtc
actccatgtaatgacccctttatgtatgcttccctgcgggccgaacccaatttcagcgtg
ctaggcaaaagaattgggagagacatgggcaaagtatcaagtgaggtgaagaaaatgact
caggaacagatcttagcctttgagaaaagtggagagatttcattctttggtcattgcttg
aagctagatgatattaaggtggtccgacaattcaagcgtcctgaaaatgtgtcagagaag
gagattgatgccgcaggagatggtgacgttttagtcatattggatctacgagctgatcag
tcattgtttgaagctggagttgctcgagaggttgtgaacagaatccaaaagttacggaag
actgctcaactcgaacctactgatccagttgatgtgtattacaaacctacggacaacgac
aaaaataagctggaagagattttgaagtcacaggatcagtatattagagacgcacttggt
tcatcactccttccgaaggaaatggcaccaccagatgttgtagtaatttgcgaggagtcg
cacaatgtacatgacatgtcgtttgtcatatacattgcaaggtcctcccctgtgctttca
ccaaattttcttcctcatgcctcaggcaacagtgaccatgtggaggcgttgagagtatat
cttttgtcaaggtctatttccaggttgaagaacgagttccatgctggaaatggcatgatt
acggttgactgcattgaaggttatccaccaatcagtctacaactgggaaaacatgtcttt
cttagtgtaggggatttttatttggctagtcgatcctga
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