Phragmites australis (common reed): 133909138
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Entry
133909138 CDS
T10575
Name
(RefSeq) transcription factor PCL1-like isoform X1
KO
K28173
GARP family transcription factor, LUX subfamily
Organism
paua Phragmites australis (common reed)
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
paua03000
]
133909138
Transcription factors [BR:
paua03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-like factors
133909138
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Paralog
GFIT
Motif
Pfam:
Myb_DNA-binding
HPIP
Motif
Other DBs
NCBI-GeneID:
133909138
NCBI-ProteinID:
XP_062207420
LinkDB
All DBs
Position
2:44346185..44348668
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AA seq
222 aa
AA seq
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MDDAGSCGRVLEWELGLPAAAELTPVSHPLIPPALAAAFHINIAGACPSSFDSPLAHDSP
TSHLSFRCDEDEDEEGDGEIEDAASGGGVCRGRSVGKKARMVWTPELHHRFVEAVARLGD
KGAVPKAIVRLMNVEGLTRENVASHLQKYRLYLKRTHNPTTPPPSSPPSLPPAYGSPLQP
PDASRHPEPDRLLRVPLPRLSTPGYGKEMERGCVRRCPRTSS
NT seq
669 nt
NT seq
+upstream
nt +downstream
nt
atggacgacgccggctcgtgcggccgcgtgctcgagtgggagctcggcctccccgcggcc
gccgagctgacgccggtctcgcacccgctcatcccgccggcgctcgccgccgcgttccac
atcaacatcgcgggcgcctgcccctcctcgtttgactcgccccttgcgcacgactccccc
acctcccacctgtccttccgctgcgacgaggacgaggacgaggagggagatggggagatc
gaggacgctgcctccggaggaggggtgtgccgagggaggagcgtcgggaagaaggcgagg
atggtgtggacgccggagctgcaccaccggttcgtcgaggcggtggcgcgcctcggcgat
aagggcgccgtgcccaaggccatcgtgcggctcatgaacgtcgagggcctcacccgcgag
aacgtcgccagtcacctccagaagtatcgcctctacctcaagcggacgcacaaccccacc
acgccaccgccgtcgtctcctccgtccctgccgccggcatacggctccccccttcagccc
ccagacgcctcccgacaccccgaaccggatcggttactgcgcgttcctctcccgcgacta
agcactccaggctacgggaaggaaatggaacgaggatgcgtaagacgctgtccgagaacg
agctcatga
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