Propionibacterium australiense: NCTC13651_01571
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Entry
NCTC13651_01571 CDS
T06637
Symbol
ligA
Name
(GenBank) DNA ligase
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
paus
Propionibacterium australiense
Pathway
paus03030
DNA replication
paus03410
Base excision repair
paus03420
Nucleotide excision repair
paus03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
paus00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NCTC13651_01571 (ligA)
03410 Base excision repair
NCTC13651_01571 (ligA)
03420 Nucleotide excision repair
NCTC13651_01571 (ligA)
03430 Mismatch repair
NCTC13651_01571 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
paus03032
]
NCTC13651_01571 (ligA)
03400 DNA repair and recombination proteins [BR:
paus03400
]
NCTC13651_01571 (ligA)
Enzymes [BR:
paus01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
NCTC13651_01571 (ligA)
DNA replication proteins [BR:
paus03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
NCTC13651_01571 (ligA)
DNA repair and recombination proteins [BR:
paus03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
NCTC13651_01571 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NCTC13651_01571 (ligA)
MMR (mismatch excision repair)
DNA ligase
NCTC13651_01571 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
NCTC13651_01571 (ligA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_aden
OB_DNA_ligase
HHH_2
Nlig-Ia
BRCT
DNA_ligase_ZBD
HHH_5
PTCB-BRCT
HHH
Zn_Ribbon_1
DUF7575
Motif
Other DBs
NCBI-ProteinID:
VEH91015
LinkDB
All DBs
Position
1:complement(1775872..1778049)
Genome browser
AA seq
725 aa
AA seq
DB search
MSIDAAHDTVPAGDPAPEPMQAGPAQKRRHAELVGLVEDAQQAYYGRDAPVLTDAAYDAM
MVELEQLENDYPELRTPDSPTQRVGAGRALTDFAPVEHPQRMLSLDDVFSLDELGEWMSR
TIEALGHEPTWLCEVKVDGLAVDLQYEGGVLRTAATRGDGYVGEDITSNARTIEAIPHRL
AVSEAFPLPALVEARGEVFFPVEAFNAFNAELEQAGKQVFANPRNAAAGSLRQKDPSVTA
RRPLSMICHGIGVHTGLDVTRQSEVYEAFRAWGLPVSPYYECLGDRAAVLEFIARFGERR
HDLLHEIDGVVVKVDDLASQDMLGATSRAPRWAIAYKYPPEEVNTRLRDIRVNVGRTGRV
TPFGVMDPVRVAGSTVSMATLHNASEVRRKGVLIGDMVVLRKAGDVIPEIVGPVTEMRTG
AETEFVMPTHCPECGTELRPEQESDKDIRCPNQQHCPAQLRERLFSAASRAAFDIEALGV
EGAAALLGAGVLDNEARLFDLTAEDLVGVEFYTRAATKKEIAGEKPVPAPGVVNGRVLSA
VGTKLLANLDKAKQQPLWRVLVALSIRHVGPTAARALAARFGSLEAIRAASPEELAATEG
VGAVIAASLQAWFEVDWHQQIIDAWAAAGVRMSDETSGEPALEQTLAGLTVVVTGTLEEF
TRDGAKEAIVARGGKAAGSVSKKTDFVVVGANAGSKAAKAAELGRPVLDEAGFRVLLEKG
PQGLG
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atgagcatcgatgcagcccacgacaccgtcccggccggtgaccccgcccccgaaccaatg
caggccggcccggcccagaaacgtcgccacgccgagctcgtcggtctcgtcgaggacgcc
cagcaggcctactacggccgtgacgccccggtgctcaccgacgccgcctacgacgcgatg
atggtcgaactcgaacaactcgagaacgactacccggagctgcgcacccccgacagcccc
acgcagcgggtcggcgccgggcgggcgctcaccgacttcgccccggtcgagcacccccag
cggatgctcagcctcgacgacgtcttcagcctcgacgagctgggcgagtggatgtcccgc
accatcgaggcgctcggtcacgagcccacctggctgtgcgaggtgaaggtcgacggcctg
gccgtcgacctccagtacgagggcggcgtgctgaggaccgccgccacccgtggcgacggt
tacgtcggcgaggacatcacgtcgaacgcccgcaccatcgaggccatcccgcaccggctg
gccgtctccgaggcgttcccgctcccggccctcgtcgaggcccgcggcgaggtcttcttc
ccggtcgaggcgttcaacgccttcaacgccgagctggagcaggccggcaagcaggtcttc
gccaacccgcgcaatgccgcggccggttccctgcggcagaaggacccctcggtgacggcc
cgccggccgctgtcgatgatctgccacggcatcggtgtccacaccggactcgacgtcacc
cgacagagcgaggtctacgaggcgttcagggcctggggtctgccggtcagcccctactac
gagtgcctcggggaccgcgctgcggtgctcgagttcatcgcccgtttcggtgagcgccgc
cacgacctgctgcacgagatcgacggtgtcgtcgtcaaggtcgacgacctggccagccag
gatatgctcggcgccacgagccgcgccccccgctgggcgatcgcctacaagtacccgccc
gaggaggtcaacaccaggctgcgcgacatccgggtcaacgtcgggcgtaccgggcgggtc
actcccttcggcgtcatggacccggtgcgggtggccgggtcgacggtgtcgatggccacc
ttgcacaacgcctccgaggtcaggcgcaagggcgtgctcatcggcgacatggtggtcctg
cgcaaggccggcgacgtcatccccgagatcgtcgggccggtcaccgagatgcgcaccggg
gcggagaccgagttcgtcatgccgacccactgtcccgagtgcggcaccgagctgcggccc
gagcaggagtccgacaaggacatccgctgccccaaccagcagcactgcccggcccagctg
cgcgagcggctcttctccgcggcctcccgcgccgccttcgacatcgaggcgctcggggtc
gagggcgccgcggccctgctcggtgccggcgtgctcgacaacgaggcccggctgttcgac
ctgaccgccgaggacctggtcggggtcgagttctacacgcgcgccgccacgaagaaggag
atcgcgggcgagaaaccggtgcccgccccgggcgtcgtcaacggccgggtgctgtcggcc
gtcggcaccaaactcctcgccaatctcgacaaggcgaagcagcagccgctgtggcgggtg
ctcgtggccctgtccatccgccacgtcggccccaccgccgcgcgggcactggccgcccgg
ttcggctcgctcgaggccatccgcgccgcgagccccgaggaactggccgccaccgagggg
gtcggtgcggtcatcgccgcctcgctgcaggcctggttcgaggtcgactggcaccagcag
atcatcgacgcctgggccgccgccggtgtgcgcatgtccgacgagacgagtggtgaaccc
gccctcgagcagactctcgccgggctgaccgtcgtcgtcaccggcacgctcgaggagttc
acccgggacggcgccaaggaggcgatcgtcgcacgcggcgggaaggccgccggatcggtc
agcaagaagaccgatttcgtcgtggtcggcgcgaacgccgggtcgaaggcagccaaggcc
gccgagctcggccgcccggtgctcgacgaggccggtttccgtgtcctgctcgagaagggc
ccgcaggggctgggctga
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integrated database retrieval system
