Prunus avium (sweet cherry): 110766062
Help
Entry
110766062 CDS
T05161
Name
(RefSeq) ABC transporter I family member 20
KO
K12608
CCR4-NOT complex subunit CAF16
Organism
pavi
Prunus avium (sweet cherry)
Pathway
pavi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pavi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
110766062
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pavi03019
]
110766062
Messenger RNA biogenesis [BR:
pavi03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
110766062
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
AAA_21
AAA_29
AAA_15
AAA_25
Arf
AAA
AAA_23
ORC-CDC6-like
AAA_30
nSTAND3
AAA_7
Zeta_toxin
TsaE
AAA_28
Motif
Other DBs
NCBI-GeneID:
110766062
NCBI-ProteinID:
XP_021825012
UniProt:
A0A6P5TD21
LinkDB
All DBs
Position
Unknown
AA seq
322 aa
AA seq
DB search
MGVKLNSGPTIEINGLKFTYPGINGHPPPGSKPLIEDFNLTLNAGDRCLLVGSNGAGKTT
ILKILGGKHMVEPHMVRVLGRSAFHDTALTGSGDLSYLGGEWRRDVAFAGFDVPIQMDVS
ADKLINGVSGVDPQRRAELIKVLDIDLSWRLHKVSDGQRRRVQICMGLLKPYKVLLLDEI
TVDLDVLARADLLKFLRKECEERGATIIYATHIFDGLEDWPSHIAYVANGKLQLALPMDR
VKEMYKLSLMRTVESWLRKERDEERKRRNERKAKGLPEFEQQNEGSGGDVRAVNNGWAAG
RLNSTIAGEENFVFSSNRVLRQ
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgggtgtgaagctcaactccggaccaacgatcgagatcaacggcctcaaattcacctac
ccaggaatcaacggccatcctccaccgggctccaagcctctgatcgaggacttcaacctc
accctcaacgctggcgatcggtgcctcctcgtcggatccaacggcgccggcaaaaccacg
atcttgaagatcttgggaggcaagcacatggtcgagccccacatggttcgcgtgctcgga
aggtcggcgtttcacgacaccgccttgaccggctccggcgacctctcctatctcggcgga
gagtggaggcgagatgtggcttttgccgggtttgatgtcccgatacagatggacgtttcg
gccgataagttgatcaatggggtatcgggggtcgacccacaaaggagagcagagctaata
aaggttctggatattgatctctcatggaggctgcacaaagtctccgatggtcagagaaga
cgagtacagatctgcatgggcctgctcaagccatacaaggttcttctgcttgatgagata
actgtggaccttgatgtgctagcaagagctgaccttctcaagtttttgagaaaggaatgt
gaagagagaggcgccacaatcatttatgctacacatatatttgatgggttggaggattgg
ccttcacatattgcttatgtagcgaatggaaagttgcagctagctttgcccatggatagg
gttaaggagatgtacaagttgtcactcatgagaacagttgagagttggctgaggaaggaa
cgtgatgaagagaggaagagaagaaacgagagaaaggcaaagggccttcctgagtttgag
caacaaaatgagggaagcggcggtgatgttcgtgcagtgaataatggctgggcagccgga
cgcttgaattccaccattgccggagaagagaactttgtcttcagctcaaatagagttctc
aggcaatag
DBGET
integrated database retrieval system
