Prunus avium (sweet cherry): 110756552
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Entry
110756552 CDS
T05161
Name
(RefSeq) LOW QUALITY PROTEIN: nuclear pore complex protein GP210
KO
K14314
nuclear pore complex protein Nup210
Organism
pavi
Prunus avium (sweet cherry)
Pathway
pavi03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pavi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
110756552
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pavi03019
]
110756552
Messenger RNA biogenesis [BR:
pavi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
110756552
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_GP210_15th
Ig_GP210_16th
RRM_1
Big_2
Ig_NUP210_7th
RRM_7
Ig_NUP210_1st
Ig_NUP210_2nd
Ig_NUP210_5th
Ig_NUP210_16th
Ig_NUP210_3rd
RRM_PARP14_3
Ig_NUP210_9th
Ig_NUP210_15th
SF3a60_bindingd
RRM_Nup35
Motif
Other DBs
NCBI-GeneID:
110756552
NCBI-ProteinID:
XP_021813689
UniProt:
A0A6P5SCT2
LinkDB
All DBs
Position
Unknown
AA seq
2305 aa
AA seq
DB search
MLSYTVLLGLFLLLMVDQTASHLSSGPHIADVNILLPPKMTHPVEYRLQGSDGIDVSGKT
SWDHHDILSVLPEYNSTSHCSTSARLRSIAPYSGRKETAVYAADVNTGAVIRCKVFIDKL
SRIQIFHNSIKLDLDGLATLRVRAFDSEENVFSSLVGLQFMWQLMPEPNVLPHHLVHVPL
KDSPLSDCGGLCGDLDIQINLEDNGVFSDLYVVKGIEIGHEIVSVHLLEPQFKHMTDKIV
LTVAEAMSLDPPSPVFVLVGAAVHYSLIIIRGNQAQVVNLPSPHHRWSVSNSSVARVDSM
MGLAYALNLGVTNTIVEDTRVAAHIQVSSLNVVLPDSLSLYMTPLSTSGDPVEGIKAIPS
MTRWYGVSGRRYLIQMKVFSEGPDAQEIYITESDDVKLSNNQSDYWRLFPVSDDIAIKHG
WQNSLILKATSQGQDKLTASLTYFSGLNETKEVLKVAQEVMVCDQVKFSLDKSASPTIFL
PWAPAIYQEVELQATGGCAKASSDYKWFSSDMGIVSMSASGVVQAKKPGKATIKVLSIFD
SFNYDEVVVEVSVPASMVMLLNFPVETVVGTHLQAAVTMKASNGAYFYRCDTFSSFIKWK
AGSESFIIVNATGESPALDSLGNADFHASNYGPPCSWAYIYASASGRATLHATLSKEYHN
FDSSFGGPIVLKASSLIAAYSPLSIRQAGDGNHFGGYFFDLALAETDKQLVKLDKIYLVH
GTHLDVMLLGGPEKWNNGWNNGVDFVETMEILNEQHGHIDNGASVERLYESYKGLYRISC
QMLGTYKIVFKRGNLVGDGHPLPAVAEVPLSLICSIPASIVLIVDEYVNEREVIQTAIQA
DRSSGRIRVTPATVANGRTIRLAAIGISNSGEAFANSSSLYLRWELISCNEMAKWDDADN
LERSEHSWERLLSLKNESGLCTVRATAIGFRDNMGGHKSVPLLDSSENVLADAIRLQLVS
TLMVSPEFNLVFFNPNAKLNLSITGGSCFLEAVVNDSRVLEVVQPPRGLQCSQLMLSPKG
MGTALVTVYDVGLAPPLAASAVVQVVDIDWIKIVSPEEISLMEGTSQTIDLMAGISDGRT
FDSYQFAYMNIHVHVEDHIIEVLDINDISSPGGGYVNVPKFKILATHLGITTFFVSAAQQ
SGHEILSQPIMVEVYAPPIIHPQDIFLVPGAAYVLTVKGGPTVGVYVEYMSMNGEIATMH
RSSGRLSAISPGNTTIRATVFRNGDTVICEAYGSVKVGVPSSVILNAQSELLGVGREMPI
YPLFSEGDLFSVYELCQNYQWTVEDDKVLSFNLLEHLNGEKYGTQLDPSEKIQFPSHMSE
EELGFIKVMFGRSAGRTNIAVSFSCEFISSGSKSWRRFYNASLSILVVPDLPLALGVPIT
WVLPPHYTTTSILPSSSESYGQRDSQSHKGTIIYSLLRNFPDKNEGVQKDAISIEGDRIK
TSESNNLACIQAKDRITGRIEIAACVKVAEVSQIRITNKEEVPFHGINLAVGAELSLPVV
YLDALGNPFYEAYGAVLFDVVTDSPDVVSINKNNTHGGSRNIHLKAMQHGRALVRISIYR
IPQKSDYILISVGAHIHPQNPVLHIGSHLNFSIEGLNDKVSGQWSTANGSVISVSPLSGV
AEVVGEGTTQVFFEASSLKLRTAVIVLTEDIVSVDAPRETLTNVPLPTKGYNFSVKISNN
YDKFKALGNTKGLQYDCRVDPPFVGYAKPWLDLDTGNSYCLFFPYSPEHLVRLIPKSKDM
KPDISVSINASLRGADHVSGSASALFVGGFSILEMGKDSMQLNLTPYSNKTIITILGNID
VEIYWHERESLIITRIHTEGFGIGGRAKYEVKMLGAKRFTDTIFITLPVNGQSVEIDVSC
DPGERTASETTINYTLWTTVLGCLALLILTVVVSICYLDRLGRSPQTSINVPATPSIAAP
VTPARSSPAIGSESPRTPQPFIDYVRRTIDETPNYRREPRRRLFFLXFRRKIFIGGLARE
TTTAQFIKHFGKYGEIIDSVIMKDRKTGQPRGFGFVTYADPSVVDKVIDETHVINGKQVE
IKRTIPRGAMGSKDFKTKKIFVGGIPTTVNEDEFSDFFSQFGEVKEHQIMRDHSTGRSRG
FGFITFDTEQSVDELLDKGNKLEFAGAQVEIKKAEPKKPNLPAAPSKRYSDSRPAYGGGY
GDSYGGFGGGGYGAAGGYRSTAAYGGRGGSAYGGYGGSEFGGYGVYGGGGGGGGIGAYRG
ESSIGYSGRYGGAYSRGYDLGGGYGGAGESYGGYGSAGGAAGGGYGSGYDAGFGGGYGGG
SGASFYGSRGGYGGAGSGRYHPYGR
NT seq
6918 nt
NT seq
+upstream
nt +downstream
nt
atgttgagctacactgtattgctcggtttatttcttcttctcatggtggaccaaacggcg
tcgcatttgagctctggtccacacattgcagacgtcaatattctgctgcctcccaaaatg
actcatccggtcgagtataggcttcagggaagtgatggaattgatgtttctggtaaaacg
tcatgggatcatcacgatattctgtctgttctgcccgaatataattcaactagtcactgc
tcaacaagtgcgcggttgagatcaattgctccttatagtggtcgaaaggagactgctgtt
tacgctgctgatgtaaatactggagctgtgattcgctgcaaagtgtttattgacaaactt
tccagaattcagatatttcataattccattaagcttgacttagatgggcttgccacgctt
cgagtccgtgcctttgatagtgaagaaaatgtgttttcgtcactggtgggcttgcagttt
atgtggcagctgatgcctgaacctaatgtattgcctcatcaccttgttcatgtccctcta
aaggactctcccctgagcgactgtggcgggttgtgtggagacctagatatccaaataaac
cttgaagataatggtgtattttctgatctgtacgtcgtaaagggaattgaaattgggcat
gagattgtttctgtgcatttgcttgagcctcagttcaagcacatgactgataagattgtt
ctaactgtagcagaagccatgtcgctagatcctccctcacctgtttttgtccttgttggt
gcagctgttcattatagtctaataattatccgtggcaaccaagctcaagttgtaaatttg
ccgtctccacatcatcgatggtctgtttcaaactcttcagttgctcgtgttgactctatg
atgggcttggcatatgcgttgaacttaggggtaactaacaccatagttgaagatacaagg
gttgctgcccacatacaagtgtcgtcacttaatgttgtcctgccagattctttatcttta
tacatgacacctctatctacttctggtgatcctgttgaaggaattaaagcaattccatcc
atgacacgttggtatggtgtttctggtcgtcgttacctcattcaaatgaaggttttctca
gaaggaccagatgcacaagaaatctacattacagagagtgatgacgtaaagttgtccaat
aaccagtctgattactggagactttttcctgtatcagatgatattgcaatcaaacatggc
tggcagaattctctaattctaaaggcaacttcacagggacaggataaattgacagcttct
ttgacttactttagtgggctaaatgagacaaaggaggttctcaaggttgcacaagaagtc
atggtttgtgatcaagtcaagtttagtttggataaaagtgcatctccaaccattttcctt
ccctgggcccctgctatttatcaggaggtggagctacaggctacaggaggttgtgctaag
gcatccagtgactacaaatggttctcttcagacatgggtattgtgtctatgtctgcttct
ggggttgtccaggctaagaagcctggtaaagctactattaaagtgctctccatatttgat
tcattcaattatgacgaggttgtcgttgaagtttccgtcccagcatctatggtcatgctc
cttaacttccctgttgagactgttgtaggaacacatcttcaagctgctgtaacaatgaaa
gcatcaaatggtgcctacttttatagatgtgatacgttcagttccttcataaagtggaaa
gcaggcagtgagtctttcattattgtcaatgcaacaggggagtcccctgctttagacagt
ttaggaaatgccgacttccatgcatcaaattatggtcccccatgttcatgggcatatata
tatgcctctgcttctggccgggctactcttcatgctacattatcaaaagaatatcacaac
tttgatagctcttttggtggacctattgtcttaaaagcatcttcacttattgcggcatac
tcaccgcttagcattcgtcaggcaggtgatggaaaccatttcggtggctacttttttgat
ctggctctagcagaaactgataagcaattggtaaagttggacaaaatataccttgtccat
gggacgcatttggatgttatgcttcttggtggacctgaaaagtggaacaatggttggaac
aatggtgttgactttgttgaaactatggaaatcttaaatgaacaacatggtcacattgac
aatggtgcttctgtggaaaggttatatgaaagctataagggtttgtacagaatttcatgc
caaatgctgggaacctataaaattgttttcaaacgcggtaatctggttggggatggccat
cctctgcctgcagtagcagaagttccactgtctcttatatgtagcattcctgcttcaatt
gttctgatagtggatgaatatgtaaatgaacgtgaagtcatacagactgcaattcaagct
gaccgcagttcagggcgaattcgtgtcacccctgctactgtggcaaatgggcgcaccatt
agattagctgcgattggcattagtaactctggagaagcttttgcaaactcatcttctctt
tatttaaggtgggaacttatcagttgtaatgagatggctaaatgggatgatgctgataat
ttagagaggtcggagcacagttgggagaggttattgagcttgaaaaacgagtcaggcctg
tgtacagttcgtgctactgccattggtttcagagataacatgggcggtcataagtctgtt
ccattgcttgatagttcagaaaatgttcttgcagatgcaattcgtctacagctagtttct
acgctaatggtcagcccagagttcaatctggtgtttttcaatcccaatgctaagttaaat
ctgtcaattactggagggagctgtttcttggaagctgttgtgaatgattctcgagtgcta
gaagtcgttcaacccccaagaggtttacaatgctcacaactgatgctgtctcctaaaggt
atggggacggcgcttgtgacagtttacgatgttggacttgctcctccacttgcagcttct
gctgtggtacaagttgtagacattgactggataaagattgtgtcaccagaagaaataagc
cttatggaagggacgtcgcagactattgatttgatggctgggattagtgatgggaggact
tttgactcttatcagtttgcttacatgaatattcatgtgcatgttgaggatcatattatt
gaggtgttagacattaatgatatctcaagcccaggaggtggatacgttaatgtcccaaaa
tttaagattttggctacacatcttgggatcacaactttctttgtgagtgctgcacagcaa
tctgggcatgaaattttgagtcaaccaataatggtggaagtgtatgcaccaccaataatt
cacccacaagacattttccttgtacctggtgcagcctatgtgcttactgtgaaaggaggc
ccaacagttggtgtatatgttgaatatatgagcatgaatggtgaaatagcgacaatgcat
agatcttcaggacgactgtctgccatttcacctgggaacactactattcgtgccacggtc
ttcagaaatggagataccgtgatttgtgaagcatatggcagtgttaaagtaggagttcct
tcttcggtgatattgaatgcacaaagcgaactgcttggtgttggccgtgagatgcctata
tatcctttgttttcggagggcgatttgttttctgtttatgagctctgccaaaattaccag
tggactgtagaagatgacaaggtattgagctttaatttgttagagcatttgaatggtgag
aagtatgggactcagttggatccttcagaaaaaattcagttccctagccatatgagtgag
gaagagcttggttttatcaaagtaatgtttggaagatctgcagggaggaccaacattgca
gtctcgttctcatgtgaatttatatcttctggttctaaatcatggagaagattttacaat
gcatctttatcaatattggtggtgcctgatctccctcttgctcttggagtcccaataacg
tgggttcttcctcctcattatactacaacaagtattttaccttcatcttcagaatcatat
ggccaaagggatagtcagagtcacaaaggaactattatctattccttgttaagaaatttc
cctgacaagaatgaaggtgtgcaaaaggatgctatttccattgaaggggacagaataaag
acatcagagagtaacaatcttgcatgcattcaggcaaaagatcgtatcacgggtagaatt
gagattgctgcttgtgtcaaagttgctgaggtgtctcaaataagaattacgaacaaggag
gaagtaccatttcacgggattaatcttgctgttggtgctgaactttctcttccagtagtc
tatcttgatgcactaggaaaccctttctatgaagcatacggtgctgttctctttgatgtt
gtaaccgactctccggatgttgtgtccataaacaaaaacaacactcatggtggcagtaga
aatatccatcttaaggcaatgcagcatggtagagctcttgtgcgaatatccatttatcgt
attcctcagaagtcggactatatcctgatatcagtgggtgcccatatacatcctcaaaac
ccggttcttcatataggaagtcatcttaacttcagcattgaaggtttaaatgataaagtt
tctggccagtggagtactgccaatggaagtgttatatctgtgtccccattgtctggagta
gctgaagtagtgggggaaggtacaacccaagtattttttgaagcttcaagtttgaagctg
cgaacagctgttatagtgctaacagaggatattgtatctgtggatgctccaagagagaca
ctaacaaatgttcccctccctaccaaaggatataacttctctgtgaagatcagcaataat
tacgacaagtttaaggctcttggaaacaccaagggactccagtatgactgtagagtggac
ccgccttttgttgggtatgcaaaaccatggttggatcttgataccggtaactcatactgc
ctctttttcccttactcaccggagcatttggttcgtttgatacccaagtccaaggatatg
aaaccagatatatctgtttccatcaatgcttcattgagaggagctgatcatgtttcagga
tctgcttctgctctttttgttggagggttttccatattggagatgggcaaggattcaatg
cagttgaatctgaccccatactctaacaagactattataacaatcctgggcaacatagat
gttgaaatttattggcatgagcgggagtcattaatcattactcgcatccatacagaaggt
tttgggattggtggacgtgcaaaatatgaggtgaaaatgctgggagccaaaagattcaca
gatacaattttcatcacactcccagtcaatggtcagagtgtggaaatcgacgttagctgt
gaccccggagaaagaacagcatctgaaactaccattaattataccctttggacaacggtg
cttggatgtcttgctctattgattttgacagtggttgtctccatatgttatttggacaga
ctgggtagatctccccaaacatctattaatgttcctgctactccaagtattgcagcccca
gtcacacctgcacgtagcagcccagctatcgggagtgaatctccccgaacacctcagcct
ttcatagattatgtaaggagaacaatagacgaaacccctaactacaggcgagagcctcgg
aggaggttattttttctgtaattccgtaggaaaatctttatagggggtttggccagagag
acaactacagcgcaatttataaagcatttcggcaaatacggtgaaattatagattcggtg
ataatgaaggaccggaaaacggggcagccccgtgggttcggttttgtgacctatgcagac
ccctctgtcgttgataaagtcattgacgaaactcatgttatcaatggcaaacaagtggaa
atcaagcgcacaataccgaggggagcaatggggtctaaggatttcaagactaagaagatt
ttcgtgggtggaattccaacaaccgttaatgaagatgagtttagtgacttcttttcacag
tttggagaggtcaaggagcatcagattatgcgagaccactccaccggtcgctcccgtggc
tttggatttattacctttgacacagagcaatcagttgacgaactcttggacaaggggaac
aagcttgagttcgctggagctcaggtggagattaaaaaggcagagccaaagaagccaaac
ctacctgcagccccatcaaaacgttacagcgattctcggcctgcatatggtggtgggtat
ggagatagctatgggggatttggaggtggcggttatggcgctgctggtggttataggtca
actgcggcctatggtggtaggggaggtagtgcatatggaggatatggtggcagtgaattt
ggcggctatggagtatacggaggcggtggtggtggtggcggtataggggcttatagggga
gaatcatccataggatactcgggccgttatggaggagcctatagcagaggttatgatcta
ggaggcggttatggtggagctggcgagagttatgggggatatggaagtgctggtggtgca
gctggtggtggttacgggagtggttatgatgcaggttttggaggtggctacggaggtggt
agtggagcttccttttatggtagtagagggggatatggtggtgcaggtagtggtcgatat
catccatatgggaggtag
DBGET
integrated database retrieval system
