KEGG   Phragmites australis (common reed): 133925838
Entry
133925838         CDS       T10575                                 
Name
(RefSeq) putative DNA glycosylase At3g47830
  KO
K10773  endonuclease III [EC:3.2.2.- 4.2.99.18]
Organism
paua  Phragmites australis (common reed)
Pathway
paua03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:paua00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    133925838
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:paua03400]
    133925838
Enzymes [BR:paua01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     133925838
DNA repair and recombination proteins [BR:paua03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     133925838
 Prokaryotic type
     133925838
SSDB
Motif
Pfam: HhH-GPD
Other DBs
NCBI-GeneID: 133925838
NCBI-ProteinID: XP_062227571
LinkDB
Position
8:complement(10047575..10048977)
AA seq 189 aa
MPRKPKPKTPPSPARRDPSPEPYPSHGSPSPAQCLAVRDSLLAFHGFPEEFAPFRLLRLG
RSPEEDSGGPRPPTVLDGLVTTLLSHNTTDAISRRAFASLKAAFPSWDQVVDEEGKSLED
SIRCGGLAATKAARIRAILRGVRKRSSKICLEYLRELSVDEVKRELSQFKCIGPKTVSLI
SYLLLFSFQ
NT seq 570 nt   +upstreamnt  +downstreamnt
atgccgcgcaagcccaagccaaagactcccccctctccggcgaggcgggacccttcgccg
gaaccctacccttctcatggctccccatccccggcgcaatgcctcgccgtccgcgactcc
ctcctcgccttccacggcttccccgaggagttcgcgcccttccgcctcctccgccttggc
cgctcgccggaggaggatagcggtggccctcggcctcccactgtacttgacgggctcgtt
accaccctactctcccataacaccaccgacgccatctcccgccgcgccttcgcctccctc
aaggccgcgttcccctcctgggaccaggtggtggatgaggaggggaagagcctggaggac
tccatccgctgcggcggcctggcggcgacgaaggcggcgaggatacgggcgatactgagg
ggagtaaggaagcggagtagcaagatttgcctcgagtacctgcgggagctgtctgtggat
gaggtgaagagggagctctcgcagttcaaatgtattgggccaaagaccgtgagtttgatt
tcttatcttcttcttttcagttttcagtaa

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