Pseudonocardia autotrophica: Pdca_55800
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Entry
Pdca_55800 CDS
T06156
Symbol
kgd
Name
(GenBank) 2-oxoglutarate decarboxylase
KO
K01616
multifunctional 2-oxoglutarate metabolism enzyme [EC:
2.2.1.5
4.1.1.71
1.2.4.2
2.3.1.61
]
Organism
paut
Pseudonocardia autotrophica
Pathway
paut00020
Citrate cycle (TCA cycle)
paut00630
Glyoxylate and dicarboxylate metabolism
paut00785
Lipoic acid metabolism
paut01100
Metabolic pathways
paut01110
Biosynthesis of secondary metabolites
paut01120
Microbial metabolism in diverse environments
paut01200
Carbon metabolism
paut01210
2-Oxocarboxylic acid metabolism
Module
paut_M00009
Citrate cycle (TCA cycle, Krebs cycle)
paut_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
paut00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
Pdca_55800 (kgd)
00630 Glyoxylate and dicarboxylate metabolism
Pdca_55800 (kgd)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
Pdca_55800 (kgd)
Enzymes [BR:
paut01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.2 oxoglutarate dehydrogenase (succinyl-transferring)
Pdca_55800 (kgd)
2. Transferases
2.2 Transferring aldehyde or ketonic groups
2.2.1 Transketolases and transaldolases
2.2.1.5 2-hydroxy-3-oxoadipate synthase
Pdca_55800 (kgd)
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.61 dihydrolipoyllysine-residue succinyltransferase
Pdca_55800 (kgd)
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.71 2-oxoglutarate decarboxylase
Pdca_55800 (kgd)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
E1_dh
2-oxoacid_dh
OxoGdeHyase_C
Transket_pyr
2-oxogl_dehyd_N
Motif
Other DBs
NCBI-ProteinID:
BBG04371
LinkDB
All DBs
Position
5959332..5963213
Genome browser
AA seq
1293 aa
AA seq
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MSSSSTSHPAGEFGPNEWLVEEMYQRFQEDPSAVDAAWHEFFADYGKDGEQRPASGDSAD
DTGATDAASNGAAPKVRPGGVTRGSATEDDEGDDTASAPAQKAVENGTSTTGRASRSRDV
PPPVTPKAEPPPAEERLRTASSPSSNGSAKPAAGSSGSKAAKPSQDGGGATTTPLRGAAN
AIAKNMTASLQLPTATSVRAVPAKLLADNRIVINNHLKRTRGGKLSFTHLIGYALVKALA
DFPNMNRHFAETDGKPTVVTPEHVNLGLAMDMPGKDGSRTLIVVSIKGCENMSFAQFWSA
YEGMVRKARDGKLTAEDFSGTTISLTNPGTLGTNHSVPRLTVGQGAIIGVGAMEYPAAFQ
GASEERLAEFGVSKIITLTSTYDHRIIQGAESGDFLRRVHQLLLGESDFYDNVFASLRVP
YEPIRWVQDFPEGEVDKTARVLELIESYRTRGHLMADTDPLNYRQRRHPDLDVLSHGLTL
WDLDRDFAVGGFGGQTHMKLRDVLGLLRASYCRTIGTEYMHIADPEQRKWLEERIEVPHV
KPEASEQKYILSRLNAAEAFETFLQTKYVGQKRFSLEGGETVIPLLDAVLDKSAENELDE
VVIGMPHRGRLNVLANIVGKPISQIFREFEGNLDPGQAHGSGDVKYHLGAEGKYFRMFGD
GETTVSLTANPSHLEAVDPVLEGIVRAKQDLLDKGDGGFTVLPVLMHGDAAFAGQGVVAE
TLNLALLRGYRTGGTVHVVVNNQVGFTTAPEHSRSSQYCTDVAKMIGAPVFHVNGDDPEA
CVWVAKLAVEYRQRWNNDVVIDMICYRRRGHNEGDDPSMTQPSMYDIIDAKRSVRKIYTE
SLIGRGDITMDEAEQALKDFSNQLEHVFNEVRELEKTPPVISPSIEDVQQVPSDLDTSIP
LEILHRIGDVHETLPEGFAVHKRVEPVLRKRYTMSREGNIDWAFAELLAMGSLAVDGRLI
RLSGQDSRRGTFVQRHSVLIDRKTGAEYFPLRNLAENQGRFLPYDSALSEFAAVGFEYGY
SVANPEALVMWEGQFGDFVNGAQSIIDEFISSGEAKWGQLSDVALLLPHGLEGQGPDHSS
GRIERFLQLCAEGSMTVALPSEPANYFHLLRQHTLDGVRRPLVVFTPKWMLRAKQVVSQV
SDFTHGRFRPVIDDPEHREKNGPVTDVDRVLFCSGKIYWELAAARDKRRKNGDTSVDGVA
LVRVEQLYPMPIDQITETLERYPEAGDIRWVQEEPANQGSWPYYGLELPQKLPQLQGRFT
RVSRRRMAAPAAGSSKVHEVEQAELIDKAFSKS
NT seq
3882 nt
NT seq
+upstream
nt +downstream
nt
gtgtcatcgagcagtacctcccatccggcgggcgaattcggtcccaacgagtggctcgtc
gaggagatgtaccagcgcttccaggaggacccgtcggccgtggacgcggcctggcacgag
ttcttcgccgactacggcaaggacggtgagcagcgcccggcatccggtgattccgccgac
gacaccggcgcgaccgatgccgcgtccaacggtgccgcaccgaaggtgaggcccggcggg
gtcacccgtggctcggccaccgaggacgacgagggcgacgacaccgcgtcggcccccgct
cagaaggccgtcgagaacggcaccagcacgaccggccgggcctcccgttcgcgcgacgtc
ccgcccccggtcacgccgaaggccgagccgccacccgccgaggagcggctgcggacggcg
agttcgccgtcgtccaacggcagtgcgaagccggcggcgggcagcagcggctcgaaggcc
gcgaagcccagccaggacgggggtggcgcgaccaccaccccgctgcgtggcgccgcgaac
gccatcgccaagaacatgaccgcgtcgctgcagctgccgaccgcgacgagtgtgcgcgcg
gtgccggccaagctgctggccgacaaccgcatcgtcatcaacaaccacctcaagcggacc
cgcggtggcaagctctcgttcacccacctgatcggctacgcgctggtcaaggcgctcgcc
gacttcccgaacatgaaccggcacttcgccgagaccgacggcaagccgaccgtggtcacc
cccgagcacgtcaacctcggcctggcgatggacatgccgggcaaggacggcagccgcacg
ctgatcgtcgtgtcgatcaagggctgcgagaacatgtcgttcgcccagttctggtcggcc
tacgagggcatggtccgcaaggcccgggacggcaagctgaccgccgaggacttctccggc
accacgatcagcctgaccaacccgggcacgctgggcaccaaccactcggtacccaggctg
accgtcggccagggcgcgatcatcggcgtcggcgcgatggagtacccggccgcgttccag
ggcgcgtccgaggagcgactcgccgagttcggcgtcagcaagatcatcacgctgacgtcg
acctacgaccaccggatcatccagggcgccgagtccggcgacttcctgcgccgggtgcac
cagctgctgctcggcgagagcgacttctacgacaacgtcttcgcctcgctgcgggtcccc
tacgagccgatccgctgggtccaggacttccccgagggcgaggtcgacaagaccgccagg
gtgctggagctcatcgagtcctaccgcacccgcggccacctgatggccgacaccgatccg
ctcaactaccggcagcgccggcaccccgacctggacgtgctgagccacgggctgaccctg
tgggacctcgaccgcgacttcgcggtcggcggcttcggcgggcagacccacatgaagctg
cgcgacgtgctcggcctgctgcgggcgtcgtactgccgcacgatcggcaccgagtacatg
cacatcgcggatcccgagcagcgcaagtggctcgaggagcggatcgaggtaccgcacgtc
aagccggaggcgagcgagcagaagtacatcctgtcccggctcaacgccgcggaagcgttc
gagaccttcctgcagaccaagtacgtcgggcagaagcgcttctcgctggagggcggcgag
accgtcatcccgctgctggacgcggtgctcgacaagtccgccgagaacgaactcgacgag
gtcgtcatcggcatgccgcaccgtggccggctgaatgtgctggccaacatcgtcggcaag
ccgatcagccagatcttccgcgagttcgagggcaacctcgacccgggccaggcgcacgga
tccggtgacgtgaagtaccacctcggggccgagggcaagtacttccggatgttcggcgac
ggcgagacgacggtgtcgctcaccgcgaacccgtcgcacctggaggccgtcgacccggtg
ctcgagggcatcgtccgggccaagcaggacctgctcgacaagggcgacggcggtttcacc
gtgctgccggtcctgatgcacggcgacgccgcgttcgccggccagggggtggtcgccgag
acgctgaacctggcgctgctgcgtgggtaccgcaccggcggcaccgtgcacgtcgtggtc
aacaaccaggtcgggttcaccaccgcgccggagcactcgcgttcctcgcagtactgcacc
gacgtcgcgaagatgatcggcgcgccggtcttccacgtgaacggcgacgacccggaggcc
tgtgtctgggtcgccaagctggccgtcgagtaccggcagcgctggaacaacgacgtcgtg
atcgacatgatctgctaccggcgccggggccacaacgagggcgacgacccctcgatgacg
cagccgtcgatgtacgacatcatcgacgccaagcgcagtgtccggaagatctacaccgag
tcgctgatcggccgcggcgacatcacgatggacgaggcggagcaggccctcaaggacttc
tccaaccagctcgagcacgtcttcaacgaggtgcgcgagctggagaagaccccgccggtg
atctcgccgtcgatcgaggacgtgcagcaggtcccctccgacctggacacctcgatcccg
ctggagatcctgcaccggatcggcgacgtgcacgagacgctgcccgagggcttcgccgtg
cacaagcgggtcgagccggtgctccggaagcggtacacgatgtcccgcgagggcaacatc
gactgggcgttcgccgagctgctcgccatgggttcgctggccgtcgacggccggctgatc
cggctctccggccaggactcccggcgcggcaccttcgtgcagcggcactcggtgctgatc
gaccgcaagaccggcgccgagtacttcccgctgcgcaatctggccgagaaccagggccgg
ttcctgccctacgactcggcgctctcggagttcgcggcggtcggcttcgagtacggctac
tcggtcgccaaccccgaggcactcgtcatgtgggaggggcagttcggcgacttcgtcaac
ggcgcccagtcgatcatcgacgagttcatctcgtccggtgaggcgaagtggggccagctg
tccgacgtcgcgctgctgctgccgcacggcctcgagggccagggtcccgaccacagctcc
gggcgcatcgagcggttcctgcagctgtgcgccgagggctcgatgacggtcgcgctgccc
tccgagccggcgaactacttccacctgctccgccagcacaccctcgacggggtgcgcagg
ccgctggtggtgttcacgccgaagtggatgctgcgcgccaagcaggtcgtcagccaggtc
tccgacttcacccacggccggttccgcccggtgatcgacgacccggagcaccgcgagaag
aacggcccggtcaccgacgtcgatcgcgttctgttctgcagcggcaagatctactgggag
ctggccgcggcccgcgacaagcggcgcaagaacggtgacacctcggtcgacggcgtcgcg
ctggtgcgggtcgagcagctctacccgatgccgatcgaccagatcaccgagacgctggag
cgctaccccgaggccggcgacatccgctgggtccaggaggagccggcgaaccagggctcg
tggccgtactacggcctggagctgccgcagaagctcccccagctgcaggggcgcttcacc
cgggtgtcccggcggcggatggcggccccggccgccggttcgtcgaaggtgcacgaggtc
gagcaggccgagctgatcgacaaggcgttctcgaagagctga
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