Prunus avium (sweet cherry): 110770588
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Entry
110770588 CDS
T05161
Name
(RefSeq) transcription factor PIF3 isoform X1
KO
K12126
phytochrome-interacting factor 3
Organism
pavi
Prunus avium (sweet cherry)
Pathway
pavi04075
Plant hormone signal transduction
pavi04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
pavi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
110770588
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
110770588
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pavi03000
]
110770588
Transcription factors [BR:
pavi03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
110770588
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HLH
bHLH_SAC51
bHLH_LHW
Motif
Other DBs
NCBI-GeneID:
110770588
NCBI-ProteinID:
XP_021830447
UniProt:
A0A6P5TTJ6
LinkDB
All DBs
Position
Unknown
AA seq
728 aa
AA seq
DB search
MPLSELYRMAGRVDSSQDFEPVNDFVELVWENGQIMMQGQSSRTRKSPTCNNSLPSYNPK
NRDKDVGNGNIAKTGKFGSVESVLDEIPLSVPSSEMGLSEDDEMLPWLNYSIDEPLHHEY
CHEFLPELSTVTANEISSNSNLASMDKRSSSSQVYRDSNTNSAHEGAYLEQRNAPKVTSI
DGADVSRPRTGTSQFYPLSSQQSQSLFPSFRSRVSDIVGDNTGSATHPTVCKNSTQVSSA
GVFPGIKMQRQDPVMPSNNNSSVVNFSHFSRPAALVKSNLQSIGAVAGSGLSSMERIGTK
GKVSAATSNNPPETTLIDSSSGLAKESNSQCQHITGTSNVELKPTEAKPLEESCAAKQSE
AACQEDTSKNDTNTNHIPCESANRVLRDGEKTLEPVVASSVCSGNSVERASDDPTHALKR
KSRDTDESECHSDDVEEESVGVKKIAHARGMGSKRSRAAEVHNLSERRRRDRINEKMRAL
QELIPNCNKVDKASMLDEAIEYLKTLQLQVQIMSMGAGLYMPPMMFPAGMQHMHAPRMAH
FSPMGLGMGMGMGLGMGFGMGMPDMNGGSSGYPMLQVPPMQGAHFPNSPMAGHAFNGMIG
SNLQMFGLPGQGVPMPMQRPPLVPSSGGPFMKSSVGLNACGAGGPMENAESAPVSGSKDS
VQNMNSQVVQNTNANSSMNQTSSQCQATNEGFVQPALVRNNVQAADVDNNRANRSSNGND
VVLSRTAS
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atgcctttgtccgagctttatcggatggccgggagggttgattcaagtcaagattttgaa
cctgtaaatgactttgttgagctagtatgggaaaatggtcaaattatgatgcaaggccag
tctagtagaactagaaagagtccaacttgtaataatagcttaccttcttacaaccccaag
aatcgagataaagatgtaggaaatggcaacattgcgaagacagggaagtttggatcggtg
gagtctgtattggatgaaattccgttgtcggtgccatcttccgaaatgggtttgagtgaa
gatgatgaaatgttgccttggttgaattattccattgatgaacctttacatcatgaatac
tgtcatgaatttttgcctgaattatccactgtcactgcaaatgagatttccagcaatagc
aatcttgcctcaatggataaaaggagtagttctagtcaggtatatagggactccaatacc
aactctgcacatgaaggtgcttatttggagcaaaggaatgcgccaaaggttacttcaata
gatggtgctgatgttagcagacctagaactggtaccagtcaattttacccattatcatca
cagcaatcccaatcattatttccatctttcagatcaagggtttcggatattgttggtgat
aatacgggtagtgccacccatcctactgtttgcaagaattcaactcaggtttcatccgca
ggtgtttttcctggcataaaaatgcagaggcaagatccagtaatgcctagtaataataat
tcatccgtagtgaacttttcccatttctcacgaccagctgctcttgtgaaatctaatctt
cagagcattggtgcggtggctggctcgggtttatcaagcatggaaaggattggaactaag
ggcaaggtttcagctgcaactagtaacaatcctcctgagacaactctaatcgattcaagc
agcggtttagcaaaggagtcaaattcacaatgccaacatattacagggacatccaatgtt
gaattgaaaccaacagaagctaagcctcttgaggaatcatgtgctgctaaacagtctgag
gcggcatgccaagaggatacctctaagaatgacacaaacaccaatcatattccttgtgaa
agtgcaaatagggtacttcgggatggtgaaaaaactttggagcctgtcgttgcttcttct
gtttgctcaggcaatagtgtggagagagcttcagatgacccaacacatgctttgaagaga
aaatctcgtgatactgacgagtctgaatgccatagtgacgatgtggaggaagaatctgtg
ggggtgaaaaaaatagctcatgctcggggcatgggttcgaagagaagcagagcagcagaa
gtgcataatttatcagaaaggaggcgaagggatagaatcaatgagaagatgcgtgctcta
caagaactcatacccaattgcaataaggtggacaaagcttcaatgcttgacgaggctatt
gaatatttgaagacacttcagctccaagtacagattatgtcaatgggagctggtttgtat
atgccaccaatgatgtttccagcaggaatgcaacacatgcatgcaccccgtatggctcat
ttctcgcccatgggtcttggaatgggaatggggatgggattaggcatgggttttgggatg
ggtatgcccgacatgaatggtggatcttctggttaccctatgcttcaggtgccccccatg
caaggagcacatttccctaattcacctatggcagggcatgccttcaatgggatgatagga
tctaaccttcagatgtttgggcttcctggtcaaggagttcccatgccgatgcaacggccg
cccttagttccttcatcaggaggtccctttatgaagtcatctgtaggactaaatgcatgt
ggtgcaggaggccctatggaaaatgcggaatcagctccagtttctggttcaaaggattca
gttcagaacatgaactctcaagtcgtgcaaaacaccaatgccaatagctctatgaatcag
acatctagtcagtgccaagcaactaatgagggctttgtacagcctgctttggtgcgtaat
aatgttcaagcggccgatgttgataacaacagagctaacagatcttctaacggaaatgac
gttgtgcttagtagaacagctagttaa
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