Phragmites australis (common reed): 133904824
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Entry
133904824 CDS
T10575
Name
(RefSeq) E3 ubiquitin-protein ligase MIEL1-like
KO
K10144
RING finger and CHY zinc finger domain-containing protein 1 [EC:
2.3.2.27
]
Organism
paua Phragmites australis (common reed)
Pathway
paua04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
133904824
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
paua04121
]
133904824
Enzymes [BR:
paua01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
133904824
Ubiquitin system [BR:
paua04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
133904824
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zinc_ribbon_6
zf-CHY
zf-RING_2
zf-C3HC4_2
zf-C3HC4
zf-RING_5
zf-RING_UBOX
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
133904824
NCBI-ProteinID:
XP_062202384
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All DBs
Position
22:18310911..18324278
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AA seq
292 aa
AA seq
DB search
MGGAHLPGGEDVSHDVVGDGDVDRRDVGKMEHRCEHYRRRCKIVAPCCSQVFPCRHCHNE
TTASGDRHTICRQNVEKVVCLLCDTEQLVSQVCVSCGVNMGEYFCDICKFYDDDTEKGQY
HCYDCGICRVGGKENFFHCVKCGSCYSVILRDNHQCVENSMRQNCPICYEYLFDSLQGTR
VLNCGHTMHMECFSDMVGHNKYTCPICSKTALDMTHHWEALDQEIEATIMPPVYRYKIWV
LCNDCNKVSEVNFHVIGHKCSHCNSYNTRSTSRPADSSGSSSPTTDSSDNNL
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atgggaggagcgcacttacccggcggcgaggacgtctcccacgacgtggtcggcgacggg
gacgtcgaccgccgcgacgtgggcaagatggagcaccggtgcgaacattaccggcggagg
tgcaagatcgtggcgccgtgctgcagccaggtgtttccctgccgccattgccacaacgag
accacggcttcaggagatcggcatacaatatgtcgccagaatgttgaaaaagtagtatgt
ctactctgtgatactgaacaactggtatcacaagtgtgtgtaagctgtggagtcaatatg
ggcgagtacttctgtgatatatgcaagttttatgatgatgatacagagaaagggcagtac
cattgctatgactgtggcatatgcagggttggtggcaaggaaaacttcttccactgcgta
aagtgtgggtcttgctattctgttatactgcgcgataaccatcagtgtgtagagaactca
atgagacagaattgcccaatctgttatgagtatctatttgattcgttacaaggaacaaga
gttcttaactgtggacacacgatgcacatggaatgtttttctgatatggtggggcataac
aagtacacttgtccaatatgctctaagacagctcttgatatgacccatcactgggaagcg
ttggatcaagagatcgaagcaacaatcatgcctcctgtatatcgttacaagatttgggtg
ctttgcaatgactgcaacaaagtctcagaagtgaacttccatgtgattggccataagtgc
agccactgcaactcgtacaatactcgatcaacatcgcgacctgcagattcatcaggaagc
agttcgccgacaacggactcctctgacaacaacctgtag
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