KEGG   Phragmites australis (common reed): 133930552
Entry
133930552         CDS       T10575                                 
Name
(RefSeq) putative DNA glycosylase At3g47830
  KO
K10773  endonuclease III [EC:3.2.2.- 4.2.99.18]
Organism
paua  Phragmites australis (common reed)
Pathway
paua03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:paua00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    133930552
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:paua03400]
    133930552
Enzymes [BR:paua01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     133930552
DNA repair and recombination proteins [BR:paua03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     133930552
 Prokaryotic type
     133930552
SSDB
Motif
Pfam: HhH-GPD USP47_C hnRNP_Q_AcD
Other DBs
NCBI-GeneID: 133930552
NCBI-ProteinID: XP_062233199
LinkDB
Position
10:27819400..27824383
AA seq 279 aa
MPRKPKRKHPSSPARRDPSPGPYPSHASPSPAQCLAVRDALLAFHGFPEEFAPFRLLRLG
RSPEDDNCDPPPPTLTPTVLDGLVTTLLSQNTTDAISRRAFASLKAAFPSWDQVVDEEGK
RLEDAIRCGGLAATKAARIRAMLRGVRERRGKICLEYLRELSVDEVKRELSQFKGIGPKT
VACVLMFYLQKDDFPVDTHVIRITKAMGWVPSTASREKAYIHLNNKIPDDLKFDLNCLFV
THGKLCQSCTKKVGAEKSEGPKSVCPLASYCCVGEKLQQ
NT seq 840 nt   +upstreamnt  +downstreamnt
atgccccgcaagcccaagcggaagcatccgtcctcgccggcgaggcgcgacccttcgccg
ggaccctacccttctcacgcatcaccctccccggcgcaatgcctcgccgtccgcgacgcc
ctcctcgccttccatggcttccccgaggagttcgcgcccttccgcctcctccgtctcggc
cgctcgccggaggatgataactgtgaccctccgcctccgactctgactccgaccgtcctc
gacgggctcgtcaccaccctgctctcccagaacaccaccgacgccatctcccgccgcgcc
ttcgcctccctcaaggccgccttcccctcctgggaccaggtggtggatgaggaggggaag
cggctggaggacgccatccggtgcggcggcctagcagcgacgaaggcggcgaggatacgg
gcgatgctgaggggcgtgagggagcggagaggtaagatttgcctcgagtacctgcgggag
ctgtccgtggatgaggtgaagagggagctctcgcagttcaaagggatcgggccaaagacc
gtggcatgtgtgctgatgttctatcttcagaaggatgactttccagtagatactcatgta
atccgcattacgaaagctatgggttgggttccttcaacagctagccgggagaaggcgtac
attcatctaaataataagattcctgatgatctgaagtttgatttgaattgtctttttgta
actcatgggaagctttgccaatcatgtaccaaaaaggtgggagccgagaaaagcgagggc
cccaaatctgtctgtcctctagcaagttactgctgtgttggagaaaagcttcagcaatag

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