Phragmites australis (common reed): 133930641
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Entry
133930641 CDS
T10575
Name
(RefSeq) probable DNA helicase MCM9
KO
K10738
DNA helicase MCM9 [EC:
5.6.2.4
]
Organism
paua Phragmites australis (common reed)
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
paua03032
]
133930641
03400 DNA repair and recombination proteins [BR:
paua03400
]
133930641
Enzymes [BR:
paua01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
133930641
DNA replication proteins [BR:
paua03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
133930641
DNA repair and recombination proteins [BR:
paua03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
133930641
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MCM
MCM_OB
MCM_lid
Mg_chelatase
AAA_5
AAA
MCM_N
FtsK_SpoIIIE
AAA_16
AAA_22
RuvB_N
AAA_19
Motif
Other DBs
NCBI-GeneID:
133930641
NCBI-ProteinID:
XP_062233313
LinkDB
All DBs
Position
10:complement(29847325..29861314)
Genome browser
AA seq
672 aa
AA seq
DB search
MSHRPFPAQMPPPQEEASDDDGGETQVRELASFLRKFYSDDLRILLDAEPTEHFPLVVEF
AELMDFDPKFANELYSRPGKPLRVLDRAAQCAQREMIEESGNLKTEAHEFVHVRIDVSGS
PLEFPEASPSIGKVKVKHMGTLLTLKGTVIRSGGVKMIEYERDYMCRKCKYRFKVYPDME
AGNRINLPASCPSKSSRGCASASFQFIEDSIICHDYQEIKIQENVQLLGVGSIPRSMPVI
LMDDLVDIVKAGDDVIVTGILSAKWSPDIKDVRSNLDPMLVANYVRGTNELKSDIEIPDE
TIKEFEHFWEEHKDTPLKGRNLILKGICPQIFGLFTVKLAVALTLIGGVQHVDASGTKVR
GEPHMLLVGDPGTGKSQFLKFAAKLSNRSVITTGFGSTSAGLTVTAVKDGGEWMLEAGAL
VLADGGLCCIDEFDSMREHDRTTIHEAMEQQTLSIAKAGLVTTLSTRTTVFGATNPKGQY
DSNECLSVNTTLSGPLLSRFDIVLVLLDRKIAEWDKIVSLHILNEHSDEKKDKTNDSELK
WTLPQLRRYINHVKKRFKPVLTKEAERVISSYYHRQRQSGTQNAARTTVRMLESLIRLAQ
AHARLMFRNEVEQLDAIAAILCIESSKTTSAIVDSAGDALHSIFTDNPDEEYNTQAKIIL
MELGLVKGSPLS
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
atgtcccatcggccctttcccgcccaaatgccgccgccgcaggaggaggcctccgacgac
gatggcggagagacgcaagtgcgtgagctcgcgagcttcctccgcaaattctattccgac
gacctccgcatcctcctcgacgccgagcccaccgagcacttccccctcgtcgttgaattc
gccgagctcatggacttcgaccccaagttcgccaacgaactctactcccgtcctggcaag
cccctccgcgtcctcgacagggccgctcaatgcgcccagcgtgagatgattgaggaatcg
ggtaatttgaagaccgaagcgcatgagttcgtgcacgtacgcatcgacgtctccggatcg
ccactagagttccctgaggcgtccccgagtattgggaaggtgaaggtaaagcacatgggg
actttgctcactctgaaagggactgtgatcagatcaggtggtgtcaagatgatagagtac
gagagggattacatgtgcaggaagtgcaagtacaggttcaaggtttatcctgatatggag
gctgggaatcgtataaaccttcctgcatcttgcccatccaagagttcaagaggttgtgca
agtgcttctttccagtttatagaagatagcataatctgccatgattatcaagaaataaag
atccaagaaaatgtacaacttctgggtgttgggtctataccccgttcaatgcctgtaatc
ttgatggatgaccttgtagatatcgttaaagctggagatgatgtcattgttacgggtata
ttatctgccaagtggtctcctgatattaaggatgtgcgttccaaccttgatcctatgttg
gttgctaattatgtgaggggaacaaatgagctgaagtctgatatagaaatccctgatgaa
actatcaaggagtttgagcatttctgggaagagcacaaagatactcccctaaaaggaaga
aatttaatcttgaaaggcatatgtcctcaaatttttgggctattcacggtgaagcttgca
gttgctcttacattaattggtggagtgcagcatgttgatgcttctggaacaaaggttcgc
ggagaaccacatatgcttcttgttggtgatccaggtactggtaaatcccagtttttgaag
tttgctgctaaattgagcaaccgttctgtgataacaactggttttggaagcaccagtgct
gggttaactgtcacagctgtcaaggatggaggggagtggatgcttgaggctggtgctctt
gttctggctgatggtggtttatgctgcatagatgaatttgacagcatgcgagagcatgac
agaacaacaatacatgaagccatggagcaacaaacattaagcattgcaaaggctggacta
gtgacaacactcagtacaaggactactgtctttggtgccacgaatccaaaagggcaatac
gattctaatgaatgcttatctgtgaatacaacactttcaggaccactgttgagtagattt
gatatagttcttgttctcttggatagaaagatcgctgaatgggataagatagtttcactc
catatactaaatgagcactcggatgaaaagaaagacaagacaaatgattctgaactaaag
tggacgctcccccagttgagaaggtatatcaatcatgtaaagaaacgatttaaaccagtg
ctgacaaaggaggcagaaagagttatctcaagctattatcatcggcagcgacagtcagga
acacagaatgcagcaaggactactgtgcgcatgcttgaaagtttgataaggctagcacaa
gcgcatgcaagactaatgttcagaaatgaggttgaacaacttgacgctattgctgccata
ttatgcattgaatcttccaagacaacatctgcaatagtagacagtgctggagatgctttg
cactctatttttactgataaccctgatgaggaatataacacacaggcgaagataatcctt
atggagcttggactagttaaaggctccccattatcctag
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