KEGG   Phragmites australis (common reed): 133919641
Entry
133919641         CDS       T10575                                 
Name
(RefSeq) uncharacterized protein LOC133919641
  KO
K03868  E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
Organism
paua  Phragmites australis (common reed)
Pathway
paua03420  Nucleotide excision repair
paua04120  Ubiquitin mediated proteolysis
paua04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:paua00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    133919641
   04120 Ubiquitin mediated proteolysis
    133919641
  09124 Replication and repair
   03420 Nucleotide excision repair
    133919641
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:paua04121]
    133919641
   03400 DNA repair and recombination proteins [BR:paua03400]
    133919641
Enzymes [BR:paua01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.32  cullin-RING-type E3 NEDD8 transferase
     133919641
Ubiquitin system [BR:paua04121]
 Ubiquitin ligases (E3)
  UBL E3 ligases
   133919641
  Multi subunit type E3
   SCF complex
    Ring finger protein
     133919641
   Cul2 complex
     133919641
   Cul3 complex
     133919641
   Cul4 complex
     133919641
   Cul7 complex
     133919641
   Cul8 complex
     133919641
   Cul9 complex
     133919641
DNA repair and recombination proteins [BR:paua03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      133919641
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      133919641
SSDB
Motif
Pfam: zf-rbx1 zf-ANAPC11 zf-RING_2 zf-C3HC4 zf-C3HC4_2 zf-RING_11 DUF8003
Other DBs
NCBI-GeneID: 133919641
NCBI-ProteinID: XP_062220079
LinkDB
Position
5:39912470..39915066
AA seq 114 aa
MDKGAVAVAVASAPASSSSAAGKKAKRFEIKKWNAVSLWAWDIVVDNCAICRNHIMDLCI
ECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH
NT seq 345 nt   +upstreamnt  +downstreamnt
atggacaagggtgccgtcgccgtcgccgtggcctctgcccccgcctcctcctcctccgcc
gctgggaagaaggcgaagcgtttcgagatcaagaagtggaacgccgtctccctctgggcc
tgggacatcgtggtggacaactgcgccatctgccgcaaccacatcatggacctctgcatc
gagtgccaggcgaaccaggcgagcgccaccagtgaggagtgcaccgtcgcttggggagtt
tgcaaccacgcattccacttccactgcatcagccgttggctcaagacccgtcaagtgtgc
cctctagacaacagcgagtgggagttccagaagtatggtcactag

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