Pseudomonas avellanae: BKM03_22515
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Entry
BKM03_22515 CDS
T05369
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
pavl
Pseudomonas avellanae
Pathway
pavl03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pavl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BKM03_22515 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pavl03400
]
BKM03_22515 (nth)
Enzymes [BR:
pavl01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
BKM03_22515 (nth)
DNA repair and recombination proteins [BR:
pavl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
BKM03_22515 (nth)
Prokaryotic type
BKM03_22515 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
Ogg-HhH
EndIII_4Fe-2S
RecR_HhH
HHH_5
HHH_8
Motif
Other DBs
NCBI-ProteinID:
AVB21668
UniProt:
A0AAD0E328
LinkDB
All DBs
Position
4696344..4696982
Genome browser
AA seq
212 aa
AA seq
DB search
MNAAKRQEIFRRLHEDNPDPKTELAYTTPFELLIAVILSAQATDVSVNKATARLYPVANT
PQAIYELGVEGLSEYIKTIGLYNSKAKNVIETCRMLVELHNGEVPDTREALEALPGVGRK
TANVVLNTAFRQIAMAVDTHIFRVSNRTGIAPGKNVVEVEKQLMKFVPKNYLLDAHHWLI
LHGRYVCQARKPRCGSCRIEDLCDFKDKTSDD
NT seq
639 nt
NT seq
+upstream
nt +downstream
nt
atgaacgccgcaaaacgtcaggaaatctttcgcaggctgcatgaggacaatccggaccct
aaaaccgaactggcctacaccacacccttcgagttgctgatcgccgtgattctttcggcc
caggcaactgacgtcagcgtcaacaaggccacggccaggctttacccggttgccaacaca
ccgcaggcgatctacgaactgggcgtcgaggggctgtccgaatacatcaagaccatcggc
ctctacaacagcaaagccaaaaacgtgatcgaaacctgtcgaatgctggtggaactgcac
aacggcgaagtgcccgacacccgagaagcgctggaggcgttaccgggcgtaggacgcaaa
acggccaatgttgtgctcaataccgctttccggcagatcgccatggctgtcgacacgcac
attttccgcgtcagcaaccgcacaggcattgctcccggaaaaaatgtggtggaggtggag
aagcagttgatgaaattcgtgccgaagaactatctgctcgatgcccatcactggttgatt
ttacatggacgctacgtttgccaggcgcgcaagccccgctgcggcagttgccgcatcgaa
gacctgtgtgatttcaaggacaagacttccgacgattga
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