Phragmites australis (common reed): 133889279
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Entry
133889279 CDS
T10575
Name
(RefSeq) transcription factor PIF1-like isoform X1
KO
K16189
phytochrome-interacting factor
Organism
paua Phragmites australis (common reed)
Pathway
paua04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
133889279
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
paua03000
]
133889279
Transcription factors [BR:
paua03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
133889279
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GFIT
Motif
Pfam:
HLH
bHLH_SAC51
bHLH_LHW
bHLH_NPAS4
IL3
Motif
Other DBs
NCBI-GeneID:
133889279
NCBI-ProteinID:
XP_062185772
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All DBs
Position
13:28158281..28159972
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AA seq
189 aa
AA seq
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MEDGGAPRRSTPPTRRSRLAEFHNFSERRRRDRINEKLKALQELLPNCTKTDKVSMLDEA
IDYLKSLQLQLQISRSAAWMLVMGKGMAPVVPPELQQYMHYITADPAQVPPLRPSQPRPF
QITQANPQRQSNVESDFLSQMQNLHPSEPPQNFLRPPKLQLYTPGGSLAGTSHNGGWISE
RSSSYNFME
NT seq
570 nt
NT seq
+upstream
nt +downstream
nt
atggaagatggcggtgctccaagaaggtctactccgcctactcggagaagcagattagct
gagttccacaatttctctgaaaggaggagaagggataggatcaatgagaagctcaaggca
ctgcaagagttacttccgaattgcaccaagaccgacaaagtgtccatgctagatgaagcg
atcgactacctgaaatcacttcagctgcaacttcagatcagcagatctgctgcttggatg
ctggtcatggggaagggaatggcaccagtggtgcctcctgagctgcaacaatacatgcac
tacatcacagctgatcctgcccaggtgcctcccttgcgcccctcccagccccggccgttt
cagataactcaagccaacccgcagcgacagtctaacgtcgagtcagacttcttgagccag
atgcagaacttgcacccttctgagccacctcagaacttcctcaggccaccaaaattacaa
ctttatacaccggggggtagcctagctggcacgagtcataacggtgggtggatttctgag
aggagttcctcgtacaactttatggaatga
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