Phragmites australis (common reed): 133921090
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Entry
133921090 CDS
T10575
Name
(RefSeq) isoleucine--tRNA ligase, chloroplastic/mitochondrial
KO
K01870
isoleucyl-tRNA synthetase [EC:
6.1.1.5
]
Organism
paua Phragmites australis (common reed)
Pathway
paua00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
133921090
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
paua01007
]
133921090
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
paua03016
]
133921090
Enzymes [BR:
paua01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.5 isoleucine---tRNA ligase
133921090
Amino acid related enzymes [BR:
paua01007
]
Aminoacyl-tRNA synthetase
Class I (U)
133921090
Transfer RNA biogenesis [BR:
paua03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
133921090
Prokaryotic type
Other AARSs
133921090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
zf-FPG_IleRS
tRNA-synt_1_2
tRNA-synt_1e
Motif
Other DBs
NCBI-GeneID:
133921090
NCBI-ProteinID:
XP_062221809
LinkDB
All DBs
Position
6:complement(2878987..2892908)
Genome browser
AA seq
1055 aa
AA seq
DB search
MDAASCCRVFSAQRCRFPLRRLAAPPRPFCTESGGLAAPSISKRRSRGPVMAAKKAAQGA
KQEDGKYKHTVDLPRTTFGLRANSVVREPELQKLWEENQVLKRVSERNTGAKFVLHDGPP
YANGDLHMGHALNKILKDIINRYKLLQNHKVSFVPGWDCHGLPIELKVLKSMDKETLNAL
TPIKLRQKAAKFAKATVDAQMKSFKRYGVWADWENPYLTLSPEYEAAQLEVFGQMVMKGY
IYRGRKPVHWSPSSRTALAEAELEYSENHISRSIYAAFKITNPSKSGLLDEFLPNVCLVI
WTTTPWTIPANAAVAVNPELTYTVVEVQSAPESESMSGGKQRKVGSILSSEENKLFVIVA
SDLVSTLETKWGVKLVVQKSFPGSALEHCRYIHPVNGDECSVVLGGDYITTESGTGLVHT
APGHGQEDYLTGLKYGLPIISPVDDEGNFTAEAGQFCGLSVLGAGNAAVVKYLDEQQSLI
LEESYKHKYPYDWRSKEPTIFRATEQWFASVDGFRSAAMDAIRRVNWVPSQAENRIVAMT
SSRSDWCISRQRTWGVPIPVFYHVDSQEPLITEETIEHIKAIVSKKGSDAWWYMTTEELL
PDKYRDRASEYRKGTDTMDVWFDSGSSWAAVLAKRDGLNFPADIYLEGSDQHRGWFQSSL
LTSIATTGKAPYRSVITHGFVLDEKGFKMSKSLGNVVDPEKMIVGGKNLKEEPGYGADVL
RLWVSSVDYAGDVLIGPQILRQMSDMYRKLRGTMRFLLSNLHDWKPENSVPYNDLPKIDK
YALFQLENVVASMKDSYENYQFYKIYQMLQRFAIVDLSNFYFDVAKDRLYVGGRVSFTRK
SCQTVLAAHLLYLVRSIAPIMPHLAEDVWQNLPFEYTLQDGSLAMFVFDLKWPEKNERWL
SVPKDDVDFLSVILELRSEVNKILENARTGKLIGSSLDAKVYLHAESMDTMSKLKELSSA
SNDADALHRLFITSQVEVLPCLNEETTSSVSYTGKFSDLRTGDIWIGVTRADGAKCERCW
NYTRDVGSFHDHPTLCARCHDVIDLQPQPAAAAVS
NT seq
3168 nt
NT seq
+upstream
nt +downstream
nt
atggacgccgcctcatgctgccgcgtcttctccgcgcagcggtgccgcttcccgctccgc
aggctggcggcgccgccgcggccgttctgcaccgagtcgggcgggctcgccgccccatcg
atctcgaagcggcggtccagggggcccgtcatggcggcgaagaaggcagcgcagggtgcg
aaacaagaggatggaaaatacaagcacactgtggatctcccaagaacaacctttgggttg
agagcgaattctgttgtacgggagccagagctccagaaattatgggaggagaatcaggtt
ctgaaaagggtttctgaaaggaacactggggctaaatttgttctccatgatggccctcct
tatgctaatggtgatcttcatatgggccatgcgttgaataaaatcctcaaagatattata
aatcgatacaagctgcttcagaatcacaaagtgtcttttgttcctgggtgggactgccat
ggcttaccgatagaactaaaagttctgaagtcaatggataaggaaactttgaatgccctg
acacccataaaattaaggcaaaaagctgcaaaatttgctaaagcaacagttgatgcacaa
atgaaatctttcaagcggtatggtgtgtgggcagattgggagaacccttacctcactctg
tcaccagaatatgaagctgctcagttggaagtgtttggtcaaatggttatgaaaggatat
atctatagaggacgaaagcccgtccattggagtccgtcatcgcgtacagctttagcagaa
gctgaactggagtattcggaaaatcacatttccagaagcatatatgctgcgttcaagatt
accaatccatctaagtctgggttgctagacgaatttcttccaaatgtatgtttagtcata
tggaccactactccatggacgattccggctaatgctgctgttgctgtgaacccggagctt
acttacacagtagttgaggtacagtctgcaccggaaagtgagtcaatgtctggcggtaaa
caacgaaaagttgggagtattttgagttctgaagaaaacaaactctttgttattgtggct
tctgatcttgtctcaactcttgagaccaaatggggtgtgaagcttgtagtccagaaatca
tttcctggatcagccttggagcactgcaggtatatccatcctgtgaatggtgatgaatgt
tctgttgttcttggaggagattatataacaactgaatctggaacgggtcttgttcatact
gcccctggccatggccaggaagactacctaacaggtttgaaatatgggcttcctatcatt
tctcccgtggatgatgaaggaaatttcactgctgaagctggacagttctgtggtttgtct
gtcttgggagctggcaatgctgcagttgtcaagtatctggatgaacaacagtcacttatt
ttagaagagtcttacaaacacaagtacccctatgactggagatctaaagaaccaacaata
ttccgagcaactgaacagtggtttgcatctgtggatggttttcgcagtgctgcaatggat
gcaattagacgagtaaattgggttccttctcaggctgaaaacaggattgttgccatgacc
tccagccgttctgattggtgtatttcacggcagagaacttggggtgttcctattcctgtt
ttttaccatgtggactcacaagaacctctaataactgaagaaactattgaacatatcaag
gctattgtgtcaaagaaaggtagtgatgcatggtggtacatgacaactgaggaacttctt
ccagataaataccgggacagagcatctgagtatcgcaagggaactgatacaatggatgtt
tggtttgactctggttcctcatgggctgctgttttagcaaaaagagatggtcttaatttt
ccagcggatatatatcttgaaggttcagaccaacatcgtggatggtttcaaagctcattg
ttgaccagcattgctactaccggaaaggctccataccgtagtgttattacacatggtttt
gtcttggatgaaaagggttttaaaatgagcaaatctcttggtaacgttgtggacccggag
aaaatgattgttggtgggaaaaacctaaaggaagaacctggctacggagcagatgttctc
cgtctgtgggtttctagtgttgattatgctggcgatgtgttgattggtccacaaatcttg
cgccagatgtctgacatgtatagaaaactacgaggcacaatgcgatttctgttgtcgaat
ctccacgattggaaaccagagaattcagtgccctacaatgatctaccgaaaatcgacaag
tatgcacttttccaactggaaaatgttgtggcttccatgaaggacagttatgaaaactac
cagttctataaaatatatcagatgctacaaagatttgctattgttgatttgtccaacttc
tattttgatgttgcgaaggatcgactttatgttggaggtcgagttagcttcacaaggaaa
agctgtcaaacagtcctcgctgcacatttactctaccttgttaggtctattgcgccaatt
atgcctcacttagctgaggatgtttggcagaacctaccctttgaatacaccttgcaggat
ggatcccttgcaatgtttgtcttcgacctaaaatggccggaaaagaatgaaagatggctc
tcagttccgaaggatgatgttgactttctaagtgttatccttgagttgaggtcagaggtg
aacaaaattttggagaatgctcgcacaggaaagctgattggttctagcttagatgcaaag
gtttatctccatgctgaaagtatggatacgatgtcaaagctaaaagagctatcttctgca
tctaatgatgcagatgctctgcatcgcttatttatcacatctcaggtggaggttctccca
tgcctaaatgaagaaactacatcatctgtatcttacacaggaaagttcagtgacctgcgc
actggagacatatggattggtgtaactcgtgcggatggtgcaaaatgtgagaggtgttgg
aattacacccgggacgttgggtctttccatgatcaccctactctgtgcgcgcggtgtcac
gatgtcattgatttgcagccacaacctgctgctgcagctgtcagttaa
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