KEGG   Phragmites australis (common reed): 133899098
Entry
133899098         CDS       T10575                                 
Name
(RefSeq) uncharacterized protein LOC133899098 isoform X1
  KO
K12839  survival of motor neuron-related-splicing factor 30
Organism
paua  Phragmites australis (common reed)
Pathway
paua03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:paua00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    133899098
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:paua03041]
    133899098
Spliceosome [BR:paua03041]
 Complex A
  U2 snRNP components
   U2 related factors
    133899098
 Complex B
    133899098
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   Other proteins involved in snRNP biogenesis
    133899098
SSDB
Motif
Pfam: SMN_Tudor TUDOR Agenet DUF4537 RNA_pol_Rpb2_5
Other DBs
NCBI-GeneID: 133899098
NCBI-ProteinID: XP_062196013
LinkDB
Position
18:complement(712938..717394)
AA seq 325 aa
MEDLSVVELASNLSTYKDQLREVSHLAPSLLRFHFPLACGSSLAWSVPLRVRKFIKEKKD
DPGISEYLDMEKELQEVIMLTEELLATAKQSESAQNDAGLSPPNYSSGVQSEGLDDLSHS
HKFEVGTRVQAVWSEDGEWYNATVEALTPNGYYVAYDGWGNKEEVDPANVRPLEEEADDA
LLQAEKKAEATKMAIKRKIEQAATSDFQMRSLPTKLKIDPSDPEDVKAVKRKKIHAFKSK
ARFEQLELAQNKRQNAWQQFQTTNGKAKKVGFFSGHKKESIFKSPDDHRGKVGVTGSGKG
LTDFQRREKHLHLKGGSADTLNDEE
NT seq 978 nt   +upstreamnt  +downstreamnt
atggaggacctgagcgtggtggaactcgcctccaacctctctacctacaaggaccagctc
cgcgaggtctctcacctcgctccttctctcttgcggtttcacttccctcttgcttgcggc
tcttctctcgcttggagcgttcctttgcgggttaggaagtttatcaaggagaaaaaagat
gaccctggaatttctgaatatcttgatatggaaaaagagcttcaagaggttattatgtta
actgaagagcttttggcaactgcaaagcaaagtgagagtgcccagaatgatgcaggtcta
tcaccaccaaattattcatctggagtgcaatcagagggactggacgatctttcgcattcc
cataagtttgaggttgggactagagtgcaagctgtgtggagtgaagatggggagtggtac
aatgcaacagttgaagctttgacaccaaatggatattatgtagcctatgacggctgggga
aataaggaagaagtggacccagctaatgtcaggccgcttgaggaggaagcggatgatgct
ttgctacaggctgaaaagaaagctgaagctacaaaaatggcaataaaaaggaaaattgaa
caagccgcaacatctgattttcagatgcgtagcttgcctaccaaacttaaaatcgatcca
agtgatcctgaggatgtcaaagctgtgaaacgtaagaaaatacatgctttcaaatcaaaa
gcccgctttgagcaacttgaacttgcacaaaacaagcggcagaatgcatggcagcagttt
caaacaaccaacgggaaagctaaaaaggttggattcttttctggtcacaaaaaggagagc
atcttcaagtcaccagatgatcaccgaggtaaggttggtgtcactgggagcggcaaaggc
ctgaccgatttccagaggagggagaagcacctgcacctcaagggtggatctgcggacaca
ctaaatgatgaggaataa

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