KEGG   Prunus avium (sweet cherry): 110763872
Entry
110763872         CDS       T05161                                 
Name
(RefSeq) sm-like protein LSM3B
  KO
K12622  U6 snRNA-associated Sm-like protein LSm3
Organism
pavi  Prunus avium (sweet cherry)
Pathway
pavi03018  RNA degradation
pavi03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pavi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    110763872
  09123 Folding, sorting and degradation
   03018 RNA degradation
    110763872
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pavi03019]
    110763872
   03041 Spliceosome [BR:pavi03041]
    110763872
Messenger RNA biogenesis [BR:pavi03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     110763872
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     110763872
Spliceosome [BR:pavi03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    110763872
 Complex C
  U2 snRNP components
    110763872
SSDB
Motif
Pfam: LSM TIG_SUH
Other DBs
NCBI-GeneID: 110763872
NCBI-ProteinID: XP_021822444
UniProt: A0A6P5T5N0
LinkDB
Position
Unknown
AA seq 97 aa
MASEEESAVKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILGDVEEVVTSIE
IDDETYEEIVRTTKRNVPFLFVRGDGVILVSPPLRTA
NT seq 294 nt   +upstreamnt  +downstreamnt
atggcgagtgaggaagagagcgccgtgaaggagccgttggatctgataaggctcagcctc
gacgagcgcatctacgtcaagctccgctccgaccgtgagctccgcggtaaactccatgct
tatgatcaacacttaaatatgattcttggtgatgttgaagaagttgttacttctatagaa
attgatgatgaaacttatgaagagattgtccggactacaaagcggaatgttccttttctc
tttgttagaggagacggtgtcatccttgtttcacctcctctgaggactgcttga

DBGET integrated database retrieval system