Pseudonocardia autotrophica: Pdca_42100
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Entry
Pdca_42100 CDS
T06156
Symbol
mdh
Name
(GenBank) malate dehydrogenase
KO
K00024
malate dehydrogenase [EC:
1.1.1.37
]
Organism
paut
Pseudonocardia autotrophica
Pathway
paut00020
Citrate cycle (TCA cycle)
paut00270
Cysteine and methionine metabolism
paut00566
Sulfoquinovose metabolism
paut00620
Pyruvate metabolism
paut00630
Glyoxylate and dicarboxylate metabolism
paut00680
Methane metabolism
paut00710
Carbon fixation by Calvin cycle
paut00720
Other carbon fixation pathways
paut01100
Metabolic pathways
paut01110
Biosynthesis of secondary metabolites
paut01120
Microbial metabolism in diverse environments
paut01200
Carbon metabolism
Module
paut_M00009
Citrate cycle (TCA cycle, Krebs cycle)
paut_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
paut_M00012
Glyoxylate cycle
paut_M00168
CAM (Crassulacean acid metabolism), dark
paut_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
paut00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
Pdca_42100 (mdh)
00620 Pyruvate metabolism
Pdca_42100 (mdh)
00630 Glyoxylate and dicarboxylate metabolism
Pdca_42100 (mdh)
00566 Sulfoquinovose metabolism
Pdca_42100 (mdh)
09102 Energy metabolism
00710 Carbon fixation by Calvin cycle
Pdca_42100 (mdh)
00720 Other carbon fixation pathways
Pdca_42100 (mdh)
00680 Methane metabolism
Pdca_42100 (mdh)
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
Pdca_42100 (mdh)
Enzymes [BR:
paut01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.37 (S)-malate dehydrogenase (NAD+, oxaloacetate-forming)
Pdca_42100 (mdh)
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Gene cluster
GFIT
Motif
Pfam:
Ldh_1_C
Ldh_1_N
Motif
Other DBs
NCBI-ProteinID:
BBG03001
LinkDB
All DBs
Position
complement(4439481..4440467)
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AA seq
328 aa
AA seq
DB search
MSATPVTVTVTGAAGQIGYALLFRIASGQLLGSDTPVKLNLLEIPQAVKAAEGTAMELDD
SAFGLLRGIDIYDDAKAAFDGANVALLVGARPRTKGMERGDLLEANGGIFGPQGKAINDG
AASDIRVLAVGNPANTNALIAQAAAPDVPADRFTAMTRLDHNRALAQLAKKLGVGLDEIT
KLTIWGNHSATQYPDLFHAEVGGKIAAEQVEREWLENDFIPTVAKRGAAIIEARGASSAA
SAANAAIDHVYDWVNGTPAGDWTSAAIPSDGSYGVPEGLISSFPVTSENGEWKIVQGLEI
DEFSRSKIDASVAELGEERDAVQKLGLL
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
gtgtctgctaccccagttaccgtcaccgtcaccggagccgctggccagatcggttacgcg
ctgctcttccggatcgcctccggtcagctcctggggtccgacaccccggtgaagctgaac
ctgctggagatcccgcaggccgtcaaggccgccgagggcaccgcgatggagctcgacgac
tccgccttcggcctgctgcgcggcatcgacatctacgacgacgcgaaggccgccttcgac
ggcgccaacgtcgcgctgctggtcggcgcccgcccgcgtaccaagggcatggagcggggc
gacctgctcgaggccaacggcgggatcttcggcccgcagggcaaggccatcaacgacggc
gccgcgagcgacatccgcgtgctggccgtcggtaacccggccaacaccaacgccctgatc
gcccaggccgccgcgccggacgtcccggccgaccggttcaccgcgatgacccgcctggac
cacaaccgtgcgctggcccagctcgccaagaagctcggcgtcggcctcgacgagatcacc
aagctcacgatctggggcaaccactcggcgacccagtacccggacctgttccacgccgag
gtcggcggcaagatcgctgccgagcaggtcgagcgggagtggctggagaacgacttcatc
ccgaccgtcgccaagcgcggtgccgcgatcatcgaggcccggggcgcgtcctccgcggcg
tcggccgccaacgccgccatcgaccacgtgtacgactgggtcaacggcaccccggccggc
gactggacctccgccgcgatcccgtcggacggttcctacggcgtccccgagggcctcatc
tcctcgttcccggtcacctccgagaacggcgagtggaagatcgtccagggtctggagatc
gacgagttctcccggtcgaagatcgacgcgagcgtcgccgagctgggcgaggagcgcgac
gccgtgcagaagctcggcctgctctga
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integrated database retrieval system