KEGG   Prunus avium (sweet cherry): 110757475
Entry
110757475         CDS       T05161                                 
Name
(RefSeq) ABC transporter I family member 21
  KO
K12608  CCR4-NOT complex subunit CAF16
Organism
pavi  Prunus avium (sweet cherry)
Pathway
pavi03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:pavi00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    110757475
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pavi03019]
    110757475
Messenger RNA biogenesis [BR:pavi03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Ccr4-NOT complex
     110757475
SSDB
Motif
Pfam: ABC_tran AAA_21 AAA_29 ORC-CDC6-like nSTAND3 NACHT AAA_28 AAA AAA_15 AAA_23 SMC_N AAA_18 AAA_22 PduV-EutP AAA_5 Zeta_toxin AAA_25 SRP54 AAA_24 Arf AAA_33 AAA_30 AAA_14 ATP-synt_ab AAA_7
Other DBs
NCBI-GeneID: 110757475
NCBI-ProteinID: XP_021814780
UniProt: A0A6P5SCY7
LinkDB
Position
Unknown
AA seq 301 aa
MAGRVSETSNPRAEGEGETSSGIRVHGMQFSYDAQPPLFCDFNLNIAPGSRCLLVGANGS
GKTTLLKILAGKQMVGGRDVVRVLNCSAFHDTHLVCSGDLAYLGGSWSKSVGSAGELPLQ
GDFSAEHMIFGVEGTDPVRRDKLIELLDINLQWRMHKVSDGQRRRVQICMGLLHPFKVLL
LDEVTVDLDVVARLDLLDFFKEECEQRGATIVYATHIFDGLETWATHLAYIQDGELKRAE
KLSEVNELKSSANLLSVVESWLRAETKHEKKKSTNPPAQTQKTSPFATSPFMSSRHMAYY
R
NT seq 906 nt   +upstreamnt  +downstreamnt
atggcgggcagggtcagtgaaacctccaatccgagagcggaaggagaaggagagacgtcg
agcggtattagagtccatggcatgcaattctcgtacgatgcacaacccccgctgttctgc
gatttcaaccttaacatagcccccggatcgcgatgccttctcgtcggcgccaacggatct
ggcaagaccactttgctgaagattctagcagggaagcagatggtgggagggagagatgtg
gtgcgggttttaaattgttcggcttttcatgacactcatttggtttgcagcggcgattta
gcttacttgggaggctcgtggagtaaatctgttggctctgctggagaacttccattgcag
ggagatttctcagctgaacatatgatatttggagttgaagggactgatccagttaggaga
gacaagttgattgagctgcttgatataaacctccagtggcgaatgcataaagtatctgat
gggcaacgacgtcgagtccaaatctgcatggggcttcttcatcctttcaaggttctcttg
cttgatgaggtaacggtcgacttggatgttgttgccagactggacttattagatttcttc
aaggaagaatgtgaacagagaggagcgacaattgtttatgcaacccatatttttgatggg
ttggagacatgggcaacccatctggcttacatccaagatggtgagctaaagagggctgag
aagttatcggaggtcaatgagttgaagagttcggccaatctgctctctgttgttgagtct
tggctccgtgctgaaaccaagcatgagaaaaagaaatccacaaatcctcctgcccaaact
caaaagacctctccttttgctacatctccatttatgtcatcaagacacatggcatattac
cgctga

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