Phragmites australis (common reed): 133927108
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Entry
133927108 CDS
T10575
Name
(RefSeq) isoleucine--tRNA ligase, cytoplasmic-like
KO
K01870
isoleucyl-tRNA synthetase [EC:
6.1.1.5
]
Organism
paua Phragmites australis (common reed)
Pathway
paua00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
133927108
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
paua01007
]
133927108
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
paua03016
]
133927108
Enzymes [BR:
paua01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.5 isoleucine---tRNA ligase
133927108
Amino acid related enzymes [BR:
paua01007
]
Aminoacyl-tRNA synthetase
Class I (U)
133927108
Transfer RNA biogenesis [BR:
paua03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
133927108
Prokaryotic type
Other AARSs
133927108
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
DUF5915
Anticodon_1
tRNA-synt_1g
tRNA-synt_1e
HVO_A0114
Motif
Other DBs
NCBI-GeneID:
133927108
NCBI-ProteinID:
XP_062229394
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All DBs
Position
8:32396539..32410679
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AA seq
1171 aa
AA seq
DB search
MDDVCEGKDFSFPAQEERVLQLWSQLDAFHEQLRRTEGGEEFVFYDGPPFATGLPHYGHI
LAGTIKDVVTRHQSMRGRHVSRRFGWDCHGLPVEFEIDKALGITNRQQVLDLGIGKYNET
CRSIVTKYVAEWEAIITRSGRWIDFKNDYKTMDLNFMESVWWVFAQLWEKDLVYKGFKVM
PYSTGCKTALSNFEAALDYRTVPDPAVMISFPIVGDPDNAALVAWTTTPWTLPSNLALCV
NANLMYAKVKDKSNGAVYVVAESRLGQLPVKAKASGKKQPSSKGSNAEAVPDGFDKESYE
LLAKIPGSSLVGLKYTPLFDVFTEFQDTAFRVIADNYVTDDSGTGVVHCAPAFGEDDHRV
CLAAGIIEATGLVVAVDDDGCFTEKVSEFKGRHVKEADKDIISAVKDKGRLVSKGSIEHS
YPFCWRSGTPLIYRAVPSWFVKVEKIKEQLLECNKETYWVPDYVKEKRFHNWLEGARDWA
VSRSRFWGTPLPLWTSQDGEEIVVMDSIEKLEKLSGVKVTDLHRHYVDDITIPSRRGPEY
GVLKRVEDVFDCWFESGSMPYAHIHYPFENCELFEKNFPGNFVAEGLDQTRGWFYTLMVL
STALFGKPAFKNLICNGLVLAEDGKKMSKSKKNYPAATELMDEYGADALRLYLINSPVVR
AESLRFKRSGVYGVVKDVFLPWYNAYRFLVQNAKRLEVDGFAAFSPIDQATLLKSSNVLD
HWINSATESLVSFVHQEMDAYRLYTVVPYLVKYIDNLTNIYVRFNRKRLKGRTGEEDCGI
SLSTLYHALVTTCVAMAPFTPFFTEVLYQNLRKVLSKSEESIHFCKFPSTSGERDERVEQ
SVNRMMTIIDLARNIRERHNKALKTPLKEMVVVHPDNEFLEDITGKLKEYVMEEMNVKTV
TPCNDPLMYSSLRAEPNFSVLGKRLGKDMGKVSSEVKKMTQEQILAFEKHGEISFFGHCL
KLDDIKVVRQFKRPENVSEKEIDAAGDGDVLVILDLRADQSLFEAGVAREVVNRIQKLRK
TAQLEPTDPVDVYYKPADNEKNTLEEILKSQDQYIRETLGSSLVPKEMAPSDVVVICEES
HNVHDMSFVIYIARSAPVLSPDLPHASGNSDHVEALRVYLLSRSISRLKNEFHAGNGMIT
VDCIEGYPPISLQLGKHVFFSVGDFYLASRS
NT seq
3516 nt
NT seq
+upstream
nt +downstream
nt
atggatgacgtgtgcgaggggaaggatttctccttccccgcgcaggaggagcgggtgctc
cagctgtggtcgcagcttgacgccttccacgagcagctccgccgcacggagggcggcgag
gagttcgtattctacgacggcccgcccttcgccaccggcctcccccactacggccacatc
ctcgccggcaccatcaaggacgtggtcacccgccaccagtcaatgcgcggccgccacgtc
tcgcgccgcttcggatgggactgccacggcctccccgttgagttcgagatcgacaaggcg
ctcggcatcaccaaccggcagcaggtgctcgacctcggcatcggcaagtacaacgagact
tgccgcagcatcgtcactaagtacgtcgccgagtgggaggccatcatcacgcgctcgggg
aggtggattgacttcaagaacgactacaagaccatggacctcaacttcatggagagcgtc
tggtgggtgtttgcacagctctgggagaaggacctcgtctacaagggtttcaaggtgatg
ccttacagcacaggctgcaaaactgcactgtcaaactttgaggcagcgctggactatagg
actgttccagacccagcggtgatgatatctttccctattgttggtgatccggacaatgca
gctcttgttgcatggactacaacaccttggacacttccgagtaacctagcattgtgtgtc
aatgccaaccttatgtatgccaaggttaaagacaagtcaaatggagcagtatacgttgtt
gcggaatctaggcttggtcaattgccagtgaaggccaaagcttcaggaaagaagcaacca
tcttctaagggaagcaacgctgaagctgttccggatggtttcgataaggaatcatatgaa
ttattggcaaagattcctggttcatccttagttggcctaaaatacactcccctgtttgat
gttttcacggagtttcaagatactgcctttagagtgatcgcggataactatgtaaccgat
gatagtggaactggtgttgtccactgtgctcctgcttttggtgaagacgaccatcgtgtt
tgccttgctgctgggataattgaggctactggacttgttgttgctgttgatgatgatggt
tgctttacagaaaaagtatctgagtttaaagggcgacatgtcaaagaagccgataaggat
atcatcagtgctgttaaggataaaggaagacttgttagtaaagggagcatcgaacactct
tatccattttgttggcgctcgggtactcctcttatttatcgggctgttccaagctggttt
gtcaaggttgagaagattaaggaacagttgctggaatgtaacaaggagacctattgggtg
cctgattatgttaaggaaaaaagattccataactggcttgaaggcgcccgtgattgggct
gttagcagaagtagattctggggtactccacttccactgtggaccagccaagatggtgaa
gaaattgttgttatggattcgattgagaaactagaaaaattatctggtgtcaaggtcacg
gatcttcaccgacactatgttgatgatattacgattccctctaggagaggacccgagtat
ggggtgctcaaacgtgttgaggatgtttttgactgctggttcgagagtgggtccatgcca
tatgcccacattcattatccattcgagaattgtgaactatttgaaaagaattttcctggc
aatttcgtggcagagggtttggatcagacacgaggatggttctatactctgatggtgctc
tcaacagcactgtttgggaagcctgcatttaagaatcttatatgcaatggtcttgtcttg
gctgaggatggtaagaaaatgagcaagagtaaaaaaaattatcctgcagccacagagctc
atggatgagtatggagcggatgctttgagactatatttgataaattctccagttgtacgt
gcagagtctctacgatttaaacgtagtggtgtttatggtgttgtgaaagatgtcttcctc
ccgtggtataatgcttatagatttcttgtccaaaatgcaaagagacttgaagttgacggt
tttgctgcattttctccaattgatcaagcgacccttctgaagtcatccaatgtgttagat
cactggataaactctgcaactgaaagtctagtcagctttgttcaccaggagatggatgca
tatcggctttacacggttgtgccatatttggtaaaatacattgacaatcttactaacata
tatgtgcgtttcaaccgcaaacggttaaaaggacgtactggagaagaagactgcggaatt
tctctctcaacgctctaccatgcacttgtaacaacttgtgtggcgatggctccatttaca
cccttctttactgaagttctttatcaaaatctgcggaaagtgttaagtaagtcagaggag
agcattcatttctgcaagttcccttctacaagtggggagagagatgagcgtgttgagcaa
agtgtaaataggatgatgaccatcattgatcttgcacgcaatattcgtgagcggcataac
aaagctctcaaaacaccactcaaggagatggtggttgtgcatccagacaatgaatttctt
gaagacatcactgggaaactaaaagagtatgttatggaggagatgaatgttaagactgtc
actccatgtaatgaccccttaatgtattcttccctgcgggctgaacccaatttcagcgtg
ctaggcaaaagattaggaaaagacatgggcaaagtatcaagtgaggtgaagaaaatgact
caggaacagatcttagcctttgagaaacatggagagatttcattctttggtcattgcttg
aagctagatgatattaaggttgtccgacaattcaagcgtcctgaaaatgtgtcagagaag
gagattgatgctgcaggagatggtgatgttttagtcattttagatctacgagctgatcaa
tcattgtttgaagctggagttgctcgagaggttgtgaacagaatccaaaagttacggaag
actgctcagctcgaacctactgatccagttgatgtgtattacaaacctgcggacaatgag
aaaaatacgctggaagagattttgaagtcacaggatcagtatattagagagacacttggt
tcatcactcgttccgaaggaaatggcaccatcagatgtggtagtaatttgcgaggagtca
cacaatgtacatgacatgtcgtttgtcatatacattgcaaggtccgcccctgtgctttca
ccagatcttcctcatgcctcaggcaacagtgaccatgtggaggcgttgagagtatatctt
ttgtcaaggtctatttccagattgaagaacgagtttcatgctggaaatggcatgattacg
gttgactgcattgaaggttatccaccaatcagcctacaactaggaaaacatgtttttttt
agtgtaggggatttctatttggctagtcgatcctga
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