Phragmites australis (common reed): 133919641
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Entry
133919641 CDS
T10575
Name
(RefSeq) uncharacterized protein LOC133919641
KO
K03868
E3 ubiquitin-protein ligase RBX1 [EC:
2.3.2.32
]
Organism
paua Phragmites australis (common reed)
Pathway
paua03420
Nucleotide excision repair
paua04120
Ubiquitin mediated proteolysis
paua04141
Protein processing in endoplasmic reticulum
Brite
Enzymes [BR:
paua01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.32 cullin-RING-type E3 NEDD8 transferase
133919641
Ubiquitin system [BR:
paua04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
133919641
Multi subunit type E3
SCF complex
Ring finger protein
133919641
Cul2 complex
133919641
Cul3 complex
133919641
Cul4 complex
133919641
Cul7 complex
133919641
Cul8 complex
133919641
Cul9 complex
133919641
DNA repair and recombination proteins [BR:
paua03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
133919641
TCR (transcription coupled repair) factors
Cul4-CSA complex
133919641
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
133919641
NCBI-ProteinID:
XP_062220079
LinkDB
All DBs
Position
5:39912470..39915066
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AA seq
114 aa
AA seq
DB search
MDKGAVAVAVASAPASSSSAAGKKAKRFEIKKWNAVSLWAWDIVVDNCAICRNHIMDLCI
ECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH
NT seq
345 nt
NT seq
+upstream
nt +downstream
nt
atggacaagggtgccgtcgccgtcgccgtggcctctgcccccgcctcctcctcctccgcc
gctgggaagaaggcgaagcgtttcgagatcaagaagtggaacgccgtctccctctgggcc
tgggacatcgtggtggacaactgcgccatctgccgcaaccacatcatggacctctgcatc
gagtgccaggcgaaccaggcgagcgccaccagtgaggagtgcaccgtcgcttggggagtt
tgcaaccacgcattccacttccactgcatcagccgttggctcaagacccgtcaagtgtgc
cctctagacaacagcgagtgggagttccagaagtatggtcactag
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