Phragmites australis (common reed): 133912377
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Entry
133912377 CDS
T10575
Name
(RefSeq) ABC transporter I family member 20-like
KO
K12608
CCR4-NOT complex subunit CAF16
Organism
paua Phragmites australis (common reed)
Pathway
paua03018
RNA degradation
Brite
Messenger RNA biogenesis [BR:
paua03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
133912377
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NCBI-GeneID:
133912377
NCBI-ProteinID:
XP_062211052
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Position
3:15364958..15367819
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AA seq
323 aa
AA seq
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MAPTVEISHLSFTYPGIDGRPPPGAPPLIEDVCFSLDAGQRCLLLGSNGAGKTTILKILG
GKHMVDPSMVRVLGRSAFHDTALTSSGDLCYLGGEWRRDVAFAGYQVNIQMDISAEKMIF
GVAGVDPIRRDELIKILDIDIAWRMHKASDGQRRRVQICMGLLKPFKVLLLDEITVDLDV
LARANLLTYLKKECEERGALIIYATHIFDGLDDWPTHLVYIAHGKLQLALPLEKVKEMSQ
LSLMRTVETWLRKERDEDRRKRKERNEKGLPEFDKAVEGSRVIGNPAKSAARVVNNGWAA
GRLTSTIAGEENFIFSSNSVLRR
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atggcgccaacggtggagatcagccacctctccttcacctacccgggcatcgacggccgc
ccaccgcccggcgcgccgccgctcatcgaggacgtctgcttctccctcgacgccggccag
cgatgcctcctcctcggctccaacggcgcaggcaagacgacgatactgaagattctgggt
gggaagcacatggtggatccgagcatggtgcgggtcctgggcaggtccgccttccacgac
acggctctcacgtcctccggtgacctctgttacctcggcggcgagtggaggcgagacgtg
gcctttgccggctaccaggtgaatattcagatggacatatcggcggagaagatgattttt
ggtgttgcgggcgttgatccaataaggagagatgaacttatcaagattttagatattgac
attgcctggcgcatgcacaaggcatcagatggtcagaggagacgagtccagatttgcatg
ggacttcttaaacccttcaaggttctccttcttgatgaaatcacagtcgacctggatgtg
ttggcaagagcaaatctgttgacatacctaaagaaggaatgtgaggaacgaggtgcacta
atcatctatgcaacacatatttttgatggccttgatgattggccgacacaccttgtttat
attgctcatgggaagctgcaattggcgcttcctttggaaaaggtgaaagaaatgagccag
ttatctctcatgagaacagtggagacctggttgaggaaagaaagagatgaggataggagg
aagcgaaaggagcgaaacgagaaaggcctcccggagttcgacaaggctgttgagggtagc
cgggttatagggaatccagcaaagagcgctgccagagtagtaaacaacgggtgggcagca
ggacggctcacctcaacgatcgcgggagaggagaacttcattttcagctctaacagcgtc
cttagaagatga
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