Phragmites australis (common reed): 133927399
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Entry
133927399 CDS
T10575
Name
(RefSeq) uncharacterized protein LOC133927399
KO
K12173
BRCA1-A complex subunit BRE
Organism
paua Phragmites australis (common reed)
Pathway
paua03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
133927399
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
paua04121
]
133927399
03036 Chromosome and associated proteins [BR:
paua03036
]
133927399
03400 DNA repair and recombination proteins [BR:
paua03400
]
133927399
Ubiquitin system [BR:
paua04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
133927399
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
BRISC complex
133927399
Chromosome and associated proteins [BR:
paua03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
BRISC complex
133927399
DNA repair and recombination proteins [BR:
paua03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-A complex
133927399
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRE
Motif
Other DBs
NCBI-GeneID:
133927399
NCBI-ProteinID:
XP_062229841
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All DBs
Position
8:complement(36987793..36992992)
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AA seq
388 aa
AA seq
DB search
MSVSVTAAAPASTSGAPLAPLIAAQLNYLLSHSKLPFRVGQIWSGCRDGRYADRFTLGIP
FCLDYVHWDFVYNALYPKVAPDVVFGPEDEGFQPLVDYVEAGNGDKSCLARWDCRDPGGL
LALVEELRELYIAYQKKRVAEVDDARLTFELSTVLSKEGIEVCMVPPTDRPDEVKFAVPL
LDLDFAKLVPGCPWRLPQKIHLQVIFPICRRVTSVPSAPRLKLISTADLKSLFSVEDVKL
PPWLNGMCLAEYLPSLEENLKMQIVEASASIGSRRRFIEALAPTFGRPLEADPTFCRRAT
VLSISGIFTFLVHFAIPLQFPKQQPVLTLQSCQHCKADGLPIMSPPMNGYPWSPRWDPTE
MVERIYDFVTDECQNFKKVCSDAITQQK
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtgtccgtcaccgccgccgcgccggcctccacctccggcgccccgctcgcgcct
ctcatcgccgcgcagctcaactacctcctctcccactccaagctccccttcagggtgggg
cagatctggtccggctgccgcgacggccgctacgccgatcgcttcacgctcgggatcccc
ttctgcctcgactacgtccactgggatttcgtgtacaatgcactgtaccccaaggtggcg
cccgacgtggtgttcgggccggaggacgaggggttccagccgctggtcgattatgttgag
gctggaaatggtgataagagttgcttggcgcgttgggattgccgcgaccccgggggactc
ctcgccctcgtagaggagctccgggaattgtacattgcataccaaaagaagcgggttgcc
gaagtggatgatgcaagactaacgtttgaattgagcacagttctctctaaggagggaatc
gaagtctgcatggtaccacccactgataggccagatgaggtgaaatttgctgtcccactt
ctggacttggactttgccaaactggtgccaggatgtccttggagattacctcaaaagatc
catctacaggtcatatttccaatctgcagaagagtaacttctgttccttctgctccacga
ctcaaactaatctctacagcagatttaaagtcacttttctcagtggaggatgtgaagctc
cctccatggttaaatgggatgtgcttggcagagtatcttccttccttagaagaaaatctt
aaaatgcagattgtggaagcatcagcttcaattggttccagaagacgttttattgaggca
ttggctcctactttcgggcgaccattagaggctgatccgactttttgcaggagagctaca
gttctttctatttcagggattttcacatttctggttcactttgccatcccccttcaattt
ccaaagcaacaacctgtcctcacattgcagagttgtcagcactgtaaagccgatgggtta
cccattatgtcacctccgatgaatggctatccctggagtcctagatgggatccaactgaa
atggtggaacggatctacgacttcgtgaccgacgagtgccagaatttcaagaaggtctgc
agtgatgctatcactcagcagaagtag
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