Phragmites australis (common reed): 133892393
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Entry
133892393 CDS
T10575
Name
(RefSeq) ATP-dependent helicase rhp16-like isoform X1
KO
K15083
DNA repair protein RAD16
Organism
paua Phragmites australis (common reed)
Brite
DNA repair and recombination proteins [BR:
paua03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NER4 complex
133892393
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NCBI-GeneID:
133892393
NCBI-ProteinID:
XP_062189120
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Position
15:9731893..9739176
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AA seq
824 aa
AA seq
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MPRRTGNPSSGSSSRRRRRDEEEDEFPSDDTADSDFVVDSKDEAKDEDEDEGFAPDADGA
PAVAVAALPPPSLPPRKGKGRRSKKARDEDTPPMPWEEWEVANDKWLDGRMAADVGVEAS
ESPEAAAGSVPTAEPAPEVVLPLLRFQKEWLAWALVQEASPTRGGILADEMGMGKTIQAI
SLVVTARRLRPPGQQAAASSSAPRGPPMQRVGCTLVICPVVAVIQWVQEIERHTAKGSVR
VLLHHGAKRGTQKFDFDNYDFVITTYSTIEADYRKHIMPPKSPCDYCNKLLDPSRMKVHL
KYYCGPDAQRTEKQAKQQSKKWGSKKAKGKRRGHKKDGGDELGTQSRGMSPLHMVWWKRI
ILDEAHFIKDRRCNTARAVFALESEYKWALSGTPLQNRVGELYSLIRFLQIFPYSNYFCK
DCNCEVLDTRSMKKFCECGHSTVRHFCWWNKYISKPIQWGSASDEGQRAMVLLKEKVLKG
IVLRRTKKGRAADLALPPKIVTLRRDSFDKNEMEFYEALYTQSCTQFDSYVVAGTLMNNY
AHIFDLLTRLRQAVDHPYLVAYSKTAKLCEGLKNEGMESQCGICHNMAEDHVVTSCDHVF
CKTCLIDYSATLGNVSCPSCSKPLTVDLTTQNSGEKVTPNAGGRKCSGILGRLESLADFK
TSTKIDALREEVRNMIEHDGSAKGIVFSQFTSFLDLIQFSLEKSGIKCVQLNGAMNIAEK
RRAIDTFTDDPDCRIFLMSLKAGGVALNLTVASHVFLMDPWWNPAVESQAQDRIHRIGQF
KPIRSVRFVIKDTVEERILQLQEKKRLVFEGTVGDSPEAMSKLT
NT seq
2475 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgccgaaccgggaacccctcctccgggtccagcagccgccgccgccgccgcgac
gaggaggaggacgagttcccctccgacgacaccgccgactccgacttcgtcgtcgactcc
aaggacgaggcaaaggacgaggacgaggacgaggggttcgcgcccgatgcggacggcgcg
cccgcggtggccgtggcggcgctgccgccgccctcgcttccgccgcgcaaggggaagggg
aggaggagtaagaaggcgagggacgaggacacgccgcccatgccgtgggaggagtgggag
gtggccaacgacaagtggctcgacgggcgcatggcggcggacgtgggcgtcgaggcctcg
gagtccccggaggctgcggcggggtccgtgccgacggcggagccggccccggaggtggtg
ctcccgctgctgcgcttccagaaggagtggctcgcttgggcgctcgtgcaggaggcctcc
cccacgcgcgggggtatcctcgccgacgagatggggatggggaagaccatccaggccatc
tcgctcgtcgtcaccgcgcgccggctccggcccccaggccagcaggcggctgcctcctcc
tcggcgccgcgtggccctccgatgcagcgggtggggtgcacgctggtcatctgcccggtg
gtggccgtcatccagtgggttcaggagatcgagcggcataccgccaaaggcagcgtgcgt
gtgctgctccaccacggcgctaagcgcggcacacagaagttcgatttcgacaactatgac
ttcgttatcaccacctactctaccatcgaggcggactaccggaagcacatcatgccaccc
aagagtccgtgcgactactgcaataaattgttagaccccagcaggatgaaggtgcacttg
aagtattactgtggacctgatgcccagcgcacggagaagcaggctaagcaacagagcaag
aagtggggtagcaagaaggcgaagggaaagagaaggggtcacaagaaggacggtggcgat
gaattaggaacccagtcaaggggtatgtcaccactgcacatggtgtggtggaagcggatt
atcttggatgaggctcatttcataaaagatcgacgatgtaatactgcaagggctgttttt
gctttagagtcagaatacaagtgggctcttagtggaacacccttgcagaaccgtgttgga
gaactttactcactgattcgcttcttgcaaatcttcccctactcaaactatttctgcaag
gactgtaactgtgaggtactagatacccgcagtatgaagaaattttgtgagtgtggtcac
tcaactgttaggcacttttgctggtggaataagtacatttcgaagccaatacagtggggc
tcagcaagtgatgagggccaaagagccatggttcttctgaaggagaaagttctgaaaggc
atcgtgttaaggcgcacaaaaaaaggcagagctgcagatcttgctcttccaccaaagatt
gtgacattgaggcgggactcttttgataaaaacgaaatggaattctatgaagctttatat
actcaaagctgtacgcaatttgattcatatgtcgtggctggaacattgatgaacaactat
gctcatatctttgatctcctcacaaggttgagacaggctgtcgatcatccatatcttgta
gcatattctaagacagcaaaactttgtgaagggttaaaaaatgaaggaatggaaagtcag
tgtggtatatgtcataatatggctgaagatcatgtggttacttcttgtgatcatgtattc
tgcaagacttgtttgattgactactctgcaactttggggaatgtttcatgtccatcctgt
tcaaaaccccttactgtggacttaacaacgcaaaattcaggagaaaaggtcactccaaat
gctgggggtcggaaatgctcaggaattttaggcagactagaaagccttgcggattttaaa
acaagtacaaaaattgatgccttgagagaggaggtaagaaacatgattgagcatgatggt
tctgccaaagggattgtgttcagtcagttcacatcattcttggatttgattcaattctcc
ctggagaagtctggcatcaagtgtgtccaacttaatggggccatgaacattgccgagaag
agaagagccatagataccttcaccgatgatccggactgcaggatatttctgatgagcttg
aaagctggaggagtagctctgaatctcactgtagcatcccatgttttcttgatggaccct
tggtggaatcctgcagttgagagccaggcccaggatcggatccaccgaatcgggcaattc
aagccaatcagaagcgtgaggtttgtgatcaaggacaccgttgaagagcgcatattgcaa
cttcaagagaagaagcgactggtgtttgaaggcaccgttggcgactcaccggaggccatg
tcaaagctgacctga
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